EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROMA (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus GN=hemE PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.201e-35
Identity = 77/141 (54.61%), Postives = 98/141 (69.50%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  EIS+ P+    P GVILFSDILTPL GM I FDI++ KGP+I DPI T  +V  +R  +P+ S+P+VG+ L  +RE V NE+AVLGF GAP+TL +Y VEG SSK+++ IK +AF QP +LH LL  F
Sbjct:   44 SFRERSENPDLSYEISMQPFREFKPDGVILFSDILTPLPGMGIDFDIVESKGPLINDPIRTLEQVKTLRPLEPQVSLPFVGEVLGRLRESVKNEAAVLGFVGAPWTLAAYVVEGKSSKNYSVIKAMAFQQPDLLHKLLNHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROM4 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9211) GN=hemE PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 8.099e-35
Identity = 74/141 (52.48%), Postives = 97/141 (68.79%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  EIS+ P+    P GVILFSDILTPL GM I FDI++ KGP+I DPI  ++++  +R   P ES P+VG+ L  +R+ V NE+AVLGF GAP+TL +Y VEG SSK++  IK +AF +P++LH LL  F
Sbjct:   44 SFRERSENPDLSYEISMQPFRAFKPDGVILFSDILTPLPGMGIDFDIVESKGPLIKDPIRNESQIKTLRALSPSESCPFVGEVLKRLRDSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPELLHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROM2 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemE PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.381e-34
Identity = 72/141 (51.06%), Postives = 101/141 (71.63%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N +L  EIS+ P+H   P GVILFSDILTPL GM I F+II+ KGP+I DPI    +++ ++E +P ES+ +VG+ L+ ++++VNNE+ VLGF GAP+TL +Y VEG SSK+++ IK +AF +P +LH LL  F
Sbjct:   44 SFRERSENPELSYEISMQPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNLNQIENLKELNPSESLSFVGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPGLLHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ANASP (Uroporphyrinogen decarboxylase OS=Anabaena sp. (strain PCC 7120) GN=hemE PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.078e-34
Identity = 67/131 (51.15%), Postives = 93/131 (70.99%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            ++ +E+SL PW    P GVILFSDI+TPL G+ I  DI +GKGP+I  PI T A+++Q+R  +PE ++P++   L  +R+EV N+S VLGF GAP+TL +Y VEG  SK ++ IK +AFS P +LH LL K
Sbjct:   55 EVAIEVSLQPWKAFQPDGVILFSDIVTPLPGLGIEMDIAEGKGPIIHAPIRTQAQIEQLRPLEPEAALPFIKTILQALRQEVGNQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILHQLLSK 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_GLOVI (Uroporphyrinogen decarboxylase OS=Gloeobacter violaceus GN=hemE PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 4.019e-34
Identity = 73/134 (54.48%), Postives = 93/134 (69.40%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            N DL VEISL P+    P GVI+FSDILTP  GM IPF++++ +GPVI  PI T  +V+ VR  DPE S+ +V   L  +R EV   + VLGF GAP+TL +Y VEG SSK +  IK++AFS+P +LHALL KF
Sbjct:   48 NPDLAVEISLQPFRAFRPDGVIMFSDILTPFDGMGIPFELVESRGPVIDPPIRTREQVEAVRPLDPEASLAFVRTILQTLRREVGEAATVLGFVGAPWTLAAYAVEGKSSKDYALIKQMAFSEPDLLHALLTKF 181          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ANAVT (Uroporphyrinogen decarboxylase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hemE PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.249e-34
Identity = 67/131 (51.15%), Postives = 94/131 (71.76%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            ++ +E+SL PW    P GVILFSDI+TPL G+ I  DI +GKGP+I  PI T A+++Q+R  +PE ++P++   L  +R+EV ++S VLGF GAP+TL +Y VEG  SK ++ IK LAFS+P +LH LL K
Sbjct:   55 EVAIEVSLQPWKAFQPDGVILFSDIVTPLPGLGIEMDIAEGKGPIIHAPIRTQAQIEQLRPLEPEAALPFIKTILQALRQEVGHQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNLAFSEPAILHQLLTK 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNJA (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain JA-3-3Ab) GN=hemE PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.856e-34
Identity = 68/131 (51.91%), Postives = 96/131 (73.28%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L +EISL P+    P GVI+FSDILTPL GM IPF++++ +GP+I  PI + A+V+Q+R  +PEES+P++   L+ +R EV  ++ +LGF G+P+TL  Y VEG SSK +  IK LAF+QP+VLH LL K
Sbjct:   65 ELAIEISLQPFRAFAPDGVIMFSDILTPLEGMGIPFELVEQQGPIIDPPIRSQAQVEQIRLLEPEESLPFIKTILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFTQPQVLHQLLSK 195          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNS9 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9902) GN=hemE PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.527e-33
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  EIS+ P+    P GVILFSDILTPL GM I FDII+ KGP I DPI +  +V  +R  +P ES+P+VG+ L  +R+ V N++AVLGF GAP+TL +Y VEG SSK++  IK +AF +P++LH LL  F
Sbjct:   44 SFRERSENPDLSYEISMQPFEAFQPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMEQVKALRPLNPAESMPFVGEVLGRLRKTVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPELLHTLLNHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROMT (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain NATL2A) GN=hemE PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.605e-33
Identity = 74/141 (52.48%), Postives = 97/141 (68.79%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  EIS+ P+    P GVILFSDILTPL GM I FDI++ KGP+I DPI +  +V  ++   PEES+ +VG+ L  +RE V N++AVLGF GAP+TL +Y VEG SSK++  IK +AF +P++LH LL  F
Sbjct:   44 SFRERSENPDLSYEISMQPFKAFQPDGVILFSDILTPLPGMGINFDIVESKGPLINDPIRSLKQVKDLKPLQPEESMSFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPELLHQLLNHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROM1 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain NATL1A) GN=hemE PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.403e-33
Identity = 74/141 (52.48%), Postives = 97/141 (68.79%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  EIS+ P+    P GVILFSDILTPL GM I FDI++ KGP+I DPI +  +V  ++   PEES+ +VG+ L  +RE V N++AVLGF GAP+TL +Y VEG SSK++  IK +AF +P++LH LL  F
Sbjct:   44 SFRERSENPDLSYEISMQPFTAFQPDGVILFSDILTPLPGMGINFDIVESKGPLINDPIRSLKQVKDLKPLQPEESMSFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPELLHQLLNHF 184          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_PROMA6.201e-3554.61Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_PROM48.099e-3552.48Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_PROM21.381e-3451.06Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_ANASP3.078e-3451.15Uroporphyrinogen decarboxylase OS=Anabaena sp. (st... [more]
DCUP_GLOVI4.019e-3454.48Uroporphyrinogen decarboxylase OS=Gloeobacter viol... [more]
DCUP_ANAVT5.249e-3451.15Uroporphyrinogen decarboxylase OS=Anabaena variabi... [more]
DCUP_SYNJA6.856e-3451.91Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_SYNS91.527e-3353.19Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_PROMT2.605e-3352.48Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_PROM13.403e-3352.48Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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