EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VEREI (Uroporphyrinogen decarboxylase OS=Verminephrobacter eiseniae (strain EF01-2) GN=hemE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.873e-27
Identity = 69/198 (34.85%), Postives = 109/198 (55.05%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPD 601
            + SF   + +VD   E++LQP   F  D  ILFSDILT    M +     +G+GP +   +  +A V  +   D    + YV  A+  +R  +N    ++GF G+P+TLA Y+VEG  S  +  +K L +S+P ++H +L     ++A Y+  Q D GAQAV +FDSW   L+   F+ FSL Y  +++  +++T  D
Sbjct:   45 AGSFMGLATSVDYATEVTLQPLERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRLAKVVRDEATVAALAVPDMAR-LRYVFDAVASIRRALNGRVPLIGFSGSPWTLACYMVEGRGSDDYRLVKGLMYSRPDLMHRILAINADTVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQAFSLAYTARVLAQLQRTGVD 241          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_MOUSE (Uroporphyrinogen decarboxylase OS=Mus musculus GN=Urod PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.901e-27
Identity = 65/195 (33.33%), Postives = 111/195 (56.92%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEES-VPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVK 586
            A+  F  +  + +   E++LQP   F  D  I+FSDIL     + +   ++ GKGP   +P+  + +++++R+     S + YV +A+T+ R+ +     ++GF GAP+TL +Y+VEGGSS   ++ KR  + +P+  H LL   T  +  Y+  Q   GAQA+Q+F+S A  L    F +F+LPY++ +   VK
Sbjct:   51 AAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAAASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHKLLGILTDVLVPYLIGQVAAGAQALQLFESHAGHLGTELFSKFALPYIRDVAKRVK 245          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RALEJ (Uroporphyrinogen decarboxylase OS=Ralstonia eutropha (strain JMP134) GN=hemE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.360e-27
Identity = 69/218 (31.65%), Postives = 122/218 (55.96%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILR----EEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTH--PDLSLILY--ASGIWV 637
            + SF   ++N     E++LQP   +  D  ILFSDILT    M +     +G+GP    P+ T+A+V ++   D   S+ YV  A+  +R    ++      ++GF G+P+TLA Y+VEGG S  F  +K + + +P ++H +L     ++++Y+  Q + GAQAV IFD+W   L+   ++ FSL Y+++++  +K+ H    +  I++    G+W+
Sbjct:   43 AGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFARPLRTEADVQKLAVPDMA-SLQYVFDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMHRILDINAQAVSEYLNAQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRKVLAGLKREHDGQQIPAIVFTKGGGLWL 259          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_WOLPP (Uroporphyrinogen decarboxylase OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=hemE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.862e-26
Identity = 69/202 (34.16%), Postives = 118/202 (58.42%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLI 613
            +++F E   ++DLVVE++LQP   F  D  I+FSDIL     +    + ++G GP+I  P+ +  E+   +EF+ + + P +  A+  +R +++ E +++GF G P+T+ASY++EGGSSK FSK+      +   L  +++K T +   Y+  Q + GA  +Q+FDS A  L    FE + +   K+IV+ +K   PD  +I
Sbjct:   43 TSNFMEICYSIDLVVELTLQPIKRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPII-KPVKSSEELKNSQEFETK-TFPILN-AIRKVRSQLSEEKSLIGFAGGPWTVASYIIEGGSSKTFSKVLHFCSLE---LEEVIKKITEATIIYLIKQIEFGADVIQLFDSNAGILQGELFERYVIKPTKEIVSAIKNKFPDFPII 238          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RALPJ (Uroporphyrinogen decarboxylase OS=Ralstonia pickettii (strain 12J) GN=hemE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.862e-26
Identity = 68/221 (30.77%), Postives = 118/221 (53.39%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILR----EEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVACL 646
            + SF   +++     E++LQP   +  D  ILFSDILT    M +     +G+GP    P+ T+A+V  +   D   S+ YV  A+  +R    ++      ++GF G+P+TLA Y+VEGG S  F  +K + +++P ++H +L     ++  Y+  Q D GAQAVQ+FD+W   L+   +++FSL Y+ ++V  ++         + L     G+W+  +
Sbjct:   44 AGSFLGLAKSPAYATEVTLQPLDRYALDAAILFSDILTVPDAMGLGLSFAQGEGPRFAKPVRTEADVAALSVPDMS-SLQYVFDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILEINAQAVIDYLNAQIDAGAQAVQVFDTWGGALADGIYQQFSLAYMARVVEGIRAGADGQRVPVILFTKGGGLWLEAM 263          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_GLUOX (Uroporphyrinogen decarboxylase OS=Gluconobacter oxydans GN=hemE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.862e-26
Identity = 67/201 (33.33%), Postives = 114/201 (56.72%), Query Frame = 2
Query:   11 ASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLI 613
            A F       D+  E+++QP   +  DG ILFSDIL     M    + I G+GPV+   I ++A++ ++     +++V  V + L+ L +E+ +   +LGF G+PFT++ Y+VEGG S+ F++ +R+  + P +   L+   T+S A+ +  Q + GA+AV +FDSWA  L P  F  + +   +QIV  ++  HP   +I
Sbjct:   49 ADFLTRCMTPDMATELTIQPIRRYGMDGAILFSDILILPWAMGQSLEFIDGRGPVL-GAIRSEADLARLDPKRVQDAVAPVRETLSRLTKELPDVTTLLGFAGSPFTVSCYMVEGGGSRDFAETRRMMQTNPALFDRLIDTLTSSTAEMLCGQIEAGAEAVMLFDSWAGILPPSAFRRYVIEPTRQIVEYIRARHPKTPII 248          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RAT (Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus GN=Urod PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.432e-26
Identity = 65/197 (32.99%), Postives = 112/197 (56.85%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPE---ESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVK 586
            A+  F  +  + +   E++L+P   F  D  I+FSDIL     + +   ++ GKGP   +P+  + +++++R  DP      + YV +A+T+ R+++     ++GF GAP+TL +Y+VEGGS K  ++ KR  + +P   H LL   T ++  Y+  Q   GAQA+Q+F+S A  L    F +F+LPY++ +   VK
Sbjct:   48 AAQDFFSTCRSPEACCELTLEPVRRFPLDAAIIFSDILVVPQALAMEVTMVPGKGPSFPEPLREERDLERLR--DPAAVASELGYVFQAITLTRQQLAGRVPLIGFAGAPWTLMTYMVEGGSFKTMAQAKRWLYQKPVASHKLLGILTHALVPYLIGQVAAGAQALQLFESHAGHLGSELFSKFALPYIRDVAKRVK 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_WOLTR (Uroporphyrinogen decarboxylase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=hemE PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.077e-26
Identity = 73/202 (36.14%), Postives = 114/202 (56.44%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLI 613
            ++SF E   N DLVVE++LQP   F  D  I+FSDIL     +    D I+G GP I  P+    E+   ++ +  +++P +  A+  +R+++  E +++GF G P+T+ASY++EG SSK FSK+  L    P  L  ++ + T     Y+  Q + GA  +Q+FDS A  LS   FEE  +   K+IV+ +K   PD  +I
Sbjct:   52 TSSFMEICYNTDLVVELTLQPVARFSMDAAIIFSDILIVADVLGCDVDFIRGVGPTI-KPVKNFKELRNPQKIE-TKTLPIL-NAIRKVRDKLPEEKSLIGFAGGPWTVASYIIEGRSSKTFSKVLNL---HPSSLEQIIEQITEVTISYLVKQIEFGADVIQLFDSNAGVLSGELFEECVIKPTKKIVSAIKGKFPDFPII 247          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_WIGBR (Uroporphyrinogen decarboxylase OS=Wigglesworthia glossinidia brevipalpis GN=hemE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.207e-25
Identity = 62/181 (34.25%), Postives = 106/181 (58.56%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTV 583
            DL  + +L P   F  D  I+FSDIL     M +  +  +  GP   +PI++ +++  +   DPE+++ YV  ++ I+ +E++ +  ++GF G+P+TLA Y++EG  +K FSKIK++ +   K LH LL+K T S+  Y+  Q   G  A+ IFD+W   L+   + E+SL Y+  I+  +
Sbjct:   54 DLSSKAALIPIKKFSLDAAIIFSDILILPYAMGMDVNFYENLGPSFLNPISSISDMKNLNVPDPEKNLKYVLDSIKIICKELDKKIPLIGFSGSPWTLACYMIEGKCNKIFSKIKKMIYQNSKELHFLLKKITNSIILYLNSQIIYGVNAIIIFDTWGGILTEEKYCEYSLHYMSLIIKNL 234          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_METPP (Uroporphyrinogen decarboxylase OS=Methylibium petroleiphilum (strain PM1) GN=hemE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.207e-25
Identity = 67/199 (33.67%), Postives = 110/199 (55.28%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAA-----VLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ 589
            + SF   + N     E++LQP   +  D  ILFSDILT    M +     +G+GP    P+  +A+V +++  D E+ + YV  A+  +R  +    A     ++GF G+P+TLA Y+VEG  S  +  +K L + +P ++H +L     ++A Y+  Q + GAQAV IFDSW   L+   F+ FSL Y ++++  +K+
Sbjct:   51 AGSFMGLATNPQYATEVTLQPLDRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAHPLRDEADVAKLQVPDMEK-LRYVFDAVASIRRALAPAGAPGRVPLIGFSGSPWTLACYMVEGAGSDDYRLVKTLLYRRPDLMHRILEVNADAVAAYLNAQIEAGAQAVMIFDSWGGVLADGAFQRFSLAYTERVLRQLKK 248          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_VEREI2.873e-2734.85Uroporphyrinogen decarboxylase OS=Verminephrobacte... [more]
DCUP_MOUSE4.901e-2733.33Uroporphyrinogen decarboxylase OS=Mus musculus GN=... [more]
DCUP_RALEJ8.360e-2731.65Uroporphyrinogen decarboxylase OS=Ralstonia eutrop... [more]
DCUP_WOLPP1.862e-2634.16Uroporphyrinogen decarboxylase OS=Wolbachia pipien... [more]
DCUP_RALPJ1.862e-2630.77Uroporphyrinogen decarboxylase OS=Ralstonia picket... [more]
DCUP_GLUOX1.862e-2633.33Uroporphyrinogen decarboxylase OS=Gluconobacter ox... [more]
DCUP_RAT2.432e-2632.99Uroporphyrinogen decarboxylase (Fragment) OS=Rattu... [more]
DCUP_WOLTR7.077e-2636.14Uroporphyrinogen decarboxylase OS=Wolbachia sp. su... [more]
DCUP_WIGBR1.207e-2534.25Uroporphyrinogen decarboxylase OS=Wigglesworthia g... [more]
DCUP_METPP1.207e-2533.67Uroporphyrinogen decarboxylase OS=Methylibium petr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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