EY674965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 7.501e-39 Identity = 73/92 (79.35%), Postives = 79/92 (85.87%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS + PSYLTGEFPGDYGWDTAGLSADP+TFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG G LG P Sbjct: 58 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149 HSP 2 Score: 76.2554 bits (186), Expect = 3.173e-13 Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNP+LIHAQSILA+WA QVVLMG YR+ GGPL Sbjct: 132 KAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPL 181
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.723e-38 Identity = 72/92 (78.26%), Postives = 78/92 (84.78%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS + PSYLTGEFPGDYGWDTAGLSADP+TFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG G LG P Sbjct: 58 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNP 149 HSP 2 Score: 76.6406 bits (187), Expect = 2.430e-13 Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNP+LIHAQSILAIWA QVVLMG YR+ GGPL Sbjct: 132 KAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPL 181
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.723e-38 Identity = 72/92 (78.26%), Postives = 78/92 (84.78%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS + PSYLTGEFPGDYGWDTAGLSADP+TFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG G LG P Sbjct: 30 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNP 121 HSP 2 Score: 76.2554 bits (186), Expect = 3.173e-13 Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNP+LIHAQSILAIWA QVVLMG YR+ GGPL Sbjct: 104 KAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPL 153
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.335e-38 Identity = 69/84 (82.14%), Postives = 71/84 (84.52%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRG 253 LGP SG PPSYLTGEFPGDYGWDT GLSADP+TFAKNRELEVIHCRWA+ LGCVFPELLARNGVKFGE VWFKAG G Sbjct: 57 LGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEG 140 HSP 2 Score: 25.7942 bits (55), Expect = 9.335e-38 Identity = 13/35 (37.14%), Postives = 17/35 (48.57%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRP 441 G +EG + GR GE +P+Y GLG P Sbjct: 168 GAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDP 202 HSP 3 Score: 70.8626 bits (172), Expect = 1.333e-11 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG L + GNPSL+HAQSILAIWACQVVLMG Y +AGG L Sbjct: 131 KAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRL 180
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.083e-37 Identity = 72/92 (78.26%), Postives = 78/92 (84.78%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS + PSYLTGEFPGDYGWDTAGLSADP+TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG G LG P Sbjct: 56 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 147 HSP 2 Score: 77.0258 bits (188), Expect = 1.860e-13 Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + GA IFSEG LDYLGNP+L+HAQSILAIWA QVVLMG YR+ GGPL Sbjct: 130 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPL 179
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.083e-37 Identity = 72/92 (78.26%), Postives = 78/92 (84.78%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS + PSYLTGEFPGDYGWDTAGLSADP+TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG G LG P Sbjct: 56 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 147 HSP 2 Score: 77.0258 bits (188), Expect = 1.860e-13 Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + GA IFSEG LDYLGNP+L+HAQSILAIWA QVVLMG YR+ GGPL Sbjct: 130 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPL 179
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.083e-37 Identity = 72/92 (78.26%), Postives = 78/92 (84.78%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS + PSYLTGEFPGDYGWDTAGLSADP+TFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAG G LG P Sbjct: 57 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNP 148 HSP 2 Score: 77.411 bits (189), Expect = 1.425e-13 Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + GA IFSEG LDYLGNP+L+HAQSILAIWA QVVLMG YR+ GGPL Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPL 180
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.413e-37 Identity = 72/92 (78.26%), Postives = 76/92 (82.61%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS PSYLTGEFPGDYGWDTA +SADP+TFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAG G G P Sbjct: 59 LGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNP 150 HSP 2 Score: 76.6406 bits (187), Expect = 2.430e-13 Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + GA IFSEG LDY GNP+LIHAQSILAIWACQVVLMG YR+ GG L Sbjct: 133 KAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTL 182
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 7.021e-37 Identity = 72/92 (78.26%), Postives = 76/92 (82.61%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS + PSYLTGEFPGDYGWDTAGLSADP+TFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAG G LG P Sbjct: 58 LGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNP 149 HSP 2 Score: 75.0998 bits (183), Expect = 7.070e-13 Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IF+EG LDYLGNP+LIHAQSILAIWA QVVLMG YR+ GGPL Sbjct: 132 KAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPL 181
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.943e-36 Identity = 70/92 (76.09%), Postives = 76/92 (82.61%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGE PSYL GEF GDYGWDTAGLS+DP+TFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAG G LG P Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNP 152 HSP 2 Score: 84.3445 bits (207), Expect = 1.165e-15 Identity = 40/50 (80.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + GA IFSEG LDYLGNPSL+HAQSILAIWACQVVLMG YR+AGGPL Sbjct: 135 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPL 184 The following BLAST results are available for this feature:
BLAST of EY674965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674965 ID=EY674965; Name=EY674965; organism=Citrus sinensis; type=EST; length=992bpback to top |