EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_NEIM0 (Uroporphyrinogen decarboxylase OS=Neisseria meningitidis serogroup C (strain 053442) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.100e-15
Identity = 46/131 (35.11%), Postives = 74/131 (56.49%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N +L  E+++ P         ILFSDILT    M +     +G+GP     +  + ++ ++   D E+ + YV  A+T +R+ ++    ++GF G+PFTL  Y VEGGSSK F  IK + +S+P +LH +L
Sbjct:   52 NTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVPDMEK-LQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKIL 181          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ANADE (Uroporphyrinogen decarboxylase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=hemE PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.100e-15
Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGK------GPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L+ ++++ P         ILFSDIL  L  M +     KG+      GP I +P+ T A+VD +R   P++ +PYV   +  +R  + +   ++GF G PFT+ SY VEGG S+ F ++K + +++P   HAL +K
Sbjct:   49 ELIAQVTVAPIDEFGFDAAILFSDILVHLPAMGLDLTFEKGEKGKGDGGPKIGNPVRTRADVDALRVPVPKKDLPYVLDGVRAIRTALADRVPLIGFVGGPFTVASYAVEGG-SQGFTRLKTMLYAEPATAHALFEK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_MYCS2 (Uroporphyrinogen decarboxylase OS=Mycobacterium smegmatis GN=hemE PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.436e-15
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            + +LV EI++ P         ILFSDI+ PL    I  DI+   GPVI +PI T  +V  +   +  +  P V +A+ ++  E+  +  ++GF GAPFTL SY VEGG S+H  + K +   +    HAL+     L
Sbjct:   54 DAELVCEITMQPVRRHKVDAAILFSDIVVPLKAAGIGLDIVPDVGPVIDNPIRTLGDVQAMPALESPQVAP-VAEAVRLLTAELG-DVPLIGFAGAPFTLASYLVEGGPSRHHERTKAMMLGESSTWHALMTALTDL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_LEGPL (Uroporphyrinogen decarboxylase OS=Legionella pneumophila (strain Lens) GN=hemE PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.436e-15
Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +     +G+GP   +P+     +  ++     ES+ YV  A  ++R+E+  E  ++GF G+P+TL  Y VEGGSS+ F +I  L +++ +  H LL K
Sbjct:   52 NPELACEVTLQPLRRYALDAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLKIPSIPESLSYVFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLSK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_LEGPH (Uroporphyrinogen decarboxylase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hemE PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.436e-15
Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +     +G+GP   +P+     +  ++     ES+ YV  A  ++R+E+  E  ++GF G+P+TL  Y VEGGSS+ F +I  L +++ +  H LL K
Sbjct:   52 NPELACEVTLQPLRRYALDAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLKIPSIPESLSYVFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLNK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURCJ (Uroporphyrinogen decarboxylase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hemE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.436e-15
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N D   E++L P         ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D E ++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K +A+S+P ++H +L
Sbjct:   53 NPDYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLGYVTGAVREIRRALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRIL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_AZOSB (Uroporphyrinogen decarboxylase OS=Azoarcus sp. (strain BH72) GN=hemE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  105 LVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            L  E++L P         ILFSDILT    M +     +G+GP    P+  + E+  +   DP   + YV  A++ +R  ++    ++GF G+P+TL  Y VEGGSS  + +IK +A+S+P +LH +L
Sbjct:   55 LACEVTLQPLARYDLDAAILFSDILTVPDAMGLGLYFAEGEGPRFERPLRDEWEIRNLSVPDPHAELQYVMDAVSEIRRALDGSVPLIGFSGSPWTLACYMVEGGSSDDYRRIKTMAYSRPDLLHHIL 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_MYCVP (Uroporphyrinogen decarboxylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=hemE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.450e-15
Identity = 52/134 (38.81%), Postives = 73/134 (54.48%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGV---ILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            + DL+ EI+L P      HGV   ILFSDI+ PL    I  DI+   GPVI  P+ T  +V  +R  +P    P V  A+  +  E+  +  ++GF GAPFTL SY VEGG S++  + K +   +    HAL+
Sbjct:   54 DADLITEITLQPVR---RHGVDAAILFSDIVVPLRAAGIDLDIVPDVGPVIAQPVRTADDVAAIRPLEPSRVDP-VATAIGRLVGELG-DVPLIGFAGAPFTLASYLVEGGPSRNHERTKAMMLGETATWHALM 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_HELHP (Uroporphyrinogen decarboxylase OS=Helicobacter hepaticus GN=hemE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.450e-15
Identity = 49/153 (32.03%), Postives = 84/153 (54.90%), Query Frame = 3
Query:   33 RFGSGYPGSTHTSASLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            R+ S Y  +   + S  +   NV+L  E++L P  +L     ILFSDIL     M +P + + G+GP     I+  ++V  ++E    + + YV   L+ +R ++  E A++GF G+P+TL +Y +EG  SK + K K + + +P +L  LL+
Sbjct:   25 RYLSEYKQTRTKAGSFLSLCKNVELATEVTLQPVEILDVDAAILFSDILVVPLEMGLPLEFLAGEGPKFNRTISNVSDVVNLQE-GAHKRLTYVYDTLSSIRSKLPKEKALIGFCGSPWTLATYMIEGQGSKTYAKSKAMLYKEPYILKTLLE 176          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_COXB2 (Uroporphyrinogen decarboxylase OS=Coxiella burnetii (strain CbuG_Q212) GN=hemE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.450e-15
Identity = 46/135 (34.07%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            +L  E +L P         I+FSDILT    M +   I    GPVI +P+ +  +V++++    EE++ Y+  A+ +  + +++   ++GF G+P+TL  Y  EG SSK F   + + + QP V H LLQK  TL
Sbjct:   54 ELACEATLQPLRRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPPVEEALSYLFDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTLLQKLTTL 188          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_NEIM01.100e-1535.11Uroporphyrinogen decarboxylase OS=Neisseria mening... [more]
DCUP_ANADE1.100e-1534.31Uroporphyrinogen decarboxylase OS=Anaeromyxobacter... [more]
DCUP_MYCS21.436e-1535.77Uroporphyrinogen decarboxylase OS=Mycobacterium sm... [more]
DCUP_LEGPL1.436e-1534.59Uroporphyrinogen decarboxylase OS=Legionella pneum... [more]
DCUP_LEGPH1.436e-1534.59Uroporphyrinogen decarboxylase OS=Legionella pneum... [more]
DCUP_BURCJ1.436e-1534.56Uroporphyrinogen decarboxylase OS=Burkholderia cep... [more]
DCUP_AZOSB1.876e-1535.16Uroporphyrinogen decarboxylase OS=Azoarcus sp. (st... [more]
DCUP_MYCVP2.450e-1538.81Uroporphyrinogen decarboxylase OS=Mycobacterium va... [more]
DCUP_HELHP2.450e-1532.03Uroporphyrinogen decarboxylase OS=Helicobacter hep... [more]
DCUP_COXB22.450e-1534.07Uroporphyrinogen decarboxylase OS=Coxiella burneti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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