EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SALNS (Uroporphyrinogen decarboxylase OS=Salmonella newport (strain SL254) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LH LL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SALAR (Uroporphyrinogen decarboxylase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LH LL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMELGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PASMU (Uroporphyrinogen decarboxylase OS=Pasteurella multocida GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 75/133 (56.39%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    PI T   V  +   DPE  + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++ ++ P++LH LL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLSFGVGEGPKFAHPIETQRAVQNLPIPDPEGELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYADPQLLHQLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_MYXXD (Uroporphyrinogen decarboxylase OS=Myxococcus xanthus (strain DK 1622) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/131 (41.22%), Postives = 78/131 (59.54%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            DL  E+++ P   L     I+FSDIL P+  M I  ++   KGP   DP+ + A++D++   DP E   +V +A+   R+ +N+   V+GF GAPFTL +Y VEGG SK +  IKRL F QP++ H L  K
Sbjct:   49 DLAAEVTVQPVTRLGVDAAIIFSDILIPVEAMGITLEL-GDKGPHFPDPVRSAADIDKLGVPDPVEGTGFVAEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLMFEQPELAHRLFGK 178          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSW (Uroporphyrinogen decarboxylase OS=Geobacillus sp. (strain WCH70) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 52/129 (40.31%), Postives = 80/129 (62.02%), Query Frame = 3
Query:  108 VVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            V  + +  +HV      IL+ DI++PL  + +  +I  G GPVI +PI + A+V+++ E  PEE VPYV + + ++  E  N   ++GF GAPFTL SY +EGG SK++NK K   +++PK   AL+ K
Sbjct:   58 VTRLPVEQYHV---DAAILYKDIMSPLPAIGVDVEIKAGVGPVIANPIRSLADVEKLGEIHPEEDVPYVLETIKLLTTEQLN-VPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAWFALMDK 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ERWCT (Uroporphyrinogen decarboxylase OS=Erwinia carotovora subsp. atroseptica GN=hemE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.483e-20
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    PI + A+V ++   DPE+ + YV  A+  +R+ +  E  ++GF G+P+TL +Y VEGGSSK F  IK++ F++PK LH LL K
Sbjct:   52 NAELACEVTLQPLRRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVKLPVPDPEQELGYVMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SODGM (Uroporphyrinogen decarboxylase OS=Sodalis glossinidius (strain morsitans) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.937e-20
Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +     +G+GP    PI    +V+Q+   DPE+ + YV  A+  +R+ +     ++GF G+P+TL +Y VEGGSSK F KIK++ +++P+ LH LL K
Sbjct:   52 NADLACEVTLQPLRRFPLDATILFSDILTVPDAMGLGLWFEQGEGPRFARPIQHRRDVEQLPIPDPEQELGYVMNAVRAIRQRLQGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMLYAEPETLHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SALTI (Uroporphyrinogen decarboxylase OS=Salmonella typhi GN=hemE PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.937e-20
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LH LL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SALPK (Uroporphyrinogen decarboxylase OS=Salmonella paratyphi A (strain AKU_12601) GN=hemE PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.937e-20
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LH LL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SALPA (Uroporphyrinogen decarboxylase OS=Salmonella paratyphi A GN=hemE PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.937e-20
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LH LL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDK 184          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_SALNS1.483e-2039.85Uroporphyrinogen decarboxylase OS=Salmonella newpo... [more]
DCUP_SALAR1.483e-2039.85Uroporphyrinogen decarboxylase OS=Salmonella arizo... [more]
DCUP_PASMU1.483e-2040.60Uroporphyrinogen decarboxylase OS=Pasteurella mult... [more]
DCUP_MYXXD1.483e-2041.22Uroporphyrinogen decarboxylase OS=Myxococcus xanth... [more]
DCUP_GEOSW1.483e-2040.31Uroporphyrinogen decarboxylase OS=Geobacillus sp. ... [more]
DCUP_ERWCT1.483e-2040.60Uroporphyrinogen decarboxylase OS=Erwinia carotovo... [more]
DCUP_SODGM1.937e-2039.85Uroporphyrinogen decarboxylase OS=Sodalis glossini... [more]
DCUP_SALTI1.937e-2039.85Uroporphyrinogen decarboxylase OS=Salmonella typhi... [more]
DCUP_SALPK1.937e-2039.85Uroporphyrinogen decarboxylase OS=Salmonella parat... [more]
DCUP_SALPA1.937e-2039.85Uroporphyrinogen decarboxylase OS=Salmonella parat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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