EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PSEFS (Uroporphyrinogen decarboxylase OS=Pseudomonas fluorescens (strain SBW25) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 3
Query:  159 ILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            ILFSDILT    M        G+GP     ++T A+++ +   DP + + YV  A++ +R E+N    ++GF G+P+TL +Y VEGGSSK F K K + +  P+ +H LL K
Sbjct:   74 ILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGYVMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAMHLLLDK 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PELLD (Uroporphyrinogen decarboxylase OS=Pelodictyon luteolum (strain DSM 273) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 41/135 (30.37%), Postives = 82/135 (60.74%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            +L +E+++ P  ++     I+FSDIL     M +  +II+ KG  +  PI + A+++++   + ++ + YV  A+ + ++ ++N   ++GF GA +TL +Y VEGG SK++   K++ + +PK+ H LL K + +
Sbjct:   51 ELAMEVTIQPVELMGVDAAIIFSDILVVNEAMGMDVEIIETKGIKLTPPIRSQADINRLIIPEVQDKLGYVLDAIRLTKKVLDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPKMAHMLLSKISAV 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_NEIMF (Uroporphyrinogen decarboxylase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 46/131 (35.11%), Postives = 74/131 (56.49%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N +L  E+++ P         ILFSDILT    M +     +G+GP     +  +A++ ++   D E+ + YV  A+T +R+ ++    ++GF G+PFTL  Y VEGG SK F  IK + +S+P +LH +L
Sbjct:   52 NTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRAMQHEADIAKLHVPDMEK-LQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKIL 181          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_MYCLE (Uroporphyrinogen decarboxylase OS=Mycobacterium leprae GN=hemE PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 46/135 (34.07%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            ++  EI+L P         ILFSDI+ PL    I  DI+   GPVI DP+ T  ++  ++  +P+   P + +A++++   +  +  ++GF GAPFTL SY VEGG S++  + K +  ++P   H L+ K   L
Sbjct:   56 EVACEITLQPLRRYDVDAAILFSDIVVPLCAAGIDLDIVPDVGPVIGDPVRTATDIHAMKPLEPQAIQP-IFQAISLLVAAL-GDVPLIGFAGAPFTLASYLVEGGPSRNHPRTKAMMLAEPASWHTLMDKLTDL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_MYCLB (Uroporphyrinogen decarboxylase OS=Mycobacterium leprae (strain Br4923) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 46/135 (34.07%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            ++  EI+L P         ILFSDI+ PL    I  DI+   GPVI DP+ T  ++  ++  +P+   P + +A++++   +  +  ++GF GAPFTL SY VEGG S++  + K +  ++P   H L+ K   L
Sbjct:   56 EVACEITLQPLRRYDVDAAILFSDIVVPLCAAGIDLDIVPDVGPVIGDPVRTATDIHAMKPLEPQAIQP-IFQAISLLVAAL-GDVPLIGFAGAPFTLASYLVEGGPSRNHPRTKAMMLAEPASWHTLMDKLTDL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_LEGPC (Uroporphyrinogen decarboxylase OS=Legionella pneumophila (strain Corby) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +     +G+GP   +P+     +  ++     ES+ YV  A  ++R+E+  E  ++GF G+P+TL  Y VEGGSS+ F +I  L +++ +  H LL K
Sbjct:   52 NPELACEVTLQPLRRYALDAAILFSDILTIPDAMGLGLYFAEGEGPCFTNPLQDTKAIHTLKIPSIPESLSYVFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLNK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_LEGPA (Uroporphyrinogen decarboxylase OS=Legionella pneumophila (strain Paris) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +     +G+GP   +P+     +  ++     ES+ YV  A  ++R+E+  E  ++GF G+P+TL  Y VEGGSS+ F +I  L +++ +  H LL K
Sbjct:   52 NPELACEVTLQPLRRYALDAAILFSDILTIPDAMGLGLYFAEGEGPCFTNPLQDTKAIHALKIPSIPESLSYVFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLNK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURVG (Uroporphyrinogen decarboxylase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hemE PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 8.420e-16
Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N D   E++L P         ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D +E++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K +A+S+P ++H +L
Sbjct:   53 NPDYATEVTLQPLDRFPLDAAILFSDILTIPDAMGLGLDFQAGEGPKFAHPVRTEADVAKLAVPDIDETLGYVTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRIL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PSEF5 (Uroporphyrinogen decarboxylase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.100e-15
Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 3
Query:  159 ILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            ILFSDILT    M        G+GP     ++T A+++ +   DP + + YV  A++ +R E+N    ++GF G+P+TL +Y VEGGSSK F K K + +  P+ +H LL K
Sbjct:   74 ILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGYVMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLLLDK 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_NEIMA (Uroporphyrinogen decarboxylase OS=Neisseria meningitidis serogroup A GN=hemE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.100e-15
Identity = 46/131 (35.11%), Postives = 74/131 (56.49%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N +L  E+++ P         ILFSDILT    M +     +G+GP     +  + ++ ++   D E+ + YV  A+T +R+ ++    ++GF G+PFTL  Y VEGGSSK F  IK + +S+P +LH +L
Sbjct:   52 NTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVPDMEK-LQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKIL 181          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_PSEFS8.420e-1639.29Uroporphyrinogen decarboxylase OS=Pseudomonas fluo... [more]
DCUP_PELLD8.420e-1630.37Uroporphyrinogen decarboxylase OS=Pelodictyon lute... [more]
DCUP_NEIMF8.420e-1635.11Uroporphyrinogen decarboxylase OS=Neisseria mening... [more]
DCUP_MYCLE8.420e-1634.07Uroporphyrinogen decarboxylase OS=Mycobacterium le... [more]
DCUP_MYCLB8.420e-1634.07Uroporphyrinogen decarboxylase OS=Mycobacterium le... [more]
DCUP_LEGPC8.420e-1634.59Uroporphyrinogen decarboxylase OS=Legionella pneum... [more]
DCUP_LEGPA8.420e-1634.59Uroporphyrinogen decarboxylase OS=Legionella pneum... [more]
DCUP_BURVG8.420e-1634.56Uroporphyrinogen decarboxylase OS=Burkholderia vie... [more]
DCUP_PSEF51.100e-1539.29Uroporphyrinogen decarboxylase OS=Pseudomonas fluo... [more]
DCUP_NEIMA1.100e-1535.11Uroporphyrinogen decarboxylase OS=Neisseria mening... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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