EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ACTP7 (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=hemE PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.121e-38
Identity = 84/217 (38.71%), Postives = 127/217 (58.53%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHP----DLSLILYASGIWVACL 646
            +  F     N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    PI   A+VD +   DPE  + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ ++ PK+LHALL K   S+  Y+  Q   GAQAV +FD+W   L+  +++EFSL Y+ +IV+ + + +      ++L     G+W+  +
Sbjct:   43 AGDFMALCRNADLACEVTLQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAI 259          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ACTP2 (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=hemE PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.121e-38
Identity = 84/217 (38.71%), Postives = 127/217 (58.53%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHP----DLSLILYASGIWVACL 646
            +  F     N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    PI   A+VD +   DPE  + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ ++ PK+LHALL K   S+  Y+  Q   GAQAV +FD+W   L+  +++EFSL Y+ +IV+ + + +      ++L     G+W+  +
Sbjct:   43 AGDFMALCRNADLACEVTLQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAI 259          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSF (Uroporphyrinogen decarboxylase OS=Geobacter sp. (strain FRC-32) GN=hemE PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.770e-38
Identity = 82/191 (42.93%), Postives = 121/191 (63.35%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  +F E  +  +L  E+++QP  +   D  ILFSDILTP+  M +  D + G  PV   PI T A+V+++R    E+ VPYV + + ILR E+ N+  ++GF GAPFTLA Y+VEG  SK ++ IKR+ ++ P+V  AL+ K T    +Y+  Q   GAQA+QIFD+W   LSP D+E+F LPY  +++N
Sbjct:   37 SKCTFLELCKTPELAAEVTIQPVDILGVDAAILFSDILTPVEPMGMALDFVPG--PVFEHPIRTMADVEKLRIPQMEQDVPYVLETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVYAALMEKVTMMDMEYLNAQIKAGAQAIQIFDTWGGVLSPSDYEKFVLPYTTKLIN 225          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CHLP8 (Uroporphyrinogen decarboxylase OS=Chlorobaculum parvum (strain NCIB 8327) GN=hemE PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.770e-38
Identity = 76/194 (39.18%), Postives = 127/194 (65.46%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYA 622
            +L  E+++QP  +   D  I+FSDIL     M +   II+ KG  +   I + A++D++ + D EE + YV  A+ + ++E+N+   ++GF GA +TL +Y VEGG SK+++  K++ + +P++ H LL+K TT ++ Y+  Q + GA A+QIFDSWA+ LS  D+ EF+LPY+KQ V  VK  +P++ +I++A
Sbjct:   51 ELACEVTIQPVDLMGVDAAIIFSDILVVNEAMGMDVQIIESKGIKLTPEIRSQADIDKLIDPDVEEKLGYVFDAIRLTKKELNDRVPLIGFSGAAWTLFTYAVEGGGSKNYANAKKMMYREPQMAHQLLQKITTCISNYLIKQVEAGADAIQIFDSWASALSEDDYREFALPYIKQNVAAVKAAYPEVPVIVFA 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_PSEHT (Uroporphyrinogen decarboxylase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=hemE PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.725e-38
Identity = 79/190 (41.58%), Postives = 119/190 (62.63%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F     N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    PI++ ++V ++ + DP + + YV  A++ +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F KIK++AF++P+ LH LL K   S+  Y+  Q   GAQ++ +FDSW   LSP D+ EFSL Y+ +IV+
Sbjct:   43 AGDFMSLCRNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLSDVKKIPKLDPNDDLGYVMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEPQTLHLLLDKLADSVIDYLNAQIKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_DESPS (Uroporphyrinogen decarboxylase OS=Desulfotalea psychrophila GN=hemE PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 6.171e-38
Identity = 84/204 (41.18%), Postives = 131/204 (64.22%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYAS 625
            SF E  +N  L VE++LQP  +   D  ILFSDIL  +  M    +  +G GPV  +PI     +D +   D +++  +V + + +LR E+  +  ++GF GAPFT A+Y++EGGSSK F + K++ F+QP++ H ++ K T +   Y+Q QA  GAQA+QIFDSWA  L+P DFE F+LPY+++I+ +++Q   DL +I +A+
Sbjct:   40 SFLELCKNPALCVEVTLQPVDLLGMDAAILFSDILILMEAMGAKLEFNEGCGPVFPNPIKDQTALDALIIPDADDATGFVMETIRLLRGEL--QVPLIGFAGAPFTCATYLIEGGSSKVFWETKKMMFTQPELFHGIMEKITQATILYLQAQARAGAQALQIFDSWAGVLAPCDFEVFALPYVRRIIASLQQF--DLPIIYFAN 239          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_THET8 (Uroporphyrinogen decarboxylase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=hemE PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.060e-38
Identity = 73/188 (38.83%), Postives = 121/188 (64.36%), Query Frame = 2
Query:   23 ESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVK 586
            E  +N ++  E++L P      D  ILF+DI TPL GM +   +++ KGPVI +P+  +  V+ +R   PEE+VP+V + + IL+ E+     ++GF GAPFTLASY+VEGG S+ F ++K L + +  + H L+ K T +MA+Y++ QA+ GA  +Q+FDSW   LSP D+  +  P+++++  +++
Sbjct:   46 EIVQNPEVCAEVTLLPVKALGVDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRPLVPEEAVPFVLETIRILKREL--PVPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWHRLMEKLTEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLR 231          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_THET2 (Uroporphyrinogen decarboxylase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=hemE PE=3 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 8.060e-38
Identity = 73/188 (38.83%), Postives = 121/188 (64.36%), Query Frame = 2
Query:   23 ESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVK 586
            E  +N ++  E++L P      D  ILF+DI TPL GM +   +++ KGPVI +P+  +  V+ +R   PEE+VP+V + + IL+ E+     ++GF GAPFTLASY+VEGG S+ F ++K L + +  + H L+ K T +MA+Y++ QA+ GA  +Q+FDSW   LSP D+  +  P+++++  +++
Sbjct:   46 EIVQNPEVCAEVTLLPVKALGVDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRPLVPEEAVPFVLETIRILKREL--PVPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWHRLMEKLTEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLR 231          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_NITSB (Uroporphyrinogen decarboxylase OS=Nitratiruptor sp. (strain SB155-2) GN=hemE PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.060e-38
Identity = 84/210 (40.00%), Postives = 133/210 (63.33%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGI 631
            +  F    +N  +  E++LQP  +   D  ILFSDIL  PL  GM++ F+  KG+GPV   P+ T  ++  + EF PEE + YV + + I+R+++  + A++GF GAP+TLA+Y+VEG  SK ++ IK+L ++ P+ +HAL+ K T ++  Y+  Q ++G  AVQIFDSWA+ L    F EFS  Y+  I   +K+ +P++ +IL+  GI
Sbjct:   37 AGDFLTLCKNPKMAAEVTLQPVEILDVDAAILFSDILVIPLEMGMDLRFE--KGEGPVFSKPVRTWEDLGSLYEF-PEEKLTYVYETIKIVRKKLPKDKALIGFSGAPWTLATYMVEGSGSKTYAAIKKLIYTDPEFMHALMIKITEAVKAYLVKQIESGVNAVQIFDSWASALEKEKFFEFSWDYMVDIAEFLKERYPEIPVILFPKGI 243          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_HAHCH (Uroporphyrinogen decarboxylase OS=Hahella chejuensis (strain KCTC 2396) GN=hemE PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.053e-37
Identity = 81/194 (41.75%), Postives = 122/194 (62.89%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ 589
            + SF +  +N +   E++LQP   F+ D  ILFSDILT    M +      G+GP     + T+A+V+ +   D +  + YV  A+  +R E+N    ++GF G+P+TLA+Y+VEGGSSK F +IK+LA+ QP++LH LL K   S+A Y+  Q   GAQAVQIFD+W   L+   + EFSL Y+K+IV+ +++
Sbjct:   43 AGSFMDLCKNAEFACEVTLQPLERFELDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVRTEADVNALHMPDADTDLGYVMNAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFREIKKLAYGQPELLHLLLDKLADSVADYLNAQIRAGAQAVQIFDTWGGALTAAGYLEFSLAYMKKIVSKLQR 236          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_ACTP72.121e-3838.71Uroporphyrinogen decarboxylase OS=Actinobacillus p... [more]
DCUP_ACTP22.121e-3838.71Uroporphyrinogen decarboxylase OS=Actinobacillus p... [more]
DCUP_GEOSF2.770e-3842.93Uroporphyrinogen decarboxylase OS=Geobacter sp. (s... [more]
DCUP_CHLP82.770e-3839.18Uroporphyrinogen decarboxylase OS=Chlorobaculum pa... [more]
DCUP_PSEHT4.725e-3841.58Uroporphyrinogen decarboxylase OS=Pseudoalteromona... [more]
DCUP_DESPS6.171e-3841.18Uroporphyrinogen decarboxylase OS=Desulfotalea psy... [more]
DCUP_THET88.060e-3838.83Uroporphyrinogen decarboxylase OS=Thermus thermoph... [more]
DCUP_THET28.060e-3838.83Uroporphyrinogen decarboxylase OS=Thermus thermoph... [more]
DCUP_NITSB8.060e-3840.00Uroporphyrinogen decarboxylase OS=Nitratiruptor sp... [more]
DCUP_HAHCH1.053e-3741.75Uroporphyrinogen decarboxylase OS=Hahella chejuens... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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