EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_BURXL (Uroporphyrinogen decarboxylase OS=Burkholderia xenovorans (strain LB400) GN=hemE PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.236e-29
Identity = 67/201 (33.33%), Postives = 116/201 (57.71%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNN-----EAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTH 595
            + SF   ++N     E++LQP   +  D  ILFSDILT    M +  + + G+GP    P+ T+ +V ++   D + ++ YV  A+  +R  + +        ++GF G+P+TLA Y+VEGG S  F  +K + +++P ++H +L     ++A Y+  Q + GAQAV IFD+W   L+   ++ FSL Y++Q+V+ +K+ H
Sbjct:   44 AGSFLGLAKNPAFATEVTLQPLERYPLDAAILFSDILTVPDAMGLGLEFVTGEGPKFARPVRTEDDVARLAVPDIDATLRYVTDAVREIRTALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLMHRILDVNARAVAAYLNAQIEAGAQAVMIFDTWGGALADGVYQRFSLHYIQQVVSQLKRDH 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_NITMU (Uroporphyrinogen decarboxylase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.932e-29
Identity = 66/189 (34.92%), Postives = 108/189 (57.14%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIV 574
            + +F    +N D   E+++QP   F  D  ILFSDILT    M +     +G+GP    P+  + E+  +   DP   + YV  A++ +R+ ++N   ++GF G+PFTLA Y+VEG     F +IK + + +P +LH +L     ++  Y+  Q ++GAQAV IFD+W   LS   +++FSL Y+ Q++
Sbjct:   43 AGNFLALCKNPDFATEVTMQPLARFPLDAAILFSDILTIPDAMGLGLYFAEGEGPRFERPLREEWEIRALTVPDPAVHLRYVMDAVSQIRKTLDNRVPLIGFSGSPFTLACYMVEGAGGTDFRQIKTMLYRRPDLLHHILDINAQAVTAYLNAQIESGAQAVMIFDTWGGALSHAAYQQFSLRYMTQVL 231          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_MYCVP (Uroporphyrinogen decarboxylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.932e-29
Identity = 70/189 (37.04%), Postives = 104/189 (55.03%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQI 571
            A  +  ++  + DL+ EI+LQP      D  ILFSDI+ PL    I  DI+   GPVI  P+ T  +V  +R  +P    P V  A+  L  E+  +  ++GF GAPFTLASY+VEGG S++  + K +   +    HAL+   T     +++ Q D G  A+Q+FDSWA  LS  D+  + LP+  ++
Sbjct:   44 AKNTMMQACFDADLITEITLQPVRRHGVDAAILFSDIVVPLRAAGIDLDIVPDVGPVIAQPVRTADDVAAIRPLEPSRVDP-VATAIGRLVGELG-DVPLIGFAGAPFTLASYLVEGGPSRNHERTKAMMLGETATWHALMTALTDITIAFLRAQVDAGVDAIQVFDSWAGTLSLADYRTYVLPHSARV 230          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_BURPP (Uroporphyrinogen decarboxylase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.932e-29
Identity = 67/201 (33.33%), Postives = 116/201 (57.71%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNN-----EAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTH 595
            + SF   +++     E++LQP   +  D  ILFSDILT    M +  + + G+GP    P+ T+ +V ++   D + ++ YV  A+  +R  + +        ++GF G+P+TLA Y+VEGG S  F  +K + +++P ++H +L     S+A Y+  Q + GAQAV IFD+W   L+   ++ FSL Y++Q+V+ +K+ H
Sbjct:   44 AGSFLGLAKSPAYATEVTLQPLDRYPLDAAILFSDILTVPDAMGLGLEFVTGEGPKFVRPVRTEDDVARLAVPDIDATLRYVTDAVREIRTALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLMHRILDVNARSVAAYLNAQIEAGAQAVMIFDTWGGALADGVYQRFSLQYIQQVVSQLKRDH 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VARPS (Uroporphyrinogen decarboxylase OS=Variovorax paradoxus (strain S110) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.167e-28
Identity = 73/219 (33.33%), Postives = 118/219 (53.88%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPD---LSLILY--ASGIWVACLR 649
            + SF   + N D   E++LQP   +  D  ILFSDILT    M +      G+GP    P+  +A V  + E      + YV  A+  +R+ ++    ++GF G+P+TLA Y+VEG  S  +  +K + +S+P ++H LL     S+A Y+  Q D GAQAV +FDSW   L+   F+EFSL Y  +++  +++   D   +  I++    G+W+  +R
Sbjct:   45 AGSFMGLATNTDYATEVTLQPLERYPLDAAILFSDILTVPDAMGLGLSFEAGEGPRFARPVQGEAAVAAL-EVPDMAKLRYVFDAVASIRKALDGRVPLIGFSGSPWTLACYMVEGAGSSDYRLVKSMLYSRPDLMHRLLAVNADSVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTARVLAGLQRNGADGQPVPRIVFTKGGGLWLEAMR 262          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_FRATM (Uroporphyrinogen decarboxylase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.167e-28
Identity = 66/193 (34.20%), Postives = 109/193 (56.48%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREF-DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ 589
            +F +   N D   E++L P   +  D  I+FSDILT    M +    IKG GPV  +PI +  ++D+++   D   S+ YV  A+      +N    ++GF G+P+TLA+Y++EG  SK F+K++++ ++ P+++H+LL++       Y+  Q   GA +V IFD+W   L    ++ FSL Y + I   VKQ
Sbjct:   41 NFMDMCRNADACCEVALHPLQRYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYVYNAVKTTSSAIN--VPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQRLADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYKEYIAKNVKQ 231          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ACIBL (Uroporphyrinogen decarboxylase OS=Acidobacteria bacterium (strain Ellin345) GN=hemE PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.167e-28
Identity = 65/193 (33.68%), Postives = 107/193 (55.44%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQT 592
            S  E  +  D+  E+++        D  I+F+D+L PL  M +PF    G+GPVI  PI   A + ++R  D    + YV +A+  + +   ++  V+GF GAPFTLASY++EGG S+++ ++K+L ++ P     LL K    +++Y   Q   GA  +QIFDSW   LS  D+  + LP   ++V  ++ +
Sbjct:   43 SLVEICKKPDVAAEVTITAAEALNVDAAIIFADLLLPLEVMGLPFHFSPGEGPVIEVPIRDAAHITRLRT-DRAHDLGYVAEAVKKVSDHFGSKLPVIGFCGAPFTLASYMIEGGGSRNYLEVKKLMYNSPHAWDELLGKLVAVLSEYTADQVKAGADVIQIFDSWVGCLSVEDYRRYVLPRTTELVKALQHS 234          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_PONAB (Uroporphyrinogen decarboxylase OS=Pongo abelii GN=UROD PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.524e-28
Identity = 68/197 (34.52%), Postives = 112/197 (56.85%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPE---ESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVK 586
            A+  F  +  + +   E +LQP   F  D  I+FSDIL     + +   ++ GKGP   +P+  + +++ +R  DPE     + YV +A+T+ R+ +     ++GF GAP+TL +Y+VEGG S   ++ KR  + +P+  H LLR  T ++  Y+  Q   GAQA+Q+F+S A  L P  F +F+LPY++ +   VK
Sbjct:   51 AAQDFFSTCRSPEACCEPTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLECLR--DPEVVASELDYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVAKQVK 245          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_COXB2 (Uroporphyrinogen decarboxylase OS=Coxiella burnetii (strain CbuG_Q212) GN=hemE PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.990e-28
Identity = 68/190 (35.79%), Postives = 106/190 (55.79%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTV 583
            +F    +  +L  E +LQP   F  D  I+FSDILT    M +   I    GPVI +P+ +  +V++++    EE++ Y+  A+ +  + +++   ++GF G+P+TLA Y+ EG SSK F   + + + QP V H LL+K TT    Y+  Q   GA  V +FD+W   L+P  + +FSL YL QI   V
Sbjct:   45 NFMAFCKTPELACEATLQPLRRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPPVEEALSYLFDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTLLQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEV 234          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_COXBU (Uroporphyrinogen decarboxylase OS=Coxiella burnetii GN=hemE PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.599e-28
Identity = 68/190 (35.79%), Postives = 106/190 (55.79%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTV 583
            +F    +  +L  E +LQP   F  D  I+FSDILT    M +   I    GPVI +P+ +  +V++++    EE++ Y+  A+ +  + +++   ++GF G+P+TLA Y+ EG SSK F   + + + QP V H LL+K TT    Y+  Q   GA  V +FD+W   L+P  + +FSL YL QI   V
Sbjct:   45 NFMAFCKTPELACEATLQPLRRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYLFDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTLLQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEV 234          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_BURXL5.236e-2933.33Uroporphyrinogen decarboxylase OS=Burkholderia xen... [more]
DCUP_NITMU8.932e-2934.92Uroporphyrinogen decarboxylase OS=Nitrosospira mul... [more]
DCUP_MYCVP8.932e-2937.04Uroporphyrinogen decarboxylase OS=Mycobacterium va... [more]
DCUP_BURPP8.932e-2933.33Uroporphyrinogen decarboxylase OS=Burkholderia phy... [more]
DCUP_VARPS1.167e-2833.33Uroporphyrinogen decarboxylase OS=Variovorax parad... [more]
DCUP_FRATM1.167e-2834.20Uroporphyrinogen decarboxylase OS=Francisella tula... [more]
DCUP_ACIBL1.167e-2833.68Uroporphyrinogen decarboxylase OS=Acidobacteria ba... [more]
DCUP_PONAB1.524e-2834.52Uroporphyrinogen decarboxylase OS=Pongo abelii GN=... [more]
DCUP_COXB21.990e-2835.79Uroporphyrinogen decarboxylase OS=Coxiella burneti... [more]
DCUP_COXBU2.599e-2835.79Uroporphyrinogen decarboxylase OS=Coxiella burneti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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