EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHELP (Uroporphyrinogen decarboxylase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.000e-37
Identity = 83/218 (38.07%), Postives = 128/218 (58.72%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPD-----LSLILYASGIWVACL 646
            +  F     N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   ++  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + + H D     ++L     G+W+  +
Sbjct:   43 AGDFMSLCRNAELACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTLDAIKKLAVPDPEDELGYVMKAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADAVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTR-HADGRQVPVTLFTKGGGLWLEAM 259          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CAMJD (Uroporphyrinogen decarboxylase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.000e-37
Identity = 77/195 (39.49%), Postives = 129/195 (66.15%), Query Frame = 2
Query:   53 EISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGI 631
            E+SLQP  +   D  I+FSDIL  PL  GMN+ F+  KG+GP+  +PI+T  +++++ + +  + + YV  AL + RE+++   A++GF G+P+T+A+Y++EG  SK+++K K++ +  P++LH +L K T  +  Y++ Q   GA A+QIFDSWA+ L    F EFS  Y+ +I N +K  +P++ +IL+  GI
Sbjct:   52 EVSLQPIDILNVDAAIIFSDILVVPLEMGMNLRFE--KGEGPIFDNPISTLEDLEKLDDQNAHKKLNYVYNALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFSYMLEISNFIKSKYPNIPVILFPKGI 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_XYLFT (Uroporphyrinogen decarboxylase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.224e-37
Identity = 84/215 (39.07%), Postives = 128/215 (59.53%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVA 640
            + SF + ++  +L  EI+LQP   F  D  ILFSDIL     M +    I+G+GP +  PI   A + Q+   D E  + YV  A+ ++R+E++N   ++GF G+P+TLA Y++EGGSSK +++IK +AF+ P VLH LL   T ++  Y+  Q   GAQA+Q+FD+W   LSP  +  FSLPYL +I   +++     H  L L    +G ++A
Sbjct:   41 AGSFLKMAKTPELACEITLQPLRRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRYVMDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYARIKAMAFNAPDVLHQLLNTVTDAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRIARELERGTGTEHTPLVLFGKGNGPYIA 255          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_XYLF2 (Uroporphyrinogen decarboxylase OS=Xylella fastidiosa (strain M23) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.224e-37
Identity = 84/215 (39.07%), Postives = 128/215 (59.53%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVA 640
            + SF + ++  +L  EI+LQP   F  D  ILFSDIL     M +    I+G+GP +  PI   A + Q+   D E  + YV  A+ ++R+E++N   ++GF G+P+TLA Y++EGGSSK +++IK +AF+ P VLH LL   T ++  Y+  Q   GAQA+Q+FD+W   LSP  +  FSLPYL +I   +++     H  L L    +G ++A
Sbjct:   41 AGSFLKMAKTPELACEITLQPLRRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRYVMDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYARIKAMAFNAPDVLHQLLNTVTDAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRIARELERGTGTEHTPLVLFGKGNGPYIA 255          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VIBFM (Uroporphyrinogen decarboxylase OS=Vibrio fischeri (strain MJ11) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.224e-37
Identity = 79/190 (41.58%), Postives = 118/190 (62.11%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P  LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+ EFSL Y+ +IV+
Sbjct:   43 AGDFMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_VIBF1 (Uroporphyrinogen decarboxylase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.224e-37
Identity = 79/190 (41.58%), Postives = 118/190 (62.11%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P  LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+ EFSL Y+ +IV+
Sbjct:   43 AGDFMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVD 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CHLSY (Uroporphyrinogen decarboxylase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.224e-37
Identity = 81/212 (38.21%), Postives = 124/212 (58.49%), Query Frame = 2
Query:   17 FRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGIWVACLRG 652
            F +  +  ++  E++LQP   F  D  I+F+DIL PL G+ +     KG+GPVI +PI +  +V  +R  DP E+V Y   AL +++ E+N    ++GF GAPFTLASY +EGG S+ +   KR  + QP   H L+ + +  +A Y+  Q + GA AVQIFDSWA  LSP D+  + L + + +V T++    D++  +   G  +A L G
Sbjct:   41 FLQMVKTPEVAAEVTLQPVQAFGVDAAIIFADILPPLEGLGLQLTYEKGEGPVIHNPIRSPHDVSVLRSCDPRETVAYTLAALQLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSREYRLTKRFMYEQPAAWHDLMERLSRLVADYLIAQIEAGADAVQIFDSWAGALSPADYRAYVLRHTQALVQTIRARLGDVTPPIIYFGTDMAGLAG 251          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CHLAA (Uroporphyrinogen decarboxylase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.224e-37
Identity = 81/212 (38.21%), Postives = 124/212 (58.49%), Query Frame = 2
Query:   17 FRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGIWVACLRG 652
            F +  +  ++  E++LQP   F  D  I+F+DIL PL G+ +     KG+GPVI +PI +  +V  +R  DP E+V Y   AL +++ E+N    ++GF GAPFTLASY +EGG S+ +   KR  + QP   H L+ + +  +A Y+  Q + GA AVQIFDSWA  LSP D+  + L + + +V T++    D++  +   G  +A L G
Sbjct:   41 FLQMVKTPEVAAEVTLQPVQAFGVDAAIIFADILPPLEGLGLQLTYEKGEGPVIHNPIRSPHDVSVLRSCDPRETVAYTLAALQLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSREYRLTKRFMYEQPAAWHDLMERLSRLVADYLIAQIEAGADAVQIFDSWAGALSPADYRAYVLRHTQALVQTIRARLGDVTPPIIYFGTDMAGLAG 251          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHESW (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain W3-18-1) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.823e-37
Identity = 82/217 (37.79%), Postives = 128/217 (58.99%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVACL 646
            +  F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + +        ++L     G+W+  +
Sbjct:   43 AGDFMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWLEAM 259          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHEPC (Uroporphyrinogen decarboxylase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.823e-37
Identity = 82/217 (37.79%), Postives = 128/217 (58.99%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVACL 646
            +  F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + +        ++L     G+W+  +
Sbjct:   43 AGDFMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWLEAM 259          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_SHELP4.000e-3738.07Uroporphyrinogen decarboxylase OS=Shewanella loihi... [more]
DCUP_CAMJD4.000e-3739.49Uroporphyrinogen decarboxylase OS=Campylobacter je... [more]
DCUP_XYLFT5.224e-3739.07Uroporphyrinogen decarboxylase OS=Xylella fastidio... [more]
DCUP_XYLF25.224e-3739.07Uroporphyrinogen decarboxylase OS=Xylella fastidio... [more]
DCUP_VIBFM5.224e-3741.58Uroporphyrinogen decarboxylase OS=Vibrio fischeri ... [more]
DCUP_VIBF15.224e-3741.58Uroporphyrinogen decarboxylase OS=Vibrio fischeri ... [more]
DCUP_CHLSY5.224e-3738.21Uroporphyrinogen decarboxylase OS=Chloroflexus aur... [more]
DCUP_CHLAA5.224e-3738.21Uroporphyrinogen decarboxylase OS=Chloroflexus aur... [more]
DCUP_SHESW6.823e-3737.79Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]
DCUP_SHEPC6.823e-3737.79Uroporphyrinogen decarboxylase OS=Shewanella putre... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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