EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_MYCLE (Uroporphyrinogen decarboxylase OS=Mycobacterium leprae GN=hemE PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.055e-29
Identity = 68/183 (37.16%), Postives = 108/183 (59.02%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ 589
            ++  EI+LQP   +  D  ILFSDI+ PL    I  DI+   GPVI DP+ T  ++  ++  +P+   P + +A+++L   +  +  ++GF GAPFTLASY+VEGG S++  + K +  ++P   H L+ K T     ++  Q D G  A+Q+FDSWA  LS  D+ ++ LP+  +I  TV +
Sbjct:   56 EVACEITLQPLRRYDVDAAILFSDIVVPLCAAGIDLDIVPDVGPVIGDPVRTATDIHAMKPLEPQAIQP-IFQAISLLVAALG-DVPLIGFAGAPFTLASYLVEGGPSRNHPRTKAMMLAEPASWHTLMDKLTDLTLGFLLGQIDAGVDAIQVFDSWAGTLSLSDYRQYVLPHSARIFATVAE 236          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_MYCLB (Uroporphyrinogen decarboxylase OS=Mycobacterium leprae (strain Br4923) GN=hemE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.055e-29
Identity = 68/183 (37.16%), Postives = 108/183 (59.02%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ 589
            ++  EI+LQP   +  D  ILFSDI+ PL    I  DI+   GPVI DP+ T  ++  ++  +P+   P + +A+++L   +  +  ++GF GAPFTLASY+VEGG S++  + K +  ++P   H L+ K T     ++  Q D G  A+Q+FDSWA  LS  D+ ++ LP+  +I  TV +
Sbjct:   56 EVACEITLQPLRRYDVDAAILFSDIVVPLCAAGIDLDIVPDVGPVIGDPVRTATDIHAMKPLEPQAIQP-IFQAISLLVAALG-DVPLIGFAGAPFTLASYLVEGGPSRNHPRTKAMMLAEPASWHTLMDKLTDLTLGFLLGQIDAGVDAIQVFDSWAGTLSLSDYRQYVLPHSARIFATVAE 236          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_HYDS0 (Uroporphyrinogen decarboxylase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=hemE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.055e-29
Identity = 72/205 (35.12%), Postives = 115/205 (56.10%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SF +  +NV+    +SLQP  +   D VI+FSDIL  L  M I      G+GPV+    + + +   ++       + YV + L +L+E+  +   V+GF GAPFTLASYV+E  SS+ F+K K   +   K  H L+ K + ++ +Y+ +Q  +GA  +QIFDSW+  LS   ++E+   Y   I+ ++KQ HP+  +I +  G
Sbjct:   42 SFLDFCKNVEDAAIVSLQPVDILGVDAVIMFSDILVLLEPMGIKVSFEAGEGPVL----DHNFDFKNLKSQGISGDLSYVFELLKVLKEK--SPVPVIGFCGAPFTLASYVIEKESSRDFTKTKVFMYENQKDFHILMEKLSEALVEYIDHQIKSGADVIQIFDSWSMSLSRFAYKEYVYDYNAFIIKSIKQKHPNTPIIYFFRG 240          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_BURPS (Uroporphyrinogen decarboxylase OS=Burkholderia pseudomallei GN=hemE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.055e-29
Identity = 73/219 (33.33%), Postives = 120/219 (54.79%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILRE-----EVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYA----SGIWV 637
            + SF   ++  D   E++LQP   F  D  ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R      E      ++GF G+P+TLA Y+VEGG S  F  +K +A+++P ++H +L     ++A Y+  Q + GAQAV IFD+W   L+   ++ FSL Y+++++  +K+ H    +   A     G+W+
Sbjct:   44 AGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGGLWL 262          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_BURP6 (Uroporphyrinogen decarboxylase OS=Burkholderia pseudomallei (strain 668) GN=hemE PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.055e-29
Identity = 73/219 (33.33%), Postives = 120/219 (54.79%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILRE-----EVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYA----SGIWV 637
            + SF   ++  D   E++LQP   F  D  ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R      E      ++GF G+P+TLA Y+VEGG S  F  +K +A+++P ++H +L     ++A Y+  Q + GAQAV IFD+W   L+   ++ FSL Y+++++  +K+ H    +   A     G+W+
Sbjct:   44 AGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGGLWL 262          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_BURP0 (Uroporphyrinogen decarboxylase OS=Burkholderia pseudomallei (strain 1106a) GN=hemE PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.378e-29
Identity = 73/219 (33.33%), Postives = 120/219 (54.79%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILRE-----EVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYA----SGIWV 637
            + SF   ++  D   E++LQP   F  D  ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R      E      ++GF G+P+TLA Y+VEGG S  F  +K +A+++P ++H +L     ++A Y+  Q + GAQAV IFD+W   L+   ++ FSL Y+++++  +K+ H    +   A     G+W+
Sbjct:   44 AGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDINAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGGLWL 262          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_METFK (Uroporphyrinogen decarboxylase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=hemE PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.800e-29
Identity = 69/190 (36.32%), Postives = 111/190 (58.42%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            + SF +  +N DL  E++LQP   F  D  ILFSDILT    M +     +G+GP     +  ++++ ++   D    + YV  A++ +R  ++    ++GF G+P+TLA+Y+VEG     F  IK++A+++P +LH +L     ++  Y+  Q   GAQAV IFDSW   LS   ++EFSL Y++QIV+
Sbjct:   43 AGSFMDLCKNTDLATEVTLQPLDRFPLDAAILFSDILTIPDAMGLGLYFEEGEGPKFERTLREESDIRKLAVPDIGSELRYVTDAVSQIRRALDGRVPLIGFSGSPWTLATYMVEGRGGTDFLTIKQMAYARPDLLHHILSVTAQAVTAYLNAQIAAGAQAVMIFDSWGGALSHYAYQEFSLQYMQQIVS 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_POLSJ (Uroporphyrinogen decarboxylase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=hemE PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.350e-29
Identity = 72/225 (32.00%), Postives = 118/225 (52.44%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSL--ILYASGIWVACLRG*LLKGGEW 676
            + SF   + N D   E++LQP   +  D  ILFSDILT    M +      G+GP    P+  +A V ++ E      + YV  A+T +R+ +N    ++GF G+P+TLA Y+VEG  S  +  +K + + +P ++H +L     ++A Y+  Q + GAQAV IFDSW   L+   F+ FSL Y  +++  +K+ H  + +  +++  G            GG+W
Sbjct:   44 AGSFMGLATNTDYATEVTLQPLERYPLDAAILFSDILTVPDAMGLGLSFALGEGPRFATPVRDEAAVARL-EVPDMGKLRYVFDAVTSIRKALNGRVPLIGFSGSPWTLACYMVEGAGSDDYRLVKTMLYQRPDLMHKMLAVNADAVAAYLNAQIEAGAQAVMIFDSWGGVLADAAFQTFSLAYTARVLGQLKREHDGVKIPRLVFTKG------------GGQW 255          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_HUMAN (Uroporphyrinogen decarboxylase OS=Homo sapiens GN=UROD PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.350e-29
Identity = 68/197 (34.52%), Postives = 114/197 (57.87%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPE---ESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVK 586
            A+  F  +  + +   E++LQP   F  D  I+FSDIL     + +   ++ GKGP   +P+  + +++++R  DPE     + YV +A+T+ R+ +     ++GF GAP+TL +Y+VEGG S   ++ KR  + +P+  H LLR  T ++  Y+  Q   GAQA+Q+F+S A  L P  F +F+LPY++ +   VK
Sbjct:   51 AAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLR--DPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVK 245          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_BORPD (Uroporphyrinogen decarboxylase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=hemE PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.350e-29
Identity = 69/196 (35.20%), Postives = 114/196 (58.16%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTH 595
            + SF   ++N D   E++LQP   +  D  ILFSDILT    M +  D   G+GP    P+ T+ +V ++   D E S+ YV  A+ ++R E++ +  ++GF G+P+T+A Y+VEG  S  +  IK + +++P +LH +L     +  +Y+  Q   GAQAV +FDSW   L+   F++FSL Y +++V  + + H
Sbjct:   45 AGSFMGLAQNPDYAAEVTLQPLARYDLDAAILFSDILTVPHAMGLGLDFAPGEGPRFARPLRTEDDVARLAVPDME-SLRYVFDAVAVIRRELDGKVPLIGFAGSPWTIACYMVEGRGSDDYRLIKTMLYARPDLLHRILEVNAQATLQYLNAQIQAGAQAVMLFDSWGGVLADGLFQQFSLAYTRKVVAGLIREH 239          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_MYCLE1.055e-2937.16Uroporphyrinogen decarboxylase OS=Mycobacterium le... [more]
DCUP_MYCLB1.055e-2937.16Uroporphyrinogen decarboxylase OS=Mycobacterium le... [more]
DCUP_HYDS01.055e-2935.12Uroporphyrinogen decarboxylase OS=Hydrogenobaculum... [more]
DCUP_BURPS1.055e-2933.33Uroporphyrinogen decarboxylase OS=Burkholderia pse... [more]
DCUP_BURP61.055e-2933.33Uroporphyrinogen decarboxylase OS=Burkholderia pse... [more]
DCUP_BURP01.378e-2933.33Uroporphyrinogen decarboxylase OS=Burkholderia pse... [more]
DCUP_METFK1.800e-2936.32Uroporphyrinogen decarboxylase OS=Methylobacillus ... [more]
DCUP_POLSJ2.350e-2932.00Uroporphyrinogen decarboxylase OS=Polaromonas sp. ... [more]
DCUP_HUMAN2.350e-2934.52Uroporphyrinogen decarboxylase OS=Homo sapiens GN=... [more]
DCUP_BORPD2.350e-2935.20Uroporphyrinogen decarboxylase OS=Bordetella petri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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