EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.820e-13
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1
Query:   63 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLAR---------DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 404
            MG   E + K   I R  QD   L SHQ    A  +G F D I P +G            D  +R DT+LE LA L PA++ + GT+TAG S+ +TDGAS +++ S   A + G+  LA +R+
Sbjct:  151 MGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQGYDENGFLKVFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRS 273          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.820e-13
Identity = 54/139 (38.85%), Postives = 74/139 (53.24%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLARDNNL---------RADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P L RN     G+ MG   E +A+   I R  QD     SH R  AA + G F + I P  G   D  L         R +T++E LA L PA+D  +GT+TAG+S+ L+DGA+ +L+ SE+ A E GL   A +R+
Sbjct:  132 FHPGLSRNVAKAAGM-MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTMEALATLRPAFDPVSGTVTAGSSSALSDGAAAMLVMSESRARELGLKPRARVRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 7.602e-13
Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = -1
Query:   63 LSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD--------LISPYRG------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 410
            L MG   E +A+R+ + R  QD+  + SH++  AA   G F D        L+ P  G      ++ D+ +R  T+L  L  L P + +++GT TAGNS+ ++DGA  VLL   + A ++GLPVL   RT
Sbjct:  194 LPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRT 322          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: YQEF_ECOLI (Probable acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=yqeF PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 9.928e-13
Identity = 65/202 (32.18%), Postives = 94/202 (46.53%), Query Frame = -1
Query:   66 KAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLARDNNL--------RADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLR 647
            KA  L    I  G+ ++ IAGG +    AP  + +S             TGA+L     V  S+    L     +   G++     E +A+ + I R  QD   L+S Q+  AA   G F D I P    +    L        R D S E LA L+P++D   G++TAGN++ + DGA+ V++ SEA A    LPVLA +R
Sbjct:   93 KALHLATQAIQCGEADIVIAGGQENMSRAPHVLTDSR------------TGAQLGNSQLV-DSLVHDGLWDAFNDYHIGVT----AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQPRTDASAEGLARLNPSFDSL-GSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR 276          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.928e-13
Identity = 55/139 (39.57%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG------LAR---DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P + R      G+ MG   E +AK   I R +QDE  + SHQR  AA +   F   I    G      L R   D  +R +T+L  LA L PA+D  NGT+TAG S+ L+DGAS +L+ SE+ A   GL   A +R+
Sbjct:  132 FHPGMGRTVAKAAGM-MGLTAEMLAKIHNISRQSQDEFAVRSHQRAYAATQADHFAKEIVATNGHDADGILKRFDFDEVIRPETNLAGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.928e-13
Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLARDNNL---------RADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P L RN     G+ MG   E +A+   I R  QD     SH R  AA + G F + I P  G   D  L         R +T++E LA L PA+D  +GT+TAG S+ L+DGA+ +L+ SE+ A E GL   A +R+
Sbjct:  132 FHPGLSRNVAKAAGM-MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARVRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.928e-13
Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = -1
Query:   63 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLAR---------DNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 404
            MG   E + K   I R  QD   L SHQ    A  +G F D I P +G            D  +R DT+LE LA L PA++ + GT+TAG S+ +TDGAS +++ S   A + G+  +A +R+
Sbjct:  151 MGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQGYDENGFLKVFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRS 273          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.928e-13
Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = -1
Query:   63 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRG---------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 404
            MG   E +AK   I R  QDE    SH+    A ++G F + I P  G         +  D  +R +T+ E L  L PA+D +NGT+TAG S+ LTDGAS ++L S   A   GL  +A +R+
Sbjct:  151 MGLTAEMLAKMHGITREQQDEFGARSHRLAHEATQEGRFKNEIVPIEGHDENGFVKLIEEDETIRPETTAESLGQLRPAFDPKNGTVTAGTSSQLTDGASAMVLMSAERAEALGLTPIAKIRS 273          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADA_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.928e-13
Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = -1
Query:   63 FKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISPYRGLARDNNL---------RADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 452
            F P L RN     G+ MG   E +A+   I R  QD     SH R  AA + G F + I P  G   D  L         R +T++E LA L PA+D  +GT+TAG S+ L+DGA+ +L+ SE+ A E GL   A +R+
Sbjct:  132 FHPGLSRNVAKAAGM-MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARVRS 269          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: THLA_CLOD6 (Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.297e-12
Identity = 45/126 (35.71%), Postives = 77/126 (61.11%), Query Frame = -1
Query:   51 MGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLISP--YRG------LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETA 404
            MG   E +A++W I R  QDEL L S  + + A  +G FD+ I P   +G      + +D  ++  T++EKLA L PA+ +++GT+TAGN++ + DGA+++++ ++  A E G+  LA + +  TA
Sbjct:  157 MGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAF-KKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTA 281          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FADA_PSE145.820e-1338.213-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_ESCF35.820e-1338.853-ketoacyl-CoA thiolase OS=Escherichia fergusonii ... [more]
THIK2_ARATH7.602e-1336.153-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidop... [more]
YQEF_ECOLI9.928e-1332.18Probable acetyl-CoA acetyltransferase OS=Escherich... [more]
FADA_YERE89.928e-1339.573-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADA_SHISS9.928e-1338.853-ketoacyl-CoA thiolase OS=Shigella sonnei (strain... [more]
FADA_PSEU29.928e-1337.403-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_MARAV9.928e-1338.213-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei ... [more]
FADA_ECOK19.928e-1338.853-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 ... [more]
THLA_CLOD61.297e-1235.71Acetyl-CoA acetyltransferase OS=Clostridium diffic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
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