EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VIBF1 (Uroporphyrinogen decarboxylase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hemE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.693e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TL +Y VEGGSSK F KIK++ +++P  LH LL K
Sbjct:   52 NAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEFN (Uroporphyrinogen decarboxylase OS=Shewanella frigidimarina (strain NCIMB 400) GN=hemE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.693e-21
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV +A++ +R E+N    ++GF G+P+TL +Y VEGGSSK F KIKR+A+++P  LH LL K
Sbjct:   52 NAELACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLCIPDPEDELGYVMRAVSTIRRELNGSVPLIGFSGSPWTLATYMVEGGSSKTFEKIKRMAYAEPAALHMLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PHOPR (Uroporphyrinogen decarboxylase OS=Photobacterium profundum GN=hemE PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 8.693e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TL +Y VEGGSSK F KIK++ +++P  LH LL K
Sbjct:   52 NAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ALISL (Uroporphyrinogen decarboxylase OS=Aliivibrio salmonicida (strain LFI1238) GN=hemE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.693e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N  L  E++L P         ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TL +Y VEGGSSK F KIK++ +++P +LH LL K
Sbjct:   52 NAGLASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPAILHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_AERS4 (Uroporphyrinogen decarboxylase OS=Aeromonas salmonicida (strain A449) GN=hemE PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.693e-21
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +     +G+GP    PI + A+V  +   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++ +++P+ LH LL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEQGEGPRFERPIKSMADVQALPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMMYAEPQTLHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ESCF3 (Uroporphyrinogen decarboxylase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.135e-20
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEG SSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGSSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_CITK8 (Uroporphyrinogen decarboxylase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.135e-20
Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  +  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVACKADVDKLPIPDPEDELGYVMNAVRTIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ALHEH (Uroporphyrinogen decarboxylase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.135e-20
Identity = 48/131 (36.64%), Postives = 80/131 (61.07%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L  E++L P         ILFSDILT    M +    + G+GPV   P+ + A+++ +   DPE+ + YV  A+ ++R E++ E  ++GF G+P+TL +Y +EGGSSK + + K + + +P++LH LL K
Sbjct:   54 ELACEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFLPGEGPVFDHPVRSAADIEHLPVPDPEDELRYVTDAVRLIRRELDGEVPLIGFAGSPWTLATYMIEGGSSKDYRRCKAMLYDEPELLHRLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEWM (Uroporphyrinogen decarboxylase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++A+ +P  LH LL K
Sbjct:   52 NQDLACEVTLQPLRRYDLDAAILFSDILTIPDAMGLGLYFETGEGPRFQRPTDTIDAIKKLSIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHMLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHESW (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain W3-18-1) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDK 184          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_VIBF18.693e-2140.60Uroporphyrinogen decarboxylase OS=Vibrio fischeri ... [more]
DCUP_SHEFN8.693e-2140.60Uroporphyrinogen decarboxylase OS=Shewanella frigi... [more]
DCUP_PHOPR8.693e-2140.60Uroporphyrinogen decarboxylase OS=Photobacterium p... [more]
DCUP_ALISL8.693e-2140.60Uroporphyrinogen decarboxylase OS=Aliivibrio salmo... [more]
DCUP_AERS48.693e-2140.60Uroporphyrinogen decarboxylase OS=Aeromonas salmon... [more]
DCUP_ESCF31.135e-2039.85Uroporphyrinogen decarboxylase OS=Escherichia ferg... [more]
DCUP_CITK81.135e-2039.85Uroporphyrinogen decarboxylase OS=Citrobacter kose... [more]
DCUP_ALHEH1.135e-2036.64Uroporphyrinogen decarboxylase OS=Alkalilimnicola ... [more]
DCUP_SHEWM1.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella woody... [more]
DCUP_SHESW1.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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