EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ANAVT (Uroporphyrinogen decarboxylase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hemE PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 9.455e-63
Identity = 112/205 (54.63%), Postives = 153/205 (74.63%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFR+ SE  ++ +E+SLQPW  F+PDGVILFSDI+TPL G+ I  DI +GKGP+I  PI T A+++Q+R  +PE ++P++   L  LR+EV +++ VLGFVGAP+TLA+Y VEG  SK +S IK LAFS+P +LH LL K   ++A Y +YQ D+GAQ VQ+FDSWA +LSP D++ F+LPY +++   +KQTHPD  LIL  SG
Sbjct:   46 SFRDRSEIPEVAIEVSLQPWKAFQPDGVILFSDIVTPLPGLGIEMDIAEGKGPIIHAPIRTQAQIEQLRPLEPEAALPFIKTILQALRQEVGHQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNLAFSEPAILHQLLTKLADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQIKQTHPDTPLILLVSG 250          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_PROMP (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=hemE PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.106e-62
Identity = 118/205 (57.56%), Postives = 157/205 (76.59%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SEN +L  EIS+QP+  FKPDGVILFSDILTPL GM I F+II+ KGP+I DPI    +V++++E  P ES+ +VG+ L+ L+++V NEA VLGFVGAP+TLA+YVVEG SSK++S IK +AF +P +LH LL  F  S+ +Y++YQ  +GAQ VQIFDSWA +LSP D++ F+ PY K++V+ VK+  PD  +ILY SG
Sbjct:   44 SFRERSENPELSYEISMQPFLAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNIRQVEKLKELIPNESLSFVGEVLSSLKKDVKNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKEEFPDTPIILYISG 248          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_GLOVI (Uroporphyrinogen decarboxylase OS=Gloeobacter violaceus GN=hemE PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.106e-62
Identity = 115/201 (57.21%), Postives = 151/201 (75.12%), Query Frame = 2
Query:   17 FRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILY 619
            F+E  EN DL VEISLQP+  F+PDGVI+FSDILTP  GM IPF++++ +GPVI  PI T  +V+ VR  DPE S+ +V   L  LR EV   A VLGFVGAP+TLA+Y VEG SSK ++ IK++AFS+P +LHALL KF  ++A+YV +Q D+GAQAVQ+FD+WA +L+P D+  F+LPY ++IV  V+Q HP+  LILY
Sbjct:   42 FKERCENPDLAVEISLQPFRAFRPDGVIMFSDILTPFDGMGIPFELVESRGPVIDPPIRTREQVEAVRPLDPEASLAFVRTILQTLRREVGEAATVLGFVGAPWTLAAYAVEGKSSKDYALIKQMAFSEPDLLHALLTKFADAIARYVIFQIDSGAQAVQLFDTWAGQLNPADYRAFALPYERRIVEQVRQVHPETPLILY 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_PROM5 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemE PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.128e-62
Identity = 115/205 (56.10%), Postives = 158/205 (77.07%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SEN +L  +IS+QP+  FKPDGVILFSDILTPL GM I F+II+ KGP+I +PI    +++ ++E  P ES+ +VG+ L+ L+++VNNEA VLGFVGAP+TLA+YVVEG SSK++S IK +AF +P +LH LL  F  S+ +Y++YQ  +GAQ VQIFDSWA +LSP D++ F+ PY K++V+ VK+ +P+  +ILY SG
Sbjct:   44 SFRERSENPELSYQISMQPFKAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIENPIKNIHQIENLKELVPSESLSFVGEVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKEKYPETPIILYISG 248          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_NOSP7 (Uroporphyrinogen decarboxylase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemE PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.329e-61
Identity = 110/205 (53.66%), Postives = 149/205 (72.68%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFR+ SE  D+ +E+SLQPW  F+PDGVILFSDI+TPL G+ I  DI +GKGP+I  P+ T  ++D++   +PE ++P++   L  LR EV +++ VLGFVGAP+TLA+Y VEG  SK +S IK +AFS P +LH LL K   ++A Y +YQ D+GAQ VQ+FDSWA +LSP D++ F+LPY +++   VKQTHPD  LIL  SG
Sbjct:   46 SFRDRSEIPDVAIEVSLQPWKAFQPDGVILFSDIVTPLPGLGIDMDIAEGKGPIIHSPLRTQEQIDRLHPLEPEAALPFIKTILQALRSEVGDKSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILHQLLTKLADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQVKQTHPDTPLILLVSG 250          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SYNJB (Uroporphyrinogen decarboxylase OS=Synechococcus sp. GN=hemE PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.776e-61
Identity = 112/205 (54.63%), Postives = 155/205 (75.61%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F++  E  +L VEISLQP+  F PDGVILFSDILTPL GM IPF++++ +GP+I  PI + A+++++R  +PEES+P++   L+ LR EV  +A +LGFVG+P+TLA Y VEG SSK ++ IK LAF+QP +LH LL K   S+A+YV YQ + GAQ VQ+FD+WA +LSPVD+E ++LPY KQIV+ VK  +P + LILY +G
Sbjct:   40 TFKQRCEIPELAVEISLQPFRAFAPDGVILFSDILTPLEGMGIPFELVEHQGPIIDPPIRSQAQIERIRLLEPEESLPFIKTILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFAQPPLLHQLLSKLADSIARYVIYQIEGGAQVVQLFDTWAGQLSPVDYECWALPYQKQIVDQVKARYPQVPLILYING 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SYNJA (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain JA-3-3Ab) GN=hemE PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.575e-60
Identity = 112/205 (54.63%), Postives = 154/205 (75.12%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F++  E  +L +EISLQP+  F PDGVI+FSDILTPL GM IPF++++ +GP+I  PI + A+V+Q+R  +PEES+P++   L+ LR EV  +A +LGFVG+P+TLA Y VEG SSK ++ IK LAF+QP+VLH LL K   S+A+YV YQ + GAQ VQ+FD+WA +LSP D+E ++LPY KQIV+ VK   P + LILY +G
Sbjct:   56 TFKQRCEIPELAIEISLQPFRAFAPDGVIMFSDILTPLEGMGIPFELVEQQGPIIDPPIRSQAQVEQIRLLEPEESLPFIKTILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFTQPQVLHQLLSKLADSIARYVIYQIECGAQVVQLFDTWAGQLSPGDYETWALPYQKQIVDQVKARCPQVPLILYING 260          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_THEEB (Uroporphyrinogen decarboxylase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemE PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.562e-57
Identity = 106/205 (51.71%), Postives = 145/205 (70.73%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFR+ SE  +L +EISLQP+  F PDGVILFSDILTPL G+ IPFDI++ KGP+I  PI T  +V  +   +PE + P++   L  LR+EV + AAVLGF GAP+TLA+Y +EG SSK + +IK +A+ +P +LH  L    T++A Y+ YQ D GAQ VQ+FDSWA +LS  D++ F+ PY KQ++  VK  +PD+ +ILY +G
Sbjct:   42 SFRQRSEIPELAIEISLQPFRAFAPDGVILFSDILTPLPGIGIPFDIVESKGPIIDPPIRTLEQVQHLHPLEPEAACPFIRPILATLRQEVGDRAAVLGFAGAPWTLAAYAIEGKSSKDYIQIKTMAYREPDLLHKFLNHLATAIADYLCYQIDCGAQVVQLFDSWAGQLSRQDYDTFAFPYQKQVIQQVKAVYPDVPIILYING 246          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP1_ARATH (Uroporphyrinogen decarboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=At3g14930 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 6.563e-56
Identity = 104/205 (50.73%), Postives = 148/205 (72.20%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SEN DL+VEISLQPW  F+PDGVI+FSDILTPL    +PFDI + KGPVI  PI T+ ++ ++   D E+ + +VG +L ILR EV   AAVLGFVGAP+T+A+Y+VEGG+++ ++ IK +  + P VL ALL   T ++ +YV YQ ++GA  +QIFDSW  +L+P  +E +S PY+++I++ VK+  PD  ++ Y +G
Sbjct:   98 SFRERSENTDLIVEISLQPWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHPIDFEK-LQFVGDSLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRALLSHLTKAITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFYING 301          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP1_ORYSJ (Uroporphyrinogen decarboxylase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0622300 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.238e-54
Identity = 105/207 (50.72%), Postives = 148/207 (71.50%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPE--ESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SFRE SE  +L+VEI+LQPW  F PDGVILFSDILTPL  + +PFDI   KGPVI  P+ ++   +QVRE  P   E + +VG++L ILR E++ +AA+LGFVGAP+T+A+YVVEGG +  ++ IK +  + P VL  LL     ++++Y+ YQ ++GAQ +QIFDSW  +L P  +E++S PY+KQIVN +K   P++ L+LY +G
Sbjct:   85 SFRERSETTELIVEITLQPWRAFAPDGVILFSDILTPLPAIGVPFDISDSKGPVIQSPVRSE---EQVRELTPIDFEKLRFVGESLKILRTEIDGQAALLGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPNVLRGLLSHLADAISEYIIYQVNSGAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVNKIKIECPNVPLVLYING 288          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_ANAVT9.455e-6354.63Uroporphyrinogen decarboxylase OS=Anabaena variabi... [more]
DCUP_PROMP2.106e-6257.56Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_GLOVI2.106e-6257.21Uroporphyrinogen decarboxylase OS=Gloeobacter viol... [more]
DCUP_PROM56.128e-6256.10Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_NOSP72.329e-6153.66Uroporphyrinogen decarboxylase OS=Nostoc punctifor... [more]
DCUP_SYNJB6.776e-6154.63Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_SYNJA2.575e-6054.63Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_THEEB1.562e-5751.71Uroporphyrinogen decarboxylase OS=Thermosynechococ... [more]
DCUP1_ARATH6.563e-5650.73Uroporphyrinogen decarboxylase 1, chloroplastic OS... [more]
DCUP1_ORYSJ1.238e-5450.72Uroporphyrinogen decarboxylase 1, chloroplastic OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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