EY675024

Overview
NameEY675024
Unique NameEY675024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1021
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY675024 vs. ExPASy Swiss-Prot
Match: ERG25_DANRE (C-4 methylsterol oxidase OS=Danio rerio GN=sc4mol PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.135e-12
Identity = 48/166 (28.92%), Postives = 83/166 (50.00%), Query Frame = 1 
Query:  145 WRYLITHFSDFQLACLGSFFLHESIFFLAGLPFIYLERAGWLSKYKIQ-TKNNSPAAQEKCITRLLLYHFGVNLPVMIFSYPVFKYMGMQSSL-PLPSWKVVLSQIIFYFILEDFVFNWGTSHTTHEMVGTNTFTVSHHEYATPIWGSHLKYAHPG*KTGSLGFGY 636
            W +++ +++ FQ+A  GS  +HE I+FL  LP    +   ++ KYKIQ  K  +   Q KC   LL  HF + LP++  +Y   ++  +      +P W  +L+Q     ++ED  +++      H           HH++ +P +G   +YAHP  +T  LG G+
Sbjct:   37 WNHMLQNYTKFQIATWGSLIVHELIYFLFCLPGFIFQFLPFMQKYKIQPDKPETWEKQWKCFKMLLFNHFCIQLPLICGTYYFTEFFSIPYDWDTMPRWPFLLAQCFGCAVIED-TWHYFLHRALHHRRIYKYIHKVHHDFTSP-FGMQAEYAHP-LETLILGAGF 199
[Close]
BLAST of EY675024 vs. ExPASy Swiss-Prot
Match: ERG25_SCHPO (C-4 methylsterol oxidase OS=Schizosaccharomyces pombe GN=erg25 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.807e-11
Identity = 48/161 (29.81%), Postives = 77/161 (47.83%), Query Frame = 1 
Query:  127 SIIESGWRYLITHFSDFQLAC-LGSFFLHESIFFLAGLPFIYLERAGWLSKYKIQTKNNSPAAQE-KCITRLLLYHFGVNLPVMIFSYPVFKYMGMQSSLPLPSWKVVLSQIIFYFILEDFVFNWGTSHTTHEMVGTNTFTVSHHEYATPIWGSHLKYAHP 603
            + +E  W      F +  +A  L SF LHE I+F   +P++ ++   +  ++KIQ K     A++ +C   +LL HF V LP +    P+    G+ +S+P P    ++ QI  +F LED    W      H  +        HH Y+ P +G   +YAHP
Sbjct:   28 NFVEQLWLAYYKWFDNDVVATGLMSFLLHELIYFGRCIPWMIIDAMPYFRRWKIQPKKVPTLAEQWECTRLVLLSHFTVELPQIWLFDPMCATFGLSTSVPFPPVTKMIWQITLFFFLEDTWHYW-AHRLFHYGIFYRFIHKVHHRYSAP-FGLSAEYAHP 186
The following BLAST results are available for this feature:
BLAST of EY675024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ERG25_DANRE2.135e-1228.92C-4 methylsterol oxidase OS=Danio rerio GN=sc4mol ... [more]
ERG25_SCHPO1.807e-1129.81C-4 methylsterol oxidase OS=Schizosaccharomyces po... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-A01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675024 ID=EY675024; Name=EY675024; organism=Citrus sinensis; type=EST; length=1021bp
CTTGTTGCTTCTCAATACAACTTCCACTCCTCCAGTCTTACTAAGGGTCT
TACTCCATTGACAAAACAAGCCTTTGAATTACTCAGCCACATTTGCTGTC
TCTGCCAGGGATCGAGTTTCATGGCTTCGATCATTGAATCTGGTTGGAGG
TATCTCATCACACATTTCAGCGATTTTCAACTGGCGTGTCTAGGAAGTTT
CTTTCTTCATGAAAGCATCTTTTTCTTAGCTGGACTTCCTTTTATATATC
TTGAGAGGGCAGGATGGCTGAGCAAGTACAAAATTCAGACAAAAAATAAT
AGTCCTGCAGCCCAGGAGAAATGCATTACTCGACTACTGCTGTATCACTT
TGGTGTGAATTTACCTGTCATGATTTTCTCCTATCCTGTCTTCAAATACA
TGGGGATGCAAAGTAGTCTTCCTCTGCCGTCCTGGAAAGTGGTTCTATCA
CAAATAATATTCTACTTCATCCTGGAAGATTTTGTTTTCAACTGGGGGAC
ATCGCATACTACACACGAAATGGTTGGTACAAACACGTTCACAGTGTCCC
ATCATGAATATGCAACACCCATTTGGGGCTCCCATCTGAAATATGCTCAC
CCTGGCTGAAAAACTGGTTCCCTTGGCTTTGGCTACCCTATGGTCGGCCC
TGGCCATCACTGGGGCCCCAATTTAATAACTCCCCGGGTTGGGGGAAGGG
GGGGTCAAAAAAATTGGGAAAAAATGGTTAAGGACACTTGGGGGTTTACC
CTTTTTCCCCAGGGGAACCCCCCCAAAAATTTATAACCCTTTGAGTAGGG
GGGGGGGGGAATTTTCTGGGAAGAATACATCTCATCTATTTGGGCTTTGA
AGGAAAAAATGGGGGGAATTTTAATTCCCCAAAAATTTTTTTTTTTTAAA
CAGGGGGGAGGGGGAAATATTTCGGGGGAAGAAGGAAAGAGGGGGGGACT
AACACAAAAAAAAGACATACAAAAAAACAACACATAAAAAAGATGAGAAT
TTTTGTTTGTGAGGAGAGAGT
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