EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_NAUPA (Uroporphyrinogen decarboxylase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.796e-37
Identity = 77/206 (37.38%), Postives = 125/206 (60.68%), Query Frame = 2
Query:   14 SFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGI 631
            +F + + N ++V E+++QP  +   D  ILFSDIL     M +P    KG GPV    I+T+ +++ + +   +E + YV K + ++RE +  E A++GF G+P+T+A+Y+VEG  SK ++KIK++ +S P +LH LL   T    +Y+  Q D GA AV +FDSW   L    F EFS  Y+K+I   +K  +P + +IL++ G+
Sbjct:   39 NFLDMTRNPEVVAEVTIQPIDILDVDAAILFSDILNLPMEMGLPLRFEKGVGPVFDKTIDTEEDIEAL-DSSADEKLEYVYKGVKLIRERLPEEKALIGFAGSPWTIATYMVEGRGSKQYAKIKKMVYSNPMMLHRLLAFNTKETIEYLSKQIDAGANAVMVFDSWGGALEKEKFFEFSWNYMKEIAKNIKAKYPHIPVILFSKGV 243          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSM (Uroporphyrinogen decarboxylase OS=Geobacter sp. (strain M21) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.796e-37
Identity = 80/197 (40.61%), Postives = 123/197 (62.44%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTH 595
            +  +F E  +  +L  E+++QP  +   D  ILFSDILTP+  M +  D   G  PV   PI T A+V+ ++    E  VPYV  A+ +LR+E+  +  ++GF GAPFTLA Y+VEG  SK F+ +K++ ++ P+V  AL+ K TT   +Y+  Q   GAQA+QIFD+W   LSP D+E + LPY ++++N + +T+
Sbjct:   37 SKCTFLELCKTPELATEVTVQPVDILGVDAAILFSDILTPIEPMGMELDFTPG--PVFAKPIRTMADVEALKIPKMETDVPYVLDAVKLLRKELAAKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVYAALMEKITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRTN 231          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_GEOBB (Uroporphyrinogen decarboxylase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.796e-37
Identity = 80/197 (40.61%), Postives = 123/197 (62.44%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTH 595
            +  +F E  +  +L  E+++QP  +   D  ILFSDILTP+  M +  D   G  PV   PI T A+V+ ++    E  VPYV  A+ +LR+E+  +  ++GF GAPFTLA Y+VEG  SK F+ +K++ ++ P+V  AL+ K TT   +Y+  Q   GAQA+QIFD+W   LSP D+E + LPY ++++N + +T+
Sbjct:   37 SKCTFLELCKTPELATEVTVQPVDILGVDAAILFSDILTPIEPMGMELDFTPG--PVFAKPIRTMADVEALKIPKMETDVPYVLDAVKLLRKELATKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVYAALMDKITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRTN 231          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_XYLFA (Uroporphyrinogen decarboxylase OS=Xylella fastidiosa GN=hemE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.345e-37
Identity = 80/194 (41.24%), Postives = 120/194 (61.86%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ 589
            + SF + ++  +L  EI+LQP H F  D  ILFSDIL     M +    I+G+GP +  PI   A + Q+   D E  + YV  A+ ++R+E++N   ++GF G+P+TLA Y++EGGSSK ++ IK +AF+ P VLH LL   T ++  Y+  Q   GAQA+Q+FD+W   LSP  +  FSLPYL +I   +++
Sbjct:   41 AGSFLKMAKTPELACEITLQPLHRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRYVMDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYAHIKAMAFNAPDVLHQLLNTVTNAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRIARELER 234          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHEON (Uroporphyrinogen decarboxylase OS=Shewanella oneidensis GN=hemE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.345e-37
Identity = 82/217 (37.79%), Postives = 129/217 (59.45%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVACL 646
            +  F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + +        ++L     G+W+  +
Sbjct:   43 AGDFMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWLEAM 259          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SERP5 (Uroporphyrinogen decarboxylase OS=Serratia proteamaculans (strain 568) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.345e-37
Identity = 79/190 (41.58%), Postives = 117/190 (61.58%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI + A+VD++  FDPE  + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+K+K++ +++P  LH LL K   S+  Y+  Q   GAQ+V +FD+W   L+  D+ EFSL Y+ +IV+
Sbjct:   43 AGDFMSLCKNAELACEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITSRADVDKLPAFDPEVELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPATLHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CHLTE (Uroporphyrinogen decarboxylase OS=Chlorobium tepidum GN=hemE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.345e-37
Identity = 75/194 (38.66%), Postives = 127/194 (65.46%), Query Frame = 2
Query:   41 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYA 622
            +L  E+++QP  +   D  I+FSDIL     M +  +II+ KG  +  PI + A++D++ + D +E + YV  A+ + ++E+N+   ++GF GA +TL +Y VEGG SK+++  K++ + +PK+ H LL+K +  ++ Y+  Q + GA A+QIFDSWA+ LS  D+ EF+LPY+KQ V  VK  +P++ +I +A
Sbjct:   51 ELACEVTIQPVDLMGVDAAIIFSDILVVNEAMGMNVEIIETKGIKLTPPIRSQADIDKLIDPDIDEKLGYVLDAIRLAKKELNDRVPLIGFSGAAWTLFTYAVEGGGSKNYTWAKKMMYREPKMAHQLLQKISDCISAYLVKQVEAGADAIQIFDSWASALSEDDYREFALPYIKQNVAAVKAAYPEIPVIAFA 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_PHOPR (Uroporphyrinogen decarboxylase OS=Photobacterium profundum GN=hemE PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 3.063e-37
Identity = 79/190 (41.58%), Postives = 118/190 (62.11%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P  LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+ EFSL Y+ +IV+
Sbjct:   43 AGDFMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDKLADSVVEYLNAQIKAGAQSVMVFDTWGGVLTPSDYNEFSLRYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CAMLR (Uroporphyrinogen decarboxylase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.063e-37
Identity = 78/195 (40.00%), Postives = 129/195 (66.15%), Query Frame = 2
Query:   53 EISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGI 631
            E++LQP  +   D  I+FSDIL  PL  GM++ F+  KG+GPV  +PI T  +++++      +++ YV  AL + RE++ ++ A++GF G+P+T+A+Y++EGG SK+++K K+L +  P+ LH +L K T ++  Y+Q Q   GA AVQIFDSWA+ L    F EFS  Y+ +I + +K+ +P + +IL+  G+
Sbjct:   52 EVTLQPVDILGVDAAIIFSDILVVPLEMGMDLKFE--KGEGPVFSNPIKTKEDLERLDVEKSIKNLSYVYDALALTREKLAHDKALIGFCGSPWTIATYMIEGGGSKNYAKCKKLVYQNPEFLHQILSKLTLALKHYIQEQIKAGANAVQIFDSWASALEEEMFFEFSFKYMLEIADFIKEKYPHIPVILFPKGV 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ACTPJ (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.063e-37
Identity = 82/217 (37.79%), Postives = 126/217 (58.06%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHP----DLSLILYASGIWVACL 646
            +  F     N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    PI   A+VD +   DPE  + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ ++ P++LHALL K   S+  Y+  Q   GAQAV +FD+W   L+  +++ FSL Y+ +IV+ + + +      ++L     G+W+  +
Sbjct:   43 AGDFMALCRNADLACEVTLQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQILHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKAFSLRYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAI 259          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_NAUPA1.796e-3737.38Uroporphyrinogen decarboxylase OS=Nautilia profund... [more]
DCUP_GEOSM1.796e-3740.61Uroporphyrinogen decarboxylase OS=Geobacter sp. (s... [more]
DCUP_GEOBB1.796e-3740.61Uroporphyrinogen decarboxylase OS=Geobacter bemidj... [more]
DCUP_XYLFA2.345e-3741.24Uroporphyrinogen decarboxylase OS=Xylella fastidio... [more]
DCUP_SHEON2.345e-3737.79Uroporphyrinogen decarboxylase OS=Shewanella oneid... [more]
DCUP_SERP52.345e-3741.58Uroporphyrinogen decarboxylase OS=Serratia proteam... [more]
DCUP_CHLTE2.345e-3738.66Uroporphyrinogen decarboxylase OS=Chlorobium tepid... [more]
DCUP_PHOPR3.063e-3741.58Uroporphyrinogen decarboxylase OS=Photobacterium p... [more]
DCUP_CAMLR3.063e-3740.00Uroporphyrinogen decarboxylase OS=Campylobacter la... [more]
DCUP_ACTPJ3.063e-3737.79Uroporphyrinogen decarboxylase OS=Actinobacillus p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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