EY674965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.781e-32 Identity = 68/92 (73.91%), Postives = 71/92 (77.17%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGE PSYLTGEFPGDYGWDTAGLSA P+TFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAG G LG P Sbjct: 62 LGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNP 153 HSP 2 Score: 22.3274 bits (46), Expect = 1.781e-32 Identity = 8/21 (38.10%), Postives = 12/21 (57.14%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMY 399 G +EG + G GE +P+Y Sbjct: 173 GAVEGYRIARGPLGEVTDPLY 193 HSP 3 Score: 74.3294 bits (181), Expect = 1.206e-12 Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + GA IFSEG LDYLGNPSL+HAQSILAIW +V+LMG YRIA GPL Sbjct: 136 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPL 185
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.700e-32 Identity = 65/93 (69.89%), Postives = 72/93 (77.42%), Query Frame = 2 Query: 2 LGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGP+S P+YLTGEFPGDYGWDTAGLSADP+TF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAG G LG P Sbjct: 45 LGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNP 137 HSP 2 Score: 21.557 bits (44), Expect = 8.700e-32 Identity = 12/35 (34.29%), Postives = 16/35 (45.71%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRP 441 G IEG + G +GE +P+Y GL P Sbjct: 157 GLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDP 191
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.133e-31 Identity = 69/92 (75.00%), Postives = 70/92 (76.09%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFSGE PSYLTGEF G LSADP+TFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG G LG P Sbjct: 57 LGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 140 HSP 2 Score: 23.0978 bits (48), Expect = 1.133e-31 Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRPRSL 450 G +EG + G GE +P+Y GL P +L Sbjct: 160 GAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAL 197 HSP 3 Score: 79.7221 bits (195), Expect = 2.870e-14 Identity = 39/50 (78.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + G+ IFSEG LDYLGNPSLIHAQSILAIWA QV+LMG YRIAGGPL Sbjct: 123 KAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 172
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 4.408e-31 Identity = 65/93 (69.89%), Postives = 71/93 (76.34%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS + PSYL GEFPGDYGWDTAGLSADP+ FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAG G LG P Sbjct: 59 LGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.068e-30 Identity = 65/93 (69.89%), Postives = 70/93 (75.27%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS P+YLTGEFPGDYGWDTAGLSADP+TF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAG G LG P Sbjct: 48 LGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSP 140 HSP 2 Score: 21.557 bits (44), Expect = 2.068e-30 Identity = 12/35 (34.29%), Postives = 16/35 (45.71%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRP 441 G IEG + G +GE +P+Y GL P Sbjct: 160 GLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDP 194
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 6.365e-30 Identity = 64/93 (68.82%), Postives = 69/93 (74.19%), Query Frame = 2 Query: 2 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGGPYLQRGQA*LLGEP 277 LGPFS + PSYL GEFPGDYGWDTAGLSADP+ FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAG G LG P Sbjct: 56 LGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNP 148
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.733e-27 Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 2 Query: 2 LGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGGPYLQRGQA*LLG 271 LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAG G LG Sbjct: 42 LGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLG 133
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.731e-23 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 26 PSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGGPYLQRGQA*LLGEP 277 P TGEFPGDYGWDTAGLSADP+TF + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAG Q G LG P Sbjct: 73 PRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNP 158 HSP 2 Score: 20.7866 bits (42), Expect = 5.731e-23 Identity = 11/35 (31.43%), Postives = 16/35 (45.71%), Query Frame = 1 Query: 337 GPIEGTELLEGRSGEEKEPMYAKRQL*SNGLGRRP 441 G +EG + G +GE +P+Y GL P Sbjct: 178 GLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDP 212
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.391e-15 Identity = 40/72 (55.56%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 20 EPPSYLTGEFPGDYGWDTAGLSADPKTFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAG 232 E P YL GE GDYG+D GL P+ FAK + E+IH RWAMLGA G + PE L + G G EAVWFK G Sbjct: 80 EIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTG 151
BLAST of EY674965 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.553e-15 Identity = 39/50 (78.00%), Postives = 42/50 (84.00%), Query Frame = 3 Query: 225 RRGAHIFSEGRLDYLGNPSLIHAQSILAIWACQVVLMGTH*RYRIAGGPL 374 + GA IFSEG LDYLGNP+LIHAQSILAIWACQVVLMG YR+ GGPL Sbjct: 17 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPL 66 The following BLAST results are available for this feature:
BLAST of EY674965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674965 ID=EY674965; Name=EY674965; organism=Citrus sinensis; type=EST; length=992bpback to top |