EY674961

Overview
NameEY674961
Unique NameEY674961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ECO81 (Uroporphyrinogen decarboxylase OS=Escherichia coli O81 (strain ED1a) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.823e-37
Identity = 79/190 (41.58%), Postives = 117/190 (61.58%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVN 577
            +  F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVN
Sbjct:   43 AGDFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVN 232          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CHLT3 (Uroporphyrinogen decarboxylase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.823e-37
Identity = 75/206 (36.41%), Postives = 126/206 (61.17%), Query Frame = 2
Query:    5 ASASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYA 622
            + A F    +  +L  E+++QP  +   D  I+FSDIL     M +  +II+ KGP +++PI + A++D++   D  + + YV  A+ + ++++++   ++GF GA +TL +Y VEGG SK++   K L ++ P   H LL K +  +  ++  Q + G  AVQIFDSWA+ LS  D++ F+LPY+KQ V  VK  HPD+ +I++A
Sbjct:   39 SKADFVTLCKTPELAAEVTVQPIDIIGLDAAIIFSDILVIPEAMGMGLEIIESKGPRLYEPIRSAADIDRLVVPDVADKLGYVADAIRLTKKQLDDRVPLIGFAGAAWTLFTYAVEGGGSKNYRFAKELIYNHPDQAHKLLGKISQVITDFLLLQIEVGVNAVQIFDSWASALSEDDYKTFALPYIKQSVEAVKSKHPDIPVIVFA 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CAMJR (Uroporphyrinogen decarboxylase OS=Campylobacter jejuni (strain RM1221) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.823e-37
Identity = 78/195 (40.00%), Postives = 129/195 (66.15%), Query Frame = 2
Query:   53 EISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGI 631
            E+SLQP  +   D  I+FSDIL  PL  GMN+ F+  KG+GPV  +PI+T  +++++ + +  + + YV  AL + RE+++   A++GF G+P+T+A+Y++EG  SK+++K K++ +  P++LH +L K T  +  Y++ Q   GA A+QIFDSWA+ L    F EFS  Y+ +I N +K  +P++ +IL+  GI
Sbjct:   52 EVSLQPIDILDVDAAIIFSDILVVPLEMGMNLRFE--KGEGPVFDNPISTLEDLEKLDDQNAHKKLNYVYDALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFPKGI 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CAMJE (Uroporphyrinogen decarboxylase OS=Campylobacter jejuni GN=hemE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.823e-37
Identity = 78/195 (40.00%), Postives = 129/195 (66.15%), Query Frame = 2
Query:   53 EISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGI 631
            E+SLQP  +   D  I+FSDIL  PL  GMN+ F+  KG+GPV  +PI+T  +++++ + +  + + YV  AL + RE+++   A++GF G+P+T+A+Y++EG  SK+++K K++ +  P++LH +L K T  +  Y++ Q   GA A+QIFDSWA+ L    F EFS  Y+ +I N +K  +P++ +IL+  GI
Sbjct:   52 EVSLQPIDILDVDAAIIFSDILVVPLEMGMNLRFE--KGEGPVFGNPISTLEDLEKLDDQNAHKKLNYVYDALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFPKGI 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_CAMJ8 (Uroporphyrinogen decarboxylase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.823e-37
Identity = 78/195 (40.00%), Postives = 129/195 (66.15%), Query Frame = 2
Query:   53 EISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPDLSLILYASGI 631
            E+SLQP  +   D  I+FSDIL  PL  GMN+ F+  KG+GPV  +PI+T  +++++ + +  + + YV  AL + RE+++   A++GF G+P+T+A+Y++EG  SK+++K K++ +  P++LH +L K T  +  Y++ Q   GA A+QIFDSWA+ L    F EFS  Y+ +I N +K  +P++ +IL+  GI
Sbjct:   52 EVSLQPIDILDVDAAIIFSDILVVPLEMGMNLRFE--KGEGPVFDNPISTLEDLEKLDDQNAHKKLNYVYDALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFPKGI 244          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_ALISL (Uroporphyrinogen decarboxylase OS=Aliivibrio salmonicida (strain LFI1238) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.823e-37
Identity = 81/214 (37.85%), Postives = 128/214 (59.81%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHP----DLSLILYASGIWV 637
            +  F    +N  L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P +LH LL K   ++ +Y+  Q   GAQ+V +FD+W   L+P D+ EFSL Y+ +IV+ + + +      ++L     G+W+
Sbjct:   43 AGDFMSLCKNAGLASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPAILHLLLDKLADTVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVDALIRENEGRRVPVTLFTKNGGMWL 256          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_XANOM (Uroporphyrinogen decarboxylase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.911e-37
Identity = 82/217 (37.79%), Postives = 129/217 (59.45%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWVACL 646
            + SF   ++N D+  E++LQP   F  D  ILFSDILT    M +    ++G+GP    P+   A + ++   D E  + YV  A+ ++R E++    ++GF G+P+TLA Y++EGG SK +++IK +AF+ P+VLH LL   T ++  Y+  Q   GAQA+Q+FD+W   LSP  + EFSLPYL +I + +++        L L    +G++VA L
Sbjct:   41 AGSFLSMAKNPDIACEVTLQPLQRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRYVMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHLLGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYHEFSLPYLTRIAHELERGEGAERTPLVLFGKGNGVYVADL 257          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHEPA (Uroporphyrinogen decarboxylase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.911e-37
Identity = 84/215 (39.07%), Postives = 127/215 (59.07%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPD-----LSLILYASGIWV 637
            +  F    +N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+ +P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + + H D     ++L     G+W+
Sbjct:   43 AGDFMSLCKNQDLACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDSIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTR-HADGRQVPVTLFTKGGGLWL 256          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHEHH (Uroporphyrinogen decarboxylase OS=Shewanella halifaxensis (strain HAW-EB4) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.911e-37
Identity = 84/215 (39.07%), Postives = 127/215 (59.07%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQTHPD-----LSLILYASGIWV 637
            +  F    +N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+ +P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + + H D     ++L     G+W+
Sbjct:   43 AGDFMSLCKNQDLACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTIDSIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTR-HADGRQVPVTLFTKGGGLWL 256          
BLAST of EY674961 vs. ExPASy Swiss-Prot
Match: DCUP_SHEDO (Uroporphyrinogen decarboxylase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.911e-37
Identity = 82/214 (38.32%), Postives = 127/214 (59.35%), Query Frame = 2
Query:    8 SASFRESSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVNTVKQ----THPDLSLILYASGIWV 637
            +  F     N +L  E++LQP   +K D  ILFSDILT    M +     +G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + EFSL Y+++IV+ + +        ++L     G+W+
Sbjct:   43 AGDFMSLCRNAELACEVTLQPLRRYKLDAAILFSDILTVPDAMGLGLYFEEGEGPRFERPTDTVDAIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWL 256          
The following BLAST results are available for this feature:
BLAST of EY674961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_ECO816.823e-3741.58Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_CHLT36.823e-3736.41Uroporphyrinogen decarboxylase OS=Chloroherpeton t... [more]
DCUP_CAMJR6.823e-3740.00Uroporphyrinogen decarboxylase OS=Campylobacter je... [more]
DCUP_CAMJE6.823e-3740.00Uroporphyrinogen decarboxylase OS=Campylobacter je... [more]
DCUP_CAMJ86.823e-3740.00Uroporphyrinogen decarboxylase OS=Campylobacter je... [more]
DCUP_ALISL6.823e-3737.85Uroporphyrinogen decarboxylase OS=Aliivibrio salmo... [more]
DCUP_XANOM8.911e-3737.79Uroporphyrinogen decarboxylase OS=Xanthomonas oryz... [more]
DCUP_SHEPA8.911e-3739.07Uroporphyrinogen decarboxylase OS=Shewanella peale... [more]
DCUP_SHEHH8.911e-3739.07Uroporphyrinogen decarboxylase OS=Shewanella halif... [more]
DCUP_SHEDO8.911e-3738.32Uroporphyrinogen decarboxylase OS=Shewanella denit... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674961 ID=EY674961; Name=EY674961; organism=Citrus sinensis; type=EST; length=975bp
CCACGCGTCCGCTTCATTTCGTGAAAGCTCAGAAAATGTTGATCTTGTTG
TGGAAATTTCTCTTCAGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATT
TTATTCTCAGACATTTTAACTCCTCTTTCTGGGATGAATATACCTTTTGA
CATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTATAAACACAGATG
CAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGTCAGTTCCATAT
GTTGGGAAAGCATTGACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGC
AGTTCTGGGTTTTGTTGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTG
AGGGTGGTTCATCGAAGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCT
CAACCCAAGGTCCTCCATGCATTGCTTCGGAAATTTACAACCTCTATGGC
AAAGTATGTACAATACCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCT
TCGATTCATGGGCCACGGAGCTCAGTCCTGTTGATTTTGAAGAGTTTAGT
CTGCCTTACTTGAAGCAAATTGTAAACACTGTGAAACAAACACATCCTGA
TCTCTCATTAATCCTTTATGCCAGTGGGATCTGGGTGGCTTGCTTGAGAG
GCTAACTTTTGAAAGGTGGGGAATGGTGTTAGCCTTGGAACGGGAAGTTT
AACAGGGCTTGAAGGGTAAACGGGCAACTTTGGGCCCCAACTTTTCCATT
TCAGGGAAAAATTCTAATCCTGGGGGCACTTTTTTCGGTTCAAAAAGAAT
TTCCCTCCCCCAACCCGAAAAAATTGAAACCCGGGGGGGAAAAAGCAGGG
GAAAAAGGAAAACAATATTTTTTTAAAAATTTTGTGGCCCCCGGCGACTT
TAAAAAAAGAAGGGGAACCCCCCCGGGAAAAAAAAAAAATTTGTTTCCCC
TCTTTTTTTTTTTTTCTCTAAAAAA
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