EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHESR (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain MR-7) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.096e-21
Identity = 54/133 (40.60%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHESM (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain MR-4) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.096e-21
Identity = 54/133 (40.60%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHESA (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain ANA-3) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.096e-21
Identity = 54/133 (40.60%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_CHLAD (Uroporphyrinogen decarboxylase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.096e-21
Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            ++  E++L P         I+F+DIL PL G+ +     KG+GPVI +PI    +V  +   DP E+V Y   A+ +++ E+N    ++GF GAPFTL SY +EGG SK +   KR  + QP   H L+++  TL
Sbjct:   49 EIAAEVTLQPIAAFGVDAAIIFADILPPLEGLGLRLTYEKGEGPVIHNPIRHPHDVATLHPCDPRETVAYTLDAVRLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSKEYRLTKRFMYEQPTAWHDLMERLGTL 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_CELJU (Uroporphyrinogen decarboxylase OS=Cellvibrio japonicus (strain Ueda107) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.096e-21
Identity = 49/131 (37.40%), Postives = 79/131 (60.31%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N +L  E++L P         ILFSDILT    M +      G+GP     + T+A+V+ ++  +PE+ +PYV  A+  +R E+N    ++GF G+P+TL +Y +EGGSS+ F + K + ++QP+V+H LL
Sbjct:   52 NPELACEVTLQPLERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFHKAVRTEADVNALKVINPEQDLPYVVNAVKTIRRELNGRVPLIGFSGSPWTLATYMIEGGSSRDFRRAKEMLYNQPEVMHRLL 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEON (Uroporphyrinogen decarboxylase OS=Shewanella oneidensis GN=hemE PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.656e-21
Identity = 54/133 (40.60%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHELP (Uroporphyrinogen decarboxylase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=hemE PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.656e-21
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NAELACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTLDAIKKLAVPDPEDELGYVMKAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ERWT9 (Uroporphyrinogen decarboxylase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=hemE PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.656e-21
Identity = 51/133 (38.35%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+V+++   DPE+ + YV  A+  +R+ +N E  ++GF G+P+TL +Y VEGGSSK F K+K++ +++P+ LH +L K
Sbjct:   52 NAELACEVTLQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPEQELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLHLMLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BACHD (Uroporphyrinogen decarboxylase OS=Bacillus halodurans GN=hemE PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.656e-21
Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 3
Query:  159 ILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            IL+ DI+TPL  + +  +I  GKGPVI +PI + A+V+++    PEE VPYV   + ++RE++     ++ F GAPFTL SY +EGG SK +NK K   +++PK  H L+ K   +
Sbjct:   72 ILYKDIMTPLPFIGVDVEIKTGKGPVIDNPIQSYADVERLGTIQPEEDVPYVLDTIKLLREQLT--VPLISFAGAPFTLASYMIEGGPSKSYNKTKAFMYAEPKAWHLLMDKLGEM 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VIBFM (Uroporphyrinogen decarboxylase OS=Vibrio fischeri (strain MJ11) GN=hemE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.693e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TL +Y VEGGSSK F KIK++ +++P  LH LL K
Sbjct:   52 NAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDK 184          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_SHESR5.096e-2140.60Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]
DCUP_SHESM5.096e-2140.60Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]
DCUP_SHESA5.096e-2140.60Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]
DCUP_CHLAD5.096e-2137.78Uroporphyrinogen decarboxylase OS=Chloroflexus agg... [more]
DCUP_CELJU5.096e-2137.40Uroporphyrinogen decarboxylase OS=Cellvibrio japon... [more]
DCUP_SHEON6.656e-2140.60Uroporphyrinogen decarboxylase OS=Shewanella oneid... [more]
DCUP_SHELP6.656e-2140.60Uroporphyrinogen decarboxylase OS=Shewanella loihi... [more]
DCUP_ERWT96.656e-2138.35Uroporphyrinogen decarboxylase OS=Erwinia tasmanie... [more]
DCUP_BACHD6.656e-2142.24Uroporphyrinogen decarboxylase OS=Bacillus halodur... [more]
DCUP_VIBFM8.693e-2140.60Uroporphyrinogen decarboxylase OS=Vibrio fischeri ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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