EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ACICJ (Uroporphyrinogen decarboxylase OS=Acidiphilium cryptum (strain JF-5) GN=hemE PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.159e-18
Identity = 57/190 (30.00%), Postives = 99/190 (52.11%), Query Frame = 2
Query:   44 LVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLI 613
            L  E++LQP   F  D  ILFSDIL     +       +G+GP + + I+  A ++ +      +    V + ++ +R E+  E  ++GF G+PFT+A Y+++G     F   + +A++ P +L A++   TT+   Y+ +Q + GA  V +FDSWA  L P  F    +    +IV  ++  HP + +I
Sbjct:   56 LATEVTLQPVRRFGMDAAILFSDILILPWALGQKLRFAEGEGPRL-ERIDGLAGLEALDPAALRQGTEPVMETVSRVRAELPPETTLIGFAGSPFTVACYMIDGRGGD-FPLTREVAYADPALLAAVIETVTTATIDYLSWQIEAGADCVMLFDSWAGLLPPDLFRAHVIHPTARIVEQLRVRHPGVKVI 243          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RHOCA (Uroporphyrinogen decarboxylase OS=Rhodobacter capsulatus GN=hemE PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.431e-18
Identity = 54/193 (27.98%), Postives = 94/193 (48.70%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILY 619
            DL  E++LQP   +  D  ILF+DIL     + +      G+GP +    + +       + D  + +  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +   +      AL+   T +  +Y+  Q + G + V++FDSWA  L   DFE+F++   + I   +K+  P L +I +
Sbjct:   51 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGLDLWFETGEGPRMSTVTSMEGVKGLKGKDDIHDKLAPVYETCKILSRELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKFKDTDRAAFSALIDAVTVATIEYLSKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVEPARVITAEMKRRFPGLPVIAF 243          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICPU (Uroporphyrinogen decarboxylase OS=Rickettsia peacockii (strain Rustic) GN=hemE PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.094e-18
Identity = 55/205 (26.83%), Postives = 103/205 (50.24%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F +   +V    E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L+  +F EF +   K+IV  VK+  P   +I +  G
Sbjct:   39 NFLDFCYDVSKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNYKLEKVYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLNFITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVKEVFPKTPIIAFPKG 241          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICM5 (Uroporphyrinogen decarboxylase OS=Rickettsia massiliae (strain Mtu5) GN=hemE PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 7.094e-18
Identity = 54/205 (26.34%), Postives = 103/205 (50.24%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F +   +V+   E++LQP   +  D  I+FSDIL          D  +  GP++        E  +  + +P + +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +G   +++FDSW+  L+  +F EF +   K+IV  VK+  P   +I +  G
Sbjct:   39 NFLDFCYDVNKATEVTLQPIKRYGFDAAIIFSDILVLPHAFGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNDKLEKVYEIIKKVKKELPSPTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLNFITEKTADHLINQAKSGVDVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVKEVFPKTPIIAFPKG 241          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICCN (Uroporphyrinogen decarboxylase OS=Rickettsia conorii GN=hemE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.264e-18
Identity = 54/205 (26.34%), Postives = 103/205 (50.24%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F +   +V    E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L+  +F EF +   K+I+  VK+  P   +I +  G
Sbjct:   39 NFLDFCYDVSKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNYKLEKVYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLNFITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTEFVIEPTKKIILKVKEVFPKTPIIAFPKG 241          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_NEOSM (Uroporphyrinogen decarboxylase OS=Neorickettsia sennetsu (strain Miyayama) GN=hemE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.264e-18
Identity = 63/213 (29.58%), Postives = 109/213 (51.17%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGIWVACLR 649
            +F +  E+ ++  EI+LQP   F  D  I+FSDIL     +    DI K  GPVI + IN    +     +D  EE +      + I R+ +    +++GF G P+T+A Y++EGG  K F + K     +      ++   T +  +Y+  Q  +GA  +QIF+S+A   S  +F+EF +   ++IV+++     D+ +I +  G  V+ L+
Sbjct:   31 TFFQMCESPEIASEITLQPIKRFDLDAAIVFSDILVLPRALGCNIDIKKSTGPVI-ERINNPNWLT----YDAFEEKISPTLNTIAITRKSLPQNKSLIGFAGGPWTVALYIIEGGWDKTFLRTKEFINKRYHEFKEIISILTDATIQYLNKQLKHGADFIQIFESFAWAASSNEFKEFIVEPTRRIVSSI-----DVPVIGFPKGAGVSYLQ 233          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CHLAB (Uroporphyrinogen decarboxylase OS=Chlamydophila abortus GN=hemE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.210e-17
Identity = 55/195 (28.21%), Postives = 100/195 (51.28%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQT 592
            S + ++   N + + E +L    + K D  ILF+DIL+ L G NI +D   G   + F P     + + +   DP+++  Y+ KA+  L + ++    ++ F  +PFT+A Y++EGG+SK F K     +  P+   ALL++   +   Y++ Q   GA A+Q+F+S +  L    F  +      Q++  +K +
Sbjct:   36 SQTLKDFFHNTEAITEATLLGPSLLKVDAAILFADILSLLDGFNISYDFAPGP-QISFSP-----KEELIFTNDPQDTFSYLLKAIKNLVKRLS--VPLIAFAASPFTMACYLLEGGASKDFPKTMAFLYQHPERFDALLKQLAEATVIYLKEQIQAGASAIQLFESSSLRLPSALFSRYVTRPNTQLITQLKNS 222          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICAE (Uroporphyrinogen decarboxylase OS=Rickettsia africae (strain ESF-5) GN=hemE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.580e-17
Identity = 54/205 (26.34%), Postives = 103/205 (50.24%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F +   +V    E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L+  +F EF +   K+I+  VK+  P   +I +  G
Sbjct:   39 NFLDFCYDVSKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNYKLEKVYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENRILAEELLNFITEKTADHLINQAKSGADILKLFDSWSGVLAEEEFTEFVIEPTKKIILKVKEVFPKTPIIAFPKG 241          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICRS (Uroporphyrinogen decarboxylase OS=Rickettsia rickettsii (strain Sheila Smith) GN=hemE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.696e-17
Identity = 53/205 (25.85%), Postives = 103/205 (50.24%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F +   +V    E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L+  +F +F +   K+I+  VK+  P   +I +  G
Sbjct:   39 NFLDFCYDVSKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNYKLEKVYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLNFITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTKFVIEPTKKIILKVKEVFPKTPIIAFPKG 241          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_RICRO (Uroporphyrinogen decarboxylase OS=Rickettsia rickettsii (strain Iowa) GN=hemE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.696e-17
Identity = 53/205 (25.85%), Postives = 103/205 (50.24%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            +F +   +V    E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L+  +F +F +   K+I+  VK+  P   +I +  G
Sbjct:   39 NFLDFCYDVSKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNYKLEKVYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLNFITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTKFVIEPTKKIILKVKEVFPKTPIIAFPKG 241          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_ACICJ4.159e-1830.00Uroporphyrinogen decarboxylase OS=Acidiphilium cry... [more]
DCUP_RHOCA5.431e-1827.98Uroporphyrinogen decarboxylase OS=Rhodobacter caps... [more]
DCUP_RICPU7.094e-1826.83Uroporphyrinogen decarboxylase OS=Rickettsia peaco... [more]
DCUP_RICM57.094e-1826.34Uroporphyrinogen decarboxylase OS=Rickettsia massi... [more]
DCUP_RICCN9.264e-1826.34Uroporphyrinogen decarboxylase OS=Rickettsia conor... [more]
DCUP_NEOSM9.264e-1829.58Uroporphyrinogen decarboxylase OS=Neorickettsia se... [more]
DCUP_CHLAB1.210e-1728.21Uroporphyrinogen decarboxylase OS=Chlamydophila ab... [more]
DCUP_RICAE1.580e-1726.34Uroporphyrinogen decarboxylase OS=Rickettsia afric... [more]
DCUP_RICRS2.696e-1725.85Uroporphyrinogen decarboxylase OS=Rickettsia ricke... [more]
DCUP_RICRO2.696e-1725.85Uroporphyrinogen decarboxylase OS=Rickettsia ricke... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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