EY685701

Overview
NameEY685701
Unique NameEY685701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685701 vs. ExPASy Swiss-Prot
Match: FUT9_ARATH (Probable fucosyltransferase 9 OS=Arabidopsis thaliana GN=FUT9 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 9.723e-47
Identity = 94/205 (45.85%), Postives = 121/205 (59.02%), Query Frame = 3 
Query:   54 PNKDSVFHFLGRYLFHPTNPVWGLITRYYDAYLARADERIGIQIRVFDTGVGPFQYVLDQILACTLKENLLPKVDKEKAIIRQSGNQTSKAVILTSLSSGYFEKMRDVYWEYPTVTGEVIGIYQPSQERYQQTEKHTHNRKAWAEMYXXXXXXXXXXXXXXXFGYVAQSLGGLRPWILYKPENHTAPDPPCHRAMSMEPCFHAPP 668
            P K++VFH L RYLFHPTN VWG++TR Y+AYL+RADER+GIQ+RVF   VG FQ+V+DQIL                                      Y + +++++ E  + TGE I +YQPS E+ QQT+K  H++KA AE+Y               FGYVAQ LGGL+PWILY+P +   P+PPC RAMSMEPCF   P
Sbjct:  274 PQKETVFHHLARYLFHPTNQVWGMVTRSYNAYLSRADERLGIQVRVFSKPVGYFQHVMDQIL--------------------------------------YSDHLKNMFLEQASSTGETIEVYQPSGEKIQQTDKKLHDQKALAEIYLLSLTDELVTSTRSTFGYVAQGLGGLKPWILYEPRDKKTPNPPCVRAMSMEPCFLRAP 440

HSP 2 Score: 23.483 bits (49), Expect = 9.723e-47
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 
Query:   13 FLIPSFEQELSNLFPTK 63
            ++IPSF+ +L  LFP K
Sbjct:  260 WMIPSFQTKLIKLFPQK 276
The following BLAST results are available for this feature:
BLAST of EY685701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
FUT9_ARATH9.723e-4745.85Probable fucosyltransferase 9 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-025-A10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685701 ID=EY685701; Name=EY685701; organism=Citrus sinensis; type=EST; length=706bp
CCACGCGTCCGCTTCTTGATCCCATCATTTGAGCAAGAACTCAGTAATCT
CTTCCCAACAAAGACTCTGTTTTCCACTTCTTGGGTCGGTATCTCTTCCA
CCCCACGAATCCGGTCTGGGGACTCATTACCAGATACTATGATGCATATT
TAGCTAGAGCAGATGAAAGAATAGGCATCCAGATACGAGTCTTTGATACT
GGTGTTGGTCCATTCCAATACGTGTTGGATCAGATCCTAGCTTGCACCTT
GAAGGAGAATCTGCTCCCCAAAGTTGACAAGGAGAAAGCCATCATCCGTC
AGTCTGGGAATCAGACATCTAAAGCAGTAATCTTGACATCTTTAAGCTCT
GGTTACTTTGAGAAGATGAGGGACGTGTACTGGGAATATCCGACTGTGAC
AGGAGAAGTGATAGGCATTTACCAGCCAAGTCAAGAAAGATATCAACAGA
CTGAAAAGCACACACACAACAGGAAGGCATGGGCAGAAATGTATCTATTG
AGCTTGACTGATGTATTGGTCACAAGCTCATGGTCGACATTCGGATATGT
GGCTCAGAGTCTAGGAGGATTAAGGCCATGGATCCTTTATAAGCCTGAGA
ATCATACTGCTCCTGATCCCCCCTGTCATCGAGCCATGTCAATGGAGCCT
TGTTTCCATGCCCCTCCCCTTTTATGATTGCAAGGGCTAAAAGGGGGAAT
GGACCC
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