EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHESH (Uroporphyrinogen decarboxylase OS=Shewanella sediminis (strain HAW-EB3) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++A+ +P  LH LL K
Sbjct:   52 NQDLACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFQRPTDTIDSIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHLLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEPW (Uroporphyrinogen decarboxylase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++A+ +P  LH LL K
Sbjct:   52 NQDLACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTIDSIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHMLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEPC (Uroporphyrinogen decarboxylase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEPA (Uroporphyrinogen decarboxylase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++A+ +P  LH LL K
Sbjct:   52 NQDLACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDSIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHMLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEHH (Uroporphyrinogen decarboxylase OS=Shewanella halifaxensis (strain HAW-EB4) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++A+ +P  LH LL K
Sbjct:   52 NQDLACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTIDSIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHMLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEDO (Uroporphyrinogen decarboxylase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 53/133 (39.85%), Postives = 80/133 (60.15%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +     +G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NAELACEVTLQPLRRYKLDAAILFSDILTVPDAMGLGLYFEEGEGPRFERPTDTVDAIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEB9 (Uroporphyrinogen decarboxylase OS=Shewanella baltica (strain OS195) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHMLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEB8 (Uroporphyrinogen decarboxylase OS=Shewanella baltica (strain OS185) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHMLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEB5 (Uroporphyrinogen decarboxylase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHMLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHEB2 (Uroporphyrinogen decarboxylase OS=Shewanella baltica (strain OS223) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TL +Y VEGGSSK F KIK++A+++P  LH LL K
Sbjct:   52 NHELACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHMLLDK 184
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_SHESH1.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella sedim... [more]
DCUP_SHEPW1.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella piezo... [more]
DCUP_SHEPC1.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella putre... [more]
DCUP_SHEPA1.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella peale... [more]
DCUP_SHEHH1.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella halif... [more]
DCUP_SHEDO1.483e-2039.85Uroporphyrinogen decarboxylase OS=Shewanella denit... [more]
DCUP_SHEB91.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella balti... [more]
DCUP_SHEB81.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella balti... [more]
DCUP_SHEB51.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella balti... [more]
DCUP_SHEB21.483e-2040.60Uroporphyrinogen decarboxylase OS=Shewanella balti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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