EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHOP2 (Uroporphyrinogen decarboxylase OS=Rhodopseudomonas palustris (strain HaA2) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.356e-21
Identity = 66/209 (31.58%), Postives = 110/209 (52.63%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            + SF +   N  L  E++LQP   F  D  I+FSDIL  P + G  + F++  G+GP + DP+N+   V  +        +  V +AL I+R E+  E  ++GF GAPFT+A+Y+V G  +      + +A+  P     ++     S  +Y+  Q + GA  +QIFD+W   L P +FE++ +   ++IV  V++  P   +I +  G
Sbjct:   44 AGSFLDLCFNAKLAAEVTLQPIRRFGFDAAIIFSDILVVPYALGRAVRFEV--GEGPRL-DPLNSPDLVGTLNGAIDLSKLEPVFEALRIVRSELAPETTLIGFCGAPFTVATYMVAGQGTSDQHPARLMAYQHPGAFARIIDVLVESSIQYLLKQLEAGADVLQIFDTWGGILPPREFEKWCIEPTRRIVEGVRKVSPGAKIIGFPRG 249          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SILST (Uroporphyrinogen decarboxylase OS=Silicibacter sp. (strain TM1040) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.077e-21
Identity = 60/194 (30.93%), Postives = 103/194 (53.09%), Query Frame = 2
Query:   35 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREF-DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLI 613
            N +L  E++LQP   +  D  ILF+DIL     +      + G+GP +   I TDA+  ++    D  E++  + + + IL +E+ +E  ++GF GAP+T+A+Y++ G  +        L      +  ALL + T +   Y+  Q + GA+ V+IFDSWA  L    F++++L   +QI   +K  HP + +I
Sbjct:   50 NPELAAEVTLQPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRL-STITTDADFAKLGPASDVHETLSPIYETVRILSKELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALMQENTPLFEALLARITEATISYLSAQIEAGAEVVKIFDSWAGSLKGEAFDKYALEPARQITAALKARHPHVPVI 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_NOVAD (Uroporphyrinogen decarboxylase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.077e-21
Identity = 58/198 (29.29%), Postives = 105/198 (53.03%), Query Frame = 2
Query:   35 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            + D   E+++QP   F  DG ILFSDIL     M      + G+GP +  P   DA ++ +       S  Y  + +  ++ +++ E  +LGF G+P+T+A+Y+V G  S+     + LA+  P    A++   T    +Y+  Q + GA+ +Q+FDSW+  L+P +FE + +    +I + ++Q +P + +I +  G
Sbjct:   48 DTDAAAEVTVQPIRRFGFDGAILFSDILIVPYAMGQDLQFLAGEGPHL-SPRLLDAALNSLVAVPGRLSPIY--ETVAKVKAQLSPETTLLGFAGSPWTVATYMVAGEGSRDHHDTRALAYRDPSAFQAIIDAITEVTIEYLSGQVEAGAEGLQLFDSWSGSLAPAEFERWVIAPNARIASAMQQRYPHVPVIGFPKG 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_NITHX (Uroporphyrinogen decarboxylase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.019e-21
Identity = 65/199 (32.66%), Postives = 113/199 (56.78%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINT-DAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +   E++LQP   F  D  I+FSDIL  P + G ++ F++  G+GP + DP++T D      RE D  +  P V +AL  +R E++++ A++GF GAP+T+A+Y+V G  +   +  + +A+  P+    ++     +  +Y+  Q   GA  +QIFD+WA  L P +F  +S+   ++IV  V++  PD  +I +  G
Sbjct:   55 EFAAEVTLQPIRRFAFDAAIIFSDILVIPYALGRSVRFEV--GEGPRL-DPLDTPDMAATLSREADMTKLEP-VFEALRRVRRELDSKTALIGFCGAPWTVATYMVAGRGTPDQAPARMMAYRHPEAFAKIIDVLVENSVRYLLGQLKAGADVLQIFDTWAGVLPPREFARWSIEPTRRIVEGVRKIVPDAKIIGFPRG 249          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHOS5 (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=hemE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.953e-21
Identity = 61/196 (31.12%), Postives = 101/196 (51.53%), Query Frame = 2
Query:   35 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILY 619
            N +L  E++LQP   +  D  ILF+DIL     +        G+GP +   I   A V+ ++  D   E +  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +L  +      AL+ + T +  +Y+  Q + G + V++FDSWA  L   DFE+F++   K+I+  +K  HP L +I +
Sbjct:   48 NPELAAEVTLQPIRRYGFDAAILFADILLLPQALGADLWFETGEGPRM-STITDMAGVEALKGKDEIHEKLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRITEATIEYLSKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKKIIAELKARHPGLPIIAF 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_MARMM (Uroporphyrinogen decarboxylase OS=Maricaulis maris (strain MCS10) GN=hemE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.953e-21
Identity = 62/198 (31.31%), Postives = 106/198 (53.54%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVI--FDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            DL  E++LQP   F  D  ILF+DIL     +      + G+GP +  FDP     + +++R    E  +  +G+ L  +  E+ +   ++GF G+P+T+A+Y+VEGG SK   + +  A+  P+    +L +     A+Y+  QA +GA+ +++FDSWA  L    FE   +   K+IV+ V+    D+ +I +  G
Sbjct:   54 DLAAEVTLQPIRRFGFDAAILFADILLVPIALGRKVWFVTGEGPQLEPFDP----RQFEELRLDQTEAVLGSIGETLKRVVPELPDTTTMIGFAGSPWTVATYMVEGGGSKDRFRTRVAAWEYPEAFDGMLDRIADVTAEYLIMQARSGAEVLKLFDSWAEGLPEPLFERVVIRPTKRIVDAVRAAGIDVPIIGFPRG 247          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_BRAJA (Uroporphyrinogen decarboxylase OS=Bradyrhizobium japonicum GN=hemE PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.402e-20
Identity = 64/209 (30.62%), Postives = 113/209 (54.07%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +  F +   N +L  E++LQP   F  D  I+FSDIL  P + G ++ F++  G+GP + +P++  A+V  +        +  V  AL I+R  ++ + A++GF GAP+T+A+Y+V G  +   +  + +A+  P     ++     +  +Y+  Q   GA A+QIFD+WA  L P +F  +S+   ++IV  V+   PD  +I +  G
Sbjct:   43 AGGFLDLCFNPELAAEVTLQPIRRFGFDAAIIFSDILVIPYALGRSVRFEV--GEGPRL-EPLDDPAKVATLAPRADFGKLAPVFDALKIVRGALDPKTALIGFCGAPWTVATYMVAGHGTPDQAPARMMAYRHPDAFAKIIDVLVDNSIEYLLAQLAAGANALQIFDTWAGVLPPAEFARWSVEPTRRIVEGVRAKVPDAKIIGFPRG 248          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ARTS2 (Uroporphyrinogen decarboxylase OS=Arthrobacter sp. (strain FB24) GN=hemE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.443e-20
Identity = 62/196 (31.63%), Postives = 103/196 (52.55%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +L  EI+LQP      D  I FSDI+ PL    +  DI+ G GPV+  P+ T  +V  + +   E   P + +A+ +   ++  +  ++GF GAPFTLA+Y+VEG  S+     + +  + P+  +AL      +   +++ Q + GA A Q+FDSWA  L   D++ F  P   + ++ V+  H    LI + +G
Sbjct:   54 ELASEITLQPVRRHDVDAAIFFSDIVIPLKLAGVGVDIVPGVGPVLDKPVRTAEDVAALPQLTWEALEP-IREAVRLTVAQLG-KTPLIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWNALANWAADASGMFLRAQLEAGASAGQLFDSWAGSLGLADYKRFVAPASARALDHVR--HLGAPLIHFGTG 245          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHOS1 (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=hemE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.803e-20
Identity = 58/193 (30.05%), Postives = 97/193 (50.26%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILY 619
            DL  E++LQP   +  D  ILF+DIL     +        G+GP +    + +         D  E++  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +L  +      AL+ + T +  +Y+  Q + G + V++FDSWA  L   DFE+F++   K+IV+ +K   P L +I +
Sbjct:   50 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMEGVTALKGRDDIHETLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVTEATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFPGLPVIAF 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHOSK (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=hemE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.293e-19
Identity = 61/194 (31.44%), Postives = 100/194 (51.55%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILY 619
            DL  E++LQP   +  D  ILF+DIL     +        G+GP +   I   A V  ++  D   E++  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +L  +      AL+ + T +  +Y+  Q + G + V++FDSWA  L   DFE+F++   K+IV+ +K   P L +I +
Sbjct:   50 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGADLWFETGEGPRM-STITDMAGVTALKGRDDIHETLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVTEATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFPGLPVIAF 242          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_RHOP22.356e-2131.58Uroporphyrinogen decarboxylase OS=Rhodopseudomonas... [more]
DCUP_SILST3.077e-2130.93Uroporphyrinogen decarboxylase OS=Silicibacter sp.... [more]
DCUP_NOVAD3.077e-2129.29Uroporphyrinogen decarboxylase OS=Novosphingobium ... [more]
DCUP_NITHX4.019e-2132.66Uroporphyrinogen decarboxylase OS=Nitrobacter hamb... [more]
DCUP_RHOS58.953e-2131.12Uroporphyrinogen decarboxylase OS=Rhodobacter spha... [more]
DCUP_MARMM8.953e-2131.31Uroporphyrinogen decarboxylase OS=Maricaulis maris... [more]
DCUP_BRAJA3.402e-2030.62Uroporphyrinogen decarboxylase OS=Bradyrhizobium j... [more]
DCUP_ARTS24.443e-2031.63Uroporphyrinogen decarboxylase OS=Arthrobacter sp.... [more]
DCUP_RHOS15.803e-2030.05Uroporphyrinogen decarboxylase OS=Rhodobacter spha... [more]
DCUP_RHOSK1.293e-1931.44Uroporphyrinogen decarboxylase OS=Rhodobacter spha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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