EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CARHZ (Uroporphyrinogen decarboxylase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=hemE PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.161e-44
Identity = 90/193 (46.63%), Postives = 126/193 (65.28%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQT 592
            SF E  +  +L VE++LQP      D  ILF+DIL PL GM I F   + +GPVI +P+ T  +V +VR   PEE VPYV +A+ ILR E+  +  ++GF GAPFTLASY++EGG SK++ + KRL +  P+  H LL K   S  +Y++ Q   GAQAVQ+FDSW   LSP D+E++ LP+ K + + +K+T
Sbjct:   40 SFLEMCKTPELAVEVTLQPVRKLGVDAAILFADILLPLEGMGIGFRFARDEGPVIENPVRTIVDVKKVRVITPEEDVPYVLEAIKILRRELAGKVPLIGFSGAPFTLASYIIEGGGSKNYIQCKRLMWEAPEAWHELLGKIAESTVRYLKAQIAAGAQAVQVFDSWVGTLSPEDYEKYVLPHSKYVFDNLKET 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_GEOLS (Uroporphyrinogen decarboxylase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=hemE PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.611e-40
Identity = 85/205 (41.46%), Postives = 128/205 (62.44%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SF E  +  +L  E+++QP  +   D  ILFSDILTP+  M +  D + G  PV  +P+ T A+V+++R  DPE  VPYV +A+ ILR+E+  +  ++GF GAPFTLA Y+VEG  SK ++ IKR+ ++ P V  AL+ K T    +Y+  Q   GAQA+QIFD+W   LSP D+E++ LPY  +++N + +    +   +  SG
Sbjct:   40 SFLELCKTPELAAEVTIQPVDILGVDAAILFSDILTPVEPMGLKLDFVPG--PVFENPVRTMADVEKLRIPDPEADVPYVLQAIRILRKELAGKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPDVYAALMEKVTMMDMEYLNAQIRAGAQAIQIFDTWGGVLSPTDYEKYVLPYTTKLINGLNRKETPVIHFVKGSG 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VIBCH (Uroporphyrinogen decarboxylase OS=Vibrio cholerae GN=hemE PE=3 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.469e-39
Identity = 83/190 (43.68%), Postives = 121/190 (63.68%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GPV   PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +S+P VLHALL K   S+  Y+  Q   GAQAV +FD+W   L+P D+++FSL Y+ +IV+
Sbjct:   43 AGDFMALCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VIBC3 (Uroporphyrinogen decarboxylase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=hemE PE=3 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.469e-39
Identity = 83/190 (43.68%), Postives = 121/190 (63.68%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GPV   PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +S+P VLHALL K   S+  Y+  Q   GAQAV +FD+W   L+P D+++FSL Y+ +IV+
Sbjct:   43 AGDFMALCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_PSEA6 (Uroporphyrinogen decarboxylase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=hemE PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.918e-39
Identity = 83/214 (38.79%), Postives = 131/214 (61.21%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHP----DLSLILYASGIWV 637
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +     +G+GP    PI + A++  +   DPE+ + YV  A+  +R+ +  E  ++GF G+P+TLA+Y++EGGSSK F+KIK++AFS P+ LH LL K   S+  Y+  Q D GAQ+V +FD+W   LSP D+++FSL Y+ +IV+ + + +      ++L    +G+W+
Sbjct:   43 AGDFMSLCKNAELACEVTLQPLRRFDLDAAILFSDILTIPDAMGLGLYFEQGEGPKFSKPITSMADIQNLPAPDPEQELQYVMNAVRTIRKNLQGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMAFSDPQALHLLLDKLADSVILYLNAQIDAGAQSVMVFDTWGGVLSPRDYQDFSLQYMHKIVDGLTRENDGRKVPVTLFTKNAGMWL 256          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_MYXXD (Uroporphyrinogen decarboxylase OS=Myxococcus xanthus (strain DK 1622) GN=hemE PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.505e-39
Identity = 82/193 (42.49%), Postives = 122/193 (63.21%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQT 592
            +F +  ++ DL  E+++QP      D  I+FSDIL P+  M I  ++   KGP   DP+ + A++D++   DP E   +V +A+   R+ +N+   V+GF GAPFTLA+Y+VEGG SK +  IKRL F QP++ H L  K T ++  Y++ Q + GA  VQIFDSW   LSP D+E F +PYLK++V+ +K T
Sbjct:   40 AFLDLCKHPDLAAEVTVQPVTRLGVDAAIIFSDILIPVEAMGITLEL-GDKGPHFPDPVRSAADIDKLGVPDPVEGTGFVAEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLMFEQPELAHRLFGKLTDTLIPYLKMQVEAGASIVQIFDSWGGALSPWDYERFCIPYLKRMVSELKAT 231          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_GEOMG (Uroporphyrinogen decarboxylase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=hemE PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.505e-39
Identity = 83/191 (43.46%), Postives = 122/191 (63.87%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  +F E  +  +L  E++LQP  +   D  ILFSDILTP+  M +  D + G  PV   P+ T A+V+++R  +PEE VPYV   + ILR+E+     ++GF GAPFTLA Y+VEG  SK ++ IKR+ ++ P+V  AL+ K T    +Y+  Q   GAQA+QIFD+W   LSP D+E+F LPY ++++N
Sbjct:   37 SKCTFLELCKTPELAAEVTLQPVDILGVDAAILFSDILTPVEPMGLKLDFVPG--PVFETPVRTMADVERLRIPNPEEDVPYVLDTIKILRKELAGRVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVYAALMDKVTMMDMEYLNAQIRAGAQAIQIFDTWGGVLSPTDYEKFVLPYTRKLIN 225          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_COLP3 (Uroporphyrinogen decarboxylase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=hemE PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 7.290e-39
Identity = 83/214 (38.79%), Postives = 129/214 (60.28%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHP----DLSLILYASGIWV 637
            +  F    +N +L  E+++QP   F  D  ILFSDILT    M +      G+GP    PI   A+VD++   DPE+ + YV  A+  +R+E+  E  ++GF G+P+TLA+Y++EGGSSK F+KIK++ F++P+ LH LL K   S+  Y+  Q   GAQ+V +FD+W   LSP D+ EFSL Y+ +IV+ + + +      ++L     G+W+
Sbjct:   43 AGDFMSVCKNAELACEVTIQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIAVPDPEDELGYVMNAVRTIRKELKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMFAEPQTLHLLLDKLADSVISYLNAQIAAGAQSVMVFDTWGGVLSPRDYNEFSLQYMAKIVDGLTRHNEGRQVPVTLFTKNGGMWL 256          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_PSYIN (Uroporphyrinogen decarboxylase OS=Psychromonas ingrahamii (strain 37) GN=hemE PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.624e-38
Identity = 81/196 (41.33%), Postives = 121/196 (61.73%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTH 595
            +  F     N DL  E++LQP   F  D  ILFSDILT    M +     +G+GP +  PI    +VD +   DPE  + YV  A+  +R E+     ++GF G+P+TLA+Y+VEGGSSK F+KIK++AF +P++LH LL K   S+  Y+  Q   GAQ+V +FD+W   LSP D+++FSL Y+ +IV  +++++
Sbjct:   43 AGDFMSLCRNADLACEVTLQPLRRFDLDAAILFSDILTIPDAMGLGLYFAEGEGPKLKRPITCKKDVDNLIMPDPEGELQYVMNAVRTIRRELKGSVPLIGFAGSPWTLATYMVEGGSSKAFTKIKKMAFCEPQLLHTLLDKLADSVIDYLNAQIAAGAQSVMVFDTWGGVLSPRDYKDFSLQYMTKIVAGLQRSY 238          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSL (Uroporphyrinogen decarboxylase OS=Geobacter sulfurreducens GN=hemE PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.624e-38
Identity = 81/191 (42.41%), Postives = 119/191 (62.30%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  +F E  +  +L  E+++QP  +   D  ILFSDILTP+  M +  D + G  PV   P+ T A+V+++R  +PEE VPYV   + ILR E+     ++GF GAPFTLA Y+VEG  SK ++ IKR+ ++ P V  AL+ K T    +Y+  Q   GAQA+QIFD+W   LSP D+E++ LPY  +++N
Sbjct:   37 SKCTFLELCKTPELAAEVTIQPIDILNVDAAILFSDILTPVEPMGLKLDFVPG--PVFEHPVRTMADVEKLRIPNPEEDVPYVLDTIKILRRELAGRVPLIGFGGAPFTLACYMVEGKGSKDWANIKRMMYAAPDVYAALMDKVTMMDMEYLNAQIKAGAQAIQIFDTWGGVLSPTDYEKYVLPYTTKLIN 225          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_CARHZ1.161e-4446.63Uroporphyrinogen decarboxylase OS=Carboxydothermus... [more]
DCUP_GEOLS8.611e-4041.46Uroporphyrinogen decarboxylase OS=Geobacter lovley... [more]
DCUP_VIBCH1.469e-3943.68Uroporphyrinogen decarboxylase OS=Vibrio cholerae ... [more]
DCUP_VIBC31.469e-3943.68Uroporphyrinogen decarboxylase OS=Vibrio cholerae ... [more]
DCUP_PSEA61.918e-3938.79Uroporphyrinogen decarboxylase OS=Pseudoalteromona... [more]
DCUP_MYXXD2.505e-3942.49Uroporphyrinogen decarboxylase OS=Myxococcus xanth... [more]
DCUP_GEOMG2.505e-3943.46Uroporphyrinogen decarboxylase OS=Geobacter metall... [more]
DCUP_COLP37.290e-3938.79Uroporphyrinogen decarboxylase OS=Colwellia psychr... [more]
DCUP_PSYIN1.624e-3841.33Uroporphyrinogen decarboxylase OS=Psychromonas ing... [more]
DCUP_GEOSL1.624e-3842.41Uroporphyrinogen decarboxylase OS=Geobacter sulfur... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
back to top