EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_BRUA1 (Uroporphyrinogen decarboxylase OS=Brucella abortus (strain S19) GN=hemE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.131e-22
Identity = 67/207 (32.37%), Postives = 109/207 (52.66%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            + SF +   + DL VE++LQP   F  D  ILFSDIL     +       +GKGP++  PI+ D E+  +      + +  V + + ++RE++ +E  +LGF GAP+T+A+Y++ G  +   +  +  A+  P+    LL       A+Y+  Q   GA AVQIFDSW+  L    FE F +  + +IV  V+  +P   +I +  G
Sbjct:   39 AGSFLDLCYSPDLAVEVTLQPIRRFGFDAAILFSDILVVPHALGRDLRFEEGKGPLM-TPIDAD-EIFWLETEGVAKRLEPVYETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGFPKG 243          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHOP5 (Uroporphyrinogen decarboxylase OS=Rhodopseudomonas palustris (strain BisA53) GN=hemE PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.783e-22
Identity = 64/209 (30.62%), Postives = 113/209 (54.07%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +  F +   N +   E++LQP   F  D  I+FSDIL  P + G ++ F++  G+GP + DP+++  +V  + +      +  V  AL I R E+  E  ++GF G+PFT+A+Y+V G  +   +  + +A+  P     ++     S  +Y+  Q + GA+ +QIFD+WA  L P +FE +S+   ++IV  V++  P   +I +  G
Sbjct:   44 AGGFLDLCFNAEFAAEVTLQPIRRFGFDAAIIFSDILVVPYALGRSVRFEV--GEGPRL-DPLDSPDKVSTLTKAIDLSKLQAVFDALRITRRELPPETTLIGFCGSPFTVATYMVAGHGTPDQAPARNMAYQHPGAFAKIIDVLVESSIQYLLAQLEAGAEVLQIFDTWAGVLPPREFERWSIEPTRRIVEGVRKVKPGTKIIGFPRG 249          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_JANSC (Uroporphyrinogen decarboxylase OS=Jannaschia sp. (strain CCS1) GN=hemE PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.783e-22
Identity = 57/195 (29.23%), Postives = 101/195 (51.79%), Query Frame = 2
Query:   35 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILY 619
            N +L  E++LQP   F  D  ILF+DIL     +      + G+GP +    +           D  E++  + + + IL +E+  E  ++GF GAP+T+A+Y++ G  +   +   +L    P+    L+   T +  +Y+  Q   GA+ V++FDSWA  L    F++++L   K+I++ +K  HPDL +I +
Sbjct:   50 NPELAAEVTLQPIRRFDFDASILFADILLIPQALGANLWFVTGEGPRLSTITDASGMARMKTADDIHETLNPIYETVKILAQELPKETTLIGFAGAPWTVATYMIAGRGTPDQAPAHKLREGDPETFDKLMDLITAATIEYLDMQVQAGAEVVKLFDSWAGSLKGEAFDKYALAPAKRIISELKSRHPDLPIIAF 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ERYLH (Uroporphyrinogen decarboxylase OS=Erythrobacter litoralis (strain HTCC2594) GN=hemE PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.783e-22
Identity = 63/192 (32.81%), Postives = 104/192 (54.17%), Query Frame = 2
Query:   53 EISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            E++LQP   F  DG ILFSDIL     +    + + G+GP +  P   DAE++ +      E +  + + +  +R  ++ E  +LGF G+P+T+A+Y+V G  S+     + +A++ P  L A++        +Y+  Q D GA+AVQ+FDSWA  L+P  FE + +     IV  +K+  PD  +I +  G
Sbjct:   54 EVTLQPIRRFGFDGAILFSDILIVPHALGQKLEFLAGEGPHL-SPRLADAELEALSTVP--ERLDAIYETVRQVRAALDPETTLLGFAGSPWTVATYMVAGEGSRDQQAARSMAYTDPGKLQAIVDAIIDLTVEYLVGQIDAGAEAVQLFDSWAGSLAPDQFERWVIAPNAAIVRRLKEARPDALVIGFPKG 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHIL3 (Uroporphyrinogen decarboxylase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.635e-22
Identity = 70/210 (33.33%), Postives = 105/210 (50.00%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTI---LREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            + SF +     +  VE++LQP   +  D  ILFSDIL     M       +G GP + DPI+       +   + EE V Y+   L     LREE+  E  +LGF GAP+T+A+Y++ G  +   +  +  A+   +    LL       A Y+  Q D GA AVQIFDSWA  L   +FE F++  + +++ +VK   P   +I +A G
Sbjct:   42 AGSFLDLCYTPEHAVEVTLQPIRRYGFDAAILFSDILVIPDAMKRNVRFTEGHGPEM-DPIDEAG----IGSLNGEEVVDYLRPVLETVRRLREELPAETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYKHARAFEHLLMLLADVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEAFAIRPVARMIASVKSRRPHARIIAFAKG 246          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHILO (Uroporphyrinogen decarboxylase OS=Rhizobium loti GN=hemE PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.747e-22
Identity = 65/207 (31.40%), Postives = 110/207 (53.14%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            + SF +   + DL VE++LQP   F  D  ILFSDIL     +       +G+GP++  PI+  AE+  +       ++  V + +  LR ++ +E  ++GF GAP+T+A+Y++ G  +   +  +  A+ +P     LL+      A Y+  Q + GA  VQIFDSW+  L    F++F +  + +IV  V+  HPD+ +I +  G
Sbjct:   41 AGSFLDLCYDPDLAVEVTLQPIERFGFDASILFSDILVVPHALGRDVRFEEGRGPLL-TPISV-AEIMALESDVFHVNLEPVYETVRRLRAKLPDETTLIGFCGAPWTVATYMIAGHGTPDQAPARLFAYREPAAFQHLLKVLADHSAAYLIRQIEAGADVVQIFDSWSGVLDDASFDQFCVWPVAEIVRQVQAVHPDVPIIGFPKG 245          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SILPO (Uroporphyrinogen decarboxylase OS=Silicibacter pomeroyi GN=hemE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.058e-21
Identity = 59/194 (30.41%), Postives = 103/194 (53.09%), Query Frame = 2
Query:   35 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLI 613
            N +L  E++LQP   +  D  ILF+DIL     +        G+GP +   I   A+ D+++  D   E++  + + + IL  E+ +E A++GF GAP+T+A+Y++ G  +        L    P +  AL+ + T +  +Y+  Q + GA+ V+IFDSWA  L    F +++L   ++I   +K  HP + +I
Sbjct:   50 NPELAAEVTLQPIRRYGFDAAILFADILLVPQALGADLWFETGEGPRL-STIGAQADFDRLKPVDAIHETLSPIYETVRILTRELPSETALIGFAGAPWTVATYMIAGRGTPDQGPAHALREGNPALFDALIARLTAATIEYLSAQIEAGAEVVKIFDSWAGSLKGEAFTKYALEPCREITQALKARHPGIPVI 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHOPS (Uroporphyrinogen decarboxylase OS=Rhodopseudomonas palustris (strain BisB5) GN=hemE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.058e-21
Identity = 67/209 (32.06%), Postives = 111/209 (53.11%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            + SF +   N  L  E++LQP   F  D  I+FSDIL  P + G  + F++  G+GP + DP+N+   V  +        +  V +AL I+R E+  E  ++GF GAPFT+A+Y+V G  +      + +A+  P     ++     S  +Y+  Q + GA  +QIFD+W   L P +FE++ +   ++IV  V++  PD  +I +  G
Sbjct:   44 AGSFLDLCFNPKLAAEVTLQPIRRFGFDAAIIFSDILVVPYALGRAVRFEV--GEGPRL-DPLNSPDLVGTLNGAIDLGKLEPVFEALRIVRSELAPETTLIGFCGAPFTVATYMVAGQGTSDQHPARLMAYQHPGAFAKIIDVLVESSIQYLLKQLEAGADVLQIFDTWGGILPPREFEKWCIEPTRRIVEGVRKVKPDAKIIGFPRG 249          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SPHAL (Uroporphyrinogen decarboxylase OS=Sphingopyxis alaskensis GN=hemE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.381e-21
Identity = 67/208 (32.21%), Postives = 100/208 (48.08%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +   F E   + +   E++LQP   F  DG ILFSDIL     +        G+GP +  P+   A      E  P+   P V   +  +   +  E   LGF G+P+T+A+Y+V G  SK  +  +R+AF+ P    A++         Y+  Q + G  AVQ+FDSWA  LSP  FE++ +     IV  +K  HPD  +I +  G
Sbjct:   41 SKGGFLELCYDPEAAAEVTLQPIRRFGFDGAILFSDILVIPHALGQHLWFEAGEGPRLAPPLVDGALASL--EAAPQRLDP-VYATVARVAASLPPETTFLGFAGSPWTVATYMVAGRGSKDQAAARRMAFADPAAFGAIIDAIADLTVTYLSGQIEQGVDAVQLFDSWAGSLSPAQFEQWVIAPNAGIVRRLKALHPDTPVIGFPKG 245          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SPHWW (Uroporphyrinogen decarboxylase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.804e-21
Identity = 67/206 (32.52%), Postives = 103/206 (50.00%), Query Frame = 2
Query:   17 FRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPI--NTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            F E + + D   EI+LQP   F  DG ILFSDIL     M        G+GP +   +   T A+++ V    P    P  G    + R  +  E   LGF G+P+T+A+Y+V G  S+  ++ +R A+  P    A++     + A Y+  Q + G  AVQ+FDSWA  L+P +FE + +    Q+V  +   HP + +I +  G
Sbjct:   48 FLELAYDSDAAAEITLQPIRRFGFDGAILFSDILIIPHAMGQDLRFEAGEGPRLSPTLVDRTLADLEPV----PARLEPIYGTVRRV-RAALPAETTFLGFAGSPWTVATYMVAGQGSREQAETRRKAYRDPAGFQAIIDALVDATADYLSKQIEAGVDAVQLFDSWAGSLAPREFERWVIAPTAQLVRRLHARHPGVPVIGFPKG 248          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_BRUA12.131e-2232.37Uroporphyrinogen decarboxylase OS=Brucella abortus... [more]
DCUP_RHOP52.783e-2230.62Uroporphyrinogen decarboxylase OS=Rhodopseudomonas... [more]
DCUP_JANSC2.783e-2229.23Uroporphyrinogen decarboxylase OS=Jannaschia sp. (... [more]
DCUP_ERYLH2.783e-2232.81Uroporphyrinogen decarboxylase OS=Erythrobacter li... [more]
DCUP_RHIL33.635e-2233.33Uroporphyrinogen decarboxylase OS=Rhizobium legumi... [more]
DCUP_RHILO4.747e-2231.40Uroporphyrinogen decarboxylase OS=Rhizobium loti G... [more]
DCUP_SILPO1.058e-2130.41Uroporphyrinogen decarboxylase OS=Silicibacter pom... [more]
DCUP_RHOPS1.058e-2132.06Uroporphyrinogen decarboxylase OS=Rhodopseudomonas... [more]
DCUP_SPHAL1.381e-2132.21Uroporphyrinogen decarboxylase OS=Sphingopyxis ala... [more]
DCUP_SPHWW1.804e-2132.52Uroporphyrinogen decarboxylase OS=Sphingomonas wit... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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