EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_TRIEI (Uroporphyrinogen decarboxylase OS=Trichodesmium erythraeum (strain IMS101) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.130e-36
Identity = 76/154 (49.35%), Postives = 102/154 (66.23%), Query Frame = 3
Query:   33 RFGSGYPGSTHTSASLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            R+   Y        S R    N D+ VEISL P+H   P GVILFSDILTPL  + I FDII+ KGP+I  PI T+A++D++   +PEES+P++ + L  +R EV NE+AVLGF GAP+TL +Y +EG S K +  IK++AF QP++LH  L K
Sbjct:   32 RYMKAYRDLREKYPSFRERSENTDIAVEISLQPFHAFKPDGVILFSDILTPLPAIGIDFDIIESKGPIIDPPIRTEAQIDKLHPIEPEESLPFIREILQTLRREVKNEAAVLGFIGAPWTLAAYAIEGKSCKDYTNIKKMAFCQPEMLHKFLGK 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNSC (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9605) GN=hemE PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.288e-36
Identity = 78/141 (55.32%), Postives = 99/141 (70.21%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  EIS+ P+H   P GVILFSDILTPL GM I FDII+ KGP I DPI + A+VD +R  +P ES+P+VG+ L  +R+ V NE+AVLGF GAP+TL +Y VEG SSK++  IK + F +P++LH LL  F
Sbjct:   44 SFRERSENPDLSYEISMQPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMAQVDALRPLNPSESMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMVFREPEILHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNP6 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemE PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.609e-36
Identity = 74/131 (56.49%), Postives = 94/131 (71.76%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L +EISL P+    P GVILFSDILTPL GM IPFDII+ KGP++  PI T  +V  V + DPEE+ P++   L  +R+EV NE+AVLGF GAP+TL +Y +EG SSK +  IK LAFS+P +LH LL K
Sbjct:   55 ELAIEISLQPFRAFKPDGVILFSDILTPLPGMGIPFDIIESKGPILEPPIRTAEQVAAVHDLDPEEATPFIRPILETLRQEVGNEAAVLGFAGAPWTLAAYAIEGKSSKTYANIKHLAFSEPTILHELLGK 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNE7 (Uroporphyrinogen decarboxylase OS=Synechococcus elongatus (strain PCC 7942) GN=hemE PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 5.609e-36
Identity = 74/131 (56.49%), Postives = 94/131 (71.76%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L +EISL P+    P GVILFSDILTPL GM IPFDII+ KGP++  PI T  +V  V + DPEE+ P++   L  +R+EV NE+AVLGF GAP+TL +Y +EG SSK +  IK LAFS+P +LH LL K
Sbjct:   55 ELAIEISLQPFRAFKPDGVILFSDILTPLPGMGIPFDIIESKGPILEPPIRTAEQVAAVHDLDPEEATPFIRPILETLRQEVGNEAAVLGFAGAPWTLAAYAIEGKSSKTYANIKHLAFSEPTILHELLGK 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROMS (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain AS9601) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.567e-36
Identity = 74/141 (52.48%), Postives = 103/141 (73.05%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N +L  EIS+ P+H   P GVILFSDILTPL GM I F+II+ KGP+I DPI T  +V+ +RE +P ES+ +VG+ L+ ++++VNNE+ +LGF GAP+TL +Y VEG SSK+++ IK +AF++P +LH LL  F
Sbjct:   44 SFRERSENPELSYEISMQPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRTLNQVENLRELNPSESLSFVGQVLSSLKKDVNNEATILGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFNEPDLLHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROM0 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.567e-36
Identity = 75/141 (53.19%), Postives = 102/141 (72.34%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N +L  EIS+ P+H   P GVILFSDILTPL GM I F+II+ KGP+I DPI T  +V+ ++E  P ES+ +VG+ LT ++++VNNE+ VLGF GAP+TL +Y VEG SSK+++ IK +AF++P +LH LL  F
Sbjct:   44 SFRERSENPELSYEISMQPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRTLNQVENLKELSPSESLSFVGEVLTSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFNKPDLLHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROM9 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.249e-35
Identity = 73/141 (51.77%), Postives = 103/141 (73.05%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N +L  EIS+ P+H   P GVILFSDILTPL GM I F+II+ KGP+I DPI T ++++ ++E +P ES+ +VG+ L+ ++++VNNE+ VLGF GAP+TL +Y VEG SSK+++ IK +AF +P +LH LL  F
Sbjct:   44 SFRERSENPELSYEISMQPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRTLSQIESLKELNPSESLSFVGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNPX (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain WH8102) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.632e-35
Identity = 78/141 (55.32%), Postives = 99/141 (70.21%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  EIS+ P+H   P GVILFSDILTPL GM I FDII+ KGP I DPI +  +V+ +R  +P ES+P+VG+ L  +RE V NE+AVLGF GAP+TL +Y VEG SSK++  IK +AF +P++LH LL  F
Sbjct:   44 SFRERSENPDLSYEISMQPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMDQVNALRPLNPSESMPFVGEVLGRLRESVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPELLHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNPW (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain WH7803) GN=hemE PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.784e-35
Identity = 78/141 (55.32%), Postives = 98/141 (69.50%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  EIS+ P++   P GVILFSDILTPL GM I FDII+ KGP I DPI T A+VD +   +P ES+P+VG+ L  +R+ V NE+AVLGF GAP+TL +Y VEG SSK++  IK +AF +P +LH LL  F
Sbjct:   44 SFRERSENPDLSYEISMQPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRTMAQVDALHPLNPAESMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPALLHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNS3 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9311) GN=hemE PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.748e-35
Identity = 76/143 (53.15%), Postives = 100/143 (69.93%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNT 503
            S R    N DL  EIS+ P+    P GVILFSDILTPL GM I FDI++ KGP I DPI + ++V+ +R   PEES+P+VG+ L  +R  V N++AVLGF GAP+TL +Y VEG SSK++  IK++AF +P++LH LL  F T
Sbjct:   44 SFRERSENPDLSYEISMQPFKAFQPDGVILFSDILTPLPGMGIEFDIVESKGPQIGDPIRSLSQVEALRPLQPEESMPFVGEVLGRLRSSVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKKMAFQEPELLHKLLDHFAT 186          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_TRIEI1.130e-3649.35Uroporphyrinogen decarboxylase OS=Trichodesmium er... [more]
DCUP_SYNSC3.288e-3655.32Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_SYNP65.609e-3656.49Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_SYNE75.609e-3656.49Uroporphyrinogen decarboxylase OS=Synechococcus el... [more]
DCUP_PROMS9.567e-3652.48Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_PROM09.567e-3653.19Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_PROM91.249e-3551.77Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_SYNPX1.632e-3555.32Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_SYNPW2.784e-3555.32Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_SYNS34.748e-3553.15Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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