EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNJB (Uroporphyrinogen decarboxylase OS=Synechococcus sp. GN=hemE PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.444e-33
Identity = 67/131 (51.15%), Postives = 95/131 (72.52%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L VEISL P+    P GVILFSDILTPL GM IPF++++ +GP+I  PI + A+++++R  +PEES+P++   L+ +R EV  ++ +LGF G+P+TL  Y VEG SSK +  IK LAF+QP +LH LL K
Sbjct:   49 ELAVEISLQPFRAFAPDGVILFSDILTPLEGMGIPFELVEHQGPIIDPPIRSQAQIERIRLLEPEESLPFIKTILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFAQPPLLHQLLSK 179          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SYNR3 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain RCC307) GN=hemE PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.580e-33
Identity = 74/141 (52.48%), Postives = 95/141 (67.38%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  EIS+ P++   P GVILFSDILTPL GM I FDII+ KGP I DPI   A+V+ +R   P E++P+VG+ L  +R  V N + VLGF GAP+TL +Y VEG SSK++  IK +AF +P++LH LL  F
Sbjct:   44 SFRERSENPDLSYEISMQPYNAFQPDGVILFSDILTPLPGMGIDFDIIESKGPQINDPIRNLAQVEALRPLVPAETMPFVGEVLGRLRSSVGNNATVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPEMLHKLLNHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROMP (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=hemE PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.900e-33
Identity = 71/141 (50.35%), Postives = 99/141 (70.21%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N +L  EIS+ P+    P GVILFSDILTPL GM I F+II+ KGP+I DPI    +V++++E  P ES+ +VG+ L+ ++++V NE+ VLGF GAP+TL +Y VEG SSK+++ IK +AF +P +LH LL  F
Sbjct:   44 SFRERSENPELSYEISMQPFLAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNIRQVEKLKELIPNESLSFVGEVLSSLKKDVKNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_NOSP7 (Uroporphyrinogen decarboxylase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemE PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.689e-32
Identity = 64/131 (48.85%), Postives = 90/131 (68.70%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            D+ +E+SL PW    P GVILFSDI+TPL G+ I  DI +GKGP+I  P+ T  ++D++   +PE ++P++   L  +R EV ++S VLGF GAP+TL +Y VEG  SK ++ IK +AFS P +LH LL K
Sbjct:   55 DVAIEVSLQPWKAFQPDGVILFSDIVTPLPGLGIDMDIAEGKGPIIHSPLRTQEQIDRLHPLEPEAALPFIKTILQALRSEVGDKSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILHQLLTK 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROM5 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemE PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.206e-32
Identity = 69/141 (48.94%), Postives = 99/141 (70.21%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N +L  +IS+ P+    P GVILFSDILTPL GM I F+II+ KGP+I +PI    +++ ++E  P ES+ +VG+ L+ ++++VNNE+ VLGF GAP+TL +Y VEG SSK+++ IK +AF +P +LH LL  F
Sbjct:   44 SFRERSENPELSYQISMQPFKAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIENPIKNIHQIENLKELVPSESLSFVGEVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHKLLDHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROMM (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemE PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.880e-32
Identity = 70/141 (49.65%), Postives = 97/141 (68.79%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  +IS+ P+    P GVILFSDILTPL GM I FDI++ KGP+I  PI + ++++ ++  +P  ++P+VG+ L  +RE V N++AVLGF GAP+TL +Y VEG SSK++  IK +AF QP +LH LL  F
Sbjct:   44 SFRERSENPDLSYQISMQPFEAFQPDGVILFSDILTPLPGMGIDFDIVESKGPLIQKPIRSLSQIEALQPLEPNATMPFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQPDLLHRLLNHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PROM3 (Uroporphyrinogen decarboxylase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemE PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.762e-32
Identity = 70/141 (49.65%), Postives = 96/141 (68.09%), Query Frame = 3
Query:   75 SLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKF 497
            S R    N DL  +IS+ P+    P GVILFSDILTPL GM I FDI++ KGP+I  PI + ++++ ++  +P  ++P+VG+ L  +RE V N +AVLGF GAP+TL +Y VEG SSK++  IK +AF QP +LH LL  F
Sbjct:   44 SFRERSENPDLSYQISMQPFEAFQPDGVILFSDILTPLPGMGIDFDIVESKGPLIQKPIRSLSQIEALQPLEPNATMPFVGEVLGRLRESVGNRAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQPDLLHRLLNHF 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_THEEB (Uroporphyrinogen decarboxylase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemE PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.266e-31
Identity = 64/134 (47.76%), Postives = 90/134 (67.16%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNT 503
            +L +EISL P+    P GVILFSDILTPL G+ IPFDI++ KGP+I  PI T  +V  +   +PE + P++   L  +R+EV + +AVLGF GAP+TL +Y +EG SSK + +IK +A+ +P +LH  L    T
Sbjct:   51 ELAIEISLQPFRAFAPDGVILFSDILTPLPGIGIPFDIVESKGPIIDPPIRTLEQVQHLHPLEPEAACPFIRPILATLRQEVGDRAAVLGFAGAPWTLAAYAIEGKSSKDYIQIKTMAYREPDLLHKFLNHLAT 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP1_ARATH (Uroporphyrinogen decarboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=At3g14930 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.282e-29
Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 3
Query:   33 RFGSGYPGSTHTSASLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            R+ + Y        S R    N DL+VEISL PW    P GVI+FSDILTPL    +PFDI + KGPVI  PI T+ ++ ++   D  E + +VG +L I+R EV   +AVLGF GAP+T+ +Y VEGG+++ +  IK +  + P VL ALL
Sbjct:   84 RYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHPID-FEKLQFVGDSLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRALL 234          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP1_ORYSJ (Uroporphyrinogen decarboxylase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0622300 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.622e-28
Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = 3
Query:   33 RFGSGYPGSTHTSASLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP--EESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            R+ + Y        S R      +L+VEI+L PW    P GVILFSDILTPL  + +PFDI   KGPVI  P+ ++   +QVRE  P   E + +VG++L I+R E++ ++A+LGF GAP+T+ +Y VEGG +  +  IK +  + P VL  LL
Sbjct:   71 RYMAEYQALAKRHPSFRERSETTELIVEITLQPWRAFAPDGVILFSDILTPLPAIGVPFDISDSKGPVIQSPVRSE---EQVRELTPIDFEKLRFVGESLKILRTEIDGQAALLGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPNVLRGLL 221          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_SYNJB4.444e-3351.15Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_SYNR37.580e-3352.48Uroporphyrinogen decarboxylase OS=Synechococcus sp... [more]
DCUP_PROMP9.900e-3350.35Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_NOSP71.689e-3248.85Uroporphyrinogen decarboxylase OS=Nostoc punctifor... [more]
DCUP_PROM52.206e-3248.94Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_PROMM2.880e-3249.65Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_PROM33.762e-3249.65Uroporphyrinogen decarboxylase OS=Prochlorococcus ... [more]
DCUP_THEEB9.266e-3147.76Uroporphyrinogen decarboxylase OS=Thermosynechococ... [more]
DCUP1_ARATH2.282e-2945.39Uroporphyrinogen decarboxylase 1, chloroplastic OS... [more]
DCUP1_ORYSJ5.622e-2842.86Uroporphyrinogen decarboxylase 1, chloroplastic OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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