EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VIBVY (Uroporphyrinogen decarboxylase OS=Vibrio vulnificus (strain YJ016) GN=hemE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.375e-37
Identity = 77/190 (40.53%), Postives = 121/190 (63.68%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP+  +PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+  FSL Y+ +IV+
Sbjct:   43 AGDFMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFSTGEGPIFDNPITCKADVEKIGVPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VIBVU (Uroporphyrinogen decarboxylase OS=Vibrio vulnificus GN=hemE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.375e-37
Identity = 77/190 (40.53%), Postives = 121/190 (63.68%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP+  +PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+  FSL Y+ +IV+
Sbjct:   43 AGDFMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFSTGEGPIFDNPITCKADVEKIGVPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VIBHB (Uroporphyrinogen decarboxylase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hemE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.375e-37
Identity = 78/190 (41.05%), Postives = 120/190 (63.16%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GPV   PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+  FSL Y+ +IV+
Sbjct:   43 AGDFMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SALRD (Uroporphyrinogen decarboxylase OS=Salinibacter ruber (strain DSM 13855) GN=hemE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.375e-37
Identity = 79/205 (38.54%), Postives = 121/205 (59.02%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASG 628
            SF E  E  +L  E+++QP   F  D  ILF DI+     M +   ++ G+GP    P+ T  E++++ E D E ++ +V +ALT+ R E+     ++GF GAP+TL +Y+VEGG SK +   +R  +  P    ALL++ T  + +Y+  Q D GAQ +Q+FDSWA   +P +F  F LPYL +I   VK  HPD+ L+++A G
Sbjct:   47 SFFEVVETPELAAEVTIQPVERFSLDAAILFCDIMVVPEAMGLTVKMVSGQGPTFPKPLTTPDEMERLVEPDVESALGHVFEALTVTRHELAGRVPLIGFSGAPWTLMAYMVEGGGSKSYRAARRWLYRHPDASKALLQRTTDVIVEYLIRQVDAGAQMLQVFDSWAGLHTPENFRTFCLPYLAEIATRVKAAHPDVPLVIFAKG 251          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_MANSM (Uroporphyrinogen decarboxylase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=hemE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.375e-37
Identity = 83/214 (38.79%), Postives = 127/214 (59.35%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHP----DLSLILYASGIWV 637
            +  F     N DL  E++LQP   ++ D  ILFSDILT    M +      G+GP    PI T + V+ +   DPE+ + YV  A+  +R E+N E  ++GF G+P+TLA+Y+VEGGS+K F+KIK++ +++PK+LH LL K   S+  Y+  Q   GAQAV IFD+W   L   ++ +FSL Y+ +IVN + + +      ++L     G+W+
Sbjct:   43 AGDFMSLCRNADLACEVTLQPLRRYELDAAILFSDILTIPDAMGLGLTFGAGEGPKFDRPIETKSAVENLPIPDPEQELQYVMNAVRTIRRELNGEVPLIGFSGSPWTLATYMVEGGSTKAFTKIKKMMYAEPKLLHKLLDKVADSVVLYLNAQIKAGAQAVMIFDTWGGVLGHREYLDFSLQYMHKIVNGLIRENDGRKVPVTLFTKGGGLWL 256          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_GEOUR (Uroporphyrinogen decarboxylase OS=Geobacter uraniireducens (strain Rf4) GN=hemE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.375e-37
Identity = 80/191 (41.88%), Postives = 121/191 (63.35%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  +F E  +  +L  E+S+QP  +   D  ILFSDILTP+  M +  D + G  PV   PI T A+V+++R    E+ VPYV + + ILR E+ N+  ++GF GAPFTLA Y+VEG  SK ++ +KR+ ++ P+V  AL+ K T    +Y+  Q   GAQA+QIFD+W   L+P D+E++ LPY  +++N
Sbjct:   37 SKCTFLELCKTPELAAEVSIQPVDILGVDAAILFSDILTPVEPMGMALDFVPG--PVFEHPIRTMADVEKLRIPQMEQDVPYVLETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATMKRMMYAAPEVYAALMEKVTMMDMEYLNAQIKAGAQAIQIFDTWGGVLAPSDYEKYVLPYTTKLIN 225          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VIBPA (Uroporphyrinogen decarboxylase OS=Vibrio parahaemolyticus GN=hemE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.796e-37
Identity = 78/190 (41.05%), Postives = 120/190 (63.16%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GPV  +PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K   S+  Y+  Q   GAQ+V +FD+W   L+P D+  FSL Y+ +IV+
Sbjct:   43 AGDFMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIDYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHESR (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain MR-7) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.796e-37
Identity = 82/217 (37.79%), Postives = 129/217 (59.45%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVACL 646
            +  F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + +        ++L     G+W+  +
Sbjct:   43 AGDFMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWLEAM 259          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHESM (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain MR-4) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.796e-37
Identity = 82/217 (37.79%), Postives = 129/217 (59.45%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVACL 646
            +  F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + +        ++L     G+W+  +
Sbjct:   43 AGDFMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWLEAM 259          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHESA (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain ANA-3) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.796e-37
Identity = 82/217 (37.79%), Postives = 129/217 (59.45%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVACL 646
            +  F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + +        ++L     G+W+  +
Sbjct:   43 AGDFMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWLEAM 259          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_VIBVY1.375e-3740.53Uroporphyrinogen decarboxylase OS=Vibrio vulnificu... [more]
DCUP_VIBVU1.375e-3740.53Uroporphyrinogen decarboxylase OS=Vibrio vulnificu... [more]
DCUP_VIBHB1.375e-3741.05Uroporphyrinogen decarboxylase OS=Vibrio harveyi (... [more]
DCUP_SALRD1.375e-3738.54Uroporphyrinogen decarboxylase OS=Salinibacter rub... [more]
DCUP_MANSM1.375e-3738.79Uroporphyrinogen decarboxylase OS=Mannheimia succi... [more]
DCUP_GEOUR1.375e-3741.88Uroporphyrinogen decarboxylase OS=Geobacter uranii... [more]
DCUP_VIBPA1.796e-3741.05Uroporphyrinogen decarboxylase OS=Vibrio parahaemo... [more]
DCUP_SHESR1.796e-3737.79Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]
DCUP_SHESM1.796e-3737.79Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]
DCUP_SHESA1.796e-3737.79Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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