EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICTY (Uroporphyrinogen decarboxylase OS=Rickettsia typhi GN=hemE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.880e-19
Identity = 60/206 (29.13%), Postives = 107/206 (51.94%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVD-QVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F +   +V+   E++LQP   +  D  I+FSDIL   S +    D  +  GPV+       ++ D Q  + D    +  V K +  ++E++ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A Y+  QA +GA  ++IFDSW+  L+  DF EF +   K+I+  VK+   ++ +I +  G
Sbjct:   38 NFLDFCFDVNKATEVTLQPIRRYGLDAAIIFSDILVLPSALGWEVDFKENIGPVLKQ---FKSQKDFQYLQRDSNNKLENVFKIIKKVKEKLPSNTSLIGFAGSPWTVMSYMLEGKGKRDFITSKKFVYENKILAKDLLNFITEKTADYLINQAKSGADILKIFDSWSGVLAEDDFTEFVIEPTKKIILKVKEVFINIPIITFPKG 240          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_PARDP (Uroporphyrinogen decarboxylase OS=Paracoccus denitrificans (strain Pd 1222) GN=hemE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.912e-19
Identity = 56/197 (28.43%), Postives = 99/197 (50.25%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP----EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILY 619
            DL  E++LQP   +  D  ILF+DIL     + +    + G+GP     ++T      V    P     +++  V + + IL  E+  E  ++GF GAP+T+A+Y+V G  +   +              AL+ + T +   Y+  Q + GA+ V++FDSWA  L   DF++F++   ++I+  +K  HP + +I +
Sbjct:   51 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGLDLWFVTGEGP----RLSTVTSAAGVAALKPAAAIHDTLSPVYETVRILARELPRETTLIGFAGAPWTVATYMVAGRGTPDQAPAHAFKAEDRAAFAALIDRITEATIDYLSAQIEAGAEVVKLFDSWAGSLKGRDFDDFAVEPARRIIAALKARHPGIPVIAF 243          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHOS4 (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=hemE PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.094e-18
Identity = 60/194 (30.93%), Postives = 99/194 (51.03%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILY 619
            DL  E++LQP   +  D  ILF+DIL     +        G+GP +   I   A V  ++  D   E++  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +L  +      AL+ + T +  +Y+  Q + G + V++FDSWA  L   DFE+F++   K+IV+ +K     L +I +
Sbjct:   50 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGADLWFETGEGPRM-STITDMAGVTALKGRDDIHETLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVTEATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFQGLPVIAF 242          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICFE (Uroporphyrinogen decarboxylase OS=Rickettsia felis GN=hemE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.429e-18
Identity = 55/205 (26.83%), Postives = 104/205 (50.73%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F +   +V+   E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  ++EE+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L   +F EF +   K+I+  VK+  P + +I +  G
Sbjct:   39 NFLDFCYDVNKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQSNPNNKLEKVYEIIKKVKEELPSTTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAKELLNFITEKTADHLVNQAKSGADVLKLFDSWSGVLGEEEFTEFVIEPTKKIILKVKEDFPKIPIIAFPKG 241          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_PHEZH (Uroporphyrinogen decarboxylase OS=Phenylobacterium zucineum (strain HLK1) GN=hemE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.429e-18
Identity = 67/198 (33.84%), Postives = 107/198 (54.04%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            ++  E +LQP   F  DG I+F+DIL  PL+ G ++ F+   G+GP + +    +A  DQV       S   VG+ L  +R E+  + A++GF GAP+T+A+Y++E   S+     +  A++ P  L ALL     + A+Y+  QA  GAQA+++F+SWA  LS   FE   +     IV  V+     + +I +  G
Sbjct:   53 EMAAEATLQPMRRFPMDGAIVFADILLIPLALGQDVWFEA--GEGPKLGELPPIEALRDQVEASTGRLSA--VGETLARVRAELEPDRALIGFAGAPWTVATYMLERKGSER-EAARAYAYAHPDELDALLDVLVDATARYLVMQAKAGAQALKLFESWAESLSEDVFERIVVRPHAAIVEKVRAAGVTVPIIGFPRG 245          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICBR (Uroporphyrinogen decarboxylase OS=Rickettsia bellii (strain RML369-C) GN=hemE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.184e-18
Identity = 59/206 (28.64%), Postives = 102/206 (49.51%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFD-PINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F E   +VD   E++LQP   F  D  I+FSDIL     +    D  +  GP++       D +  Q    D  E V  + K +   R+E+    +++GF G+P+T+ +Y++EG   + F   K+  +    +   LL   T     ++  Q  +GA  ++IFDSWA  L   +F++F +   K+I+ ++K   PD+ +I +  G
Sbjct:   39 NFLEFCYDVDKATEVTLQPIKRFGFDAAIIFSDILVLPHALGWEVDFKENIGPLLKQFKSKEDFKYLQDNSNDKLEKVYEIVKKV---RKELPKSTSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQIKSGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIKGYFPDIPIITFPKG 241          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICB8 (Uroporphyrinogen decarboxylase OS=Rickettsia bellii (strain OSU 85-389) GN=hemE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.184e-18
Identity = 59/206 (28.64%), Postives = 102/206 (49.51%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFD-PINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F E   +VD   E++LQP   F  D  I+FSDIL     +    D  +  GP++       D +  Q    D  E V  + K +   R+E+    +++GF G+P+T+ +Y++EG   + F   K+  +    +   LL   T     ++  Q  +GA  ++IFDSWA  L   +F++F +   K+I+ ++K   PD+ +I +  G
Sbjct:   39 NFLEFCYDVDKATEVTLQPIKRFGFDAAIIFSDILVLPHALGWEVDFKENIGPLLKQFKSKEDFKYLQDNSNDKLEKVYEIVKKV---RKELPKSTSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQIKSGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIKGYFPDIPIITFPKG 241          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CHLCV (Uroporphyrinogen decarboxylase OS=Chlamydophila caviae GN=hemE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.184e-18
Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ 589
            S + +    N + + E +L    + K D  ILF+DIL+ L G NI +D   G   + F P       + +   DP+E+  Y+ +A+  L + +  +  ++ F  +PFT+ASY+++GG+SK F K     +  P    ALL+K T     Y++ Q   GA A+Q+F+S +  L    F  +      Q+++ +KQ
Sbjct:   36 SQTLKAFFHNTEAITEATLLGPSLLKVDAAILFADILSLLDGFNISYDFSPGP-QISFSPYE-----ELIFTKDPQETFSYLLQAIKNLVKAL--DVPLIAFAASPFTMASYLLDGGASKDFPKTMAFLYQYPDKFDALLKKLTEGTVIYLKEQIHAGAAAIQLFESSSLRLPSELFSRYVTAPNTQLISQLKQ 221          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CAUCR (Uroporphyrinogen decarboxylase OS=Caulobacter crescentus GN=hemE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.184e-18
Identity = 56/174 (32.18%), Postives = 99/174 (56.90%), Query Frame = 2
Query:   53 EISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEF-SLPYLKQI 571
            E++LQP   F  D  I+F+DIL     +        G+GP + D  + ++  ++  E    +++  VG+ LT +R  ++ + A++GF GAP+T+A+Y++E GSS   S  +  A+  P+ L AL++    +   Y+  Q D GAQA+++F+SWA  LS   F+   + P+++ I
Sbjct:   63 EVTLQPMRRFPFDASIVFADILLIPGALGQKVWFEAGEGPKLGDMPSVESMAEKAGEAG--KALSLVGETLTRVRSALDPDKALIGFAGAPWTVATYMIEKGSSDR-SGARTFAYQNPETLDALIQVLVDATIDYLAMQVDAGAQALKLFESWAEGLSEPLFDRLVTQPHIRII 233          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CAUCN (Uroporphyrinogen decarboxylase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=hemE PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 3.184e-18
Identity = 56/174 (32.18%), Postives = 99/174 (56.90%), Query Frame = 2
Query:   53 EISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEF-SLPYLKQI 571
            E++LQP   F  D  I+F+DIL     +        G+GP + D  + ++  ++  E    +++  VG+ LT +R  ++ + A++GF GAP+T+A+Y++E GSS   S  +  A+  P+ L AL++    +   Y+  Q D GAQA+++F+SWA  LS   F+   + P+++ I
Sbjct:   63 EVTLQPMRRFPFDASIVFADILLIPGALGQKVWFEAGEGPKLGDMPSVESMAEKAGEAG--KALSLVGETLTRVRSALDPDKALIGFAGAPWTVATYMIEKGSSDR-SGARTFAYQNPETLDALIQVLVDATIDYLAMQVDAGAQALKLFESWAEGLSEPLFDRLVTQPHIRII 233          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_RICTY2.880e-1929.13Uroporphyrinogen decarboxylase OS=Rickettsia typhi... [more]
DCUP_PARDP4.912e-1928.43Uroporphyrinogen decarboxylase OS=Paracoccus denit... [more]
DCUP_RHOS41.094e-1830.93Uroporphyrinogen decarboxylase OS=Rhodobacter spha... [more]
DCUP_RICFE1.429e-1826.83Uroporphyrinogen decarboxylase OS=Rickettsia felis... [more]
DCUP_PHEZH1.429e-1833.84Uroporphyrinogen decarboxylase OS=Phenylobacterium... [more]
DCUP_RICBR3.184e-1828.64Uroporphyrinogen decarboxylase OS=Rickettsia belli... [more]
DCUP_RICB83.184e-1828.64Uroporphyrinogen decarboxylase OS=Rickettsia belli... [more]
DCUP_CHLCV3.184e-1829.90Uroporphyrinogen decarboxylase OS=Chlamydophila ca... [more]
DCUP_CAUCR3.184e-1832.18Uroporphyrinogen decarboxylase OS=Caulobacter cres... [more]
DCUP_CAUCN3.184e-1832.18Uroporphyrinogen decarboxylase OS=Caulobacter cres... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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