EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_AZOSE (Uroporphyrinogen decarboxylase OS=Azoarcus sp. (strain EbN1) GN=hemE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.309e-15
Identity = 44/129 (34.11%), Postives = 70/129 (54.26%), Query Frame = 3
Query:  105 LVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            L  E++L P         ILFSDILT    M +     +G+GP    P+  + E+  +   DP   + YV  A+  +R  +     ++GF G+P+TL  Y VEGGSS  + +IK +A+++P +LH +L+
Sbjct:   55 LACEVTLQPLARYDLDAAILFSDILTVPDAMGLGLYFAEGEGPRFERPLRDEWEIRNLVAPDPHAELQYVMDAVAEIRRALGGSVPLIGFSGSPWTLACYMVEGGSSDDYRRIKTMAYTRPDLLHHVLR 183          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_JANMA (Uroporphyrinogen decarboxylase OS=Janthinobacterium sp. (strain Marseille) GN=hemE PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.216e-14
Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPE-ESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            N D   E++L P         ILFSDILT    M +    I+G+GP    P+  +  V  ++   PE  S+ YV  A+T +R E+     ++GF G+P+TL  Y VEGG S  F  +K + +++P ++H +LQ
Sbjct:   56 NPDFATEVTLQPLDRYKLDAAILFSDILTVPDAMGLGLYFIEGEGPKFERPLRDEKAVQALKV--PELGSLQYVFDAVTQIRTELKGRVPLIGFTGSPWTLACYMVEGGGSDDFRTVKAMLYNRPDLMHHILQ 186          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_NEIG1 (Uroporphyrinogen decarboxylase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=hemE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.588e-14
Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N  L  E+++ P         ILFSDILT    M +     +G+GP     +  ++++ ++   D E+ + YV  A+T +R+ ++    ++GF G+PFTL  Y VEGG SK F  IK + +S+P +L+ +L
Sbjct:   52 NTGLATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHESDIAKLHVPDMEK-LQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLYKIL 181          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_DECAR (Uroporphyrinogen decarboxylase OS=Dechloromonas aromatica (strain RCB) GN=hemE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.074e-14
Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 3
Query:  105 LVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            +  E++L P         ILFSDILT    M +     +G+GP    P+  +  ++ +   DP E + YV  A++ +R  ++N   ++GF G+P+TL  Y VEG  S  F  IK + +++P +LH +L
Sbjct:   55 MACEVTLQPLARYDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERPLREEWAINNLTVTDPYEHLGYVMDAVSEIRRALDNSVPLIGFSGSPYTLACYMVEGEGSSDFRNIKAMLYNRPDLLHRIL 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_NITMU (Uroporphyrinogen decarboxylase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=hemE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N D   E+++ P         ILFSDILT    M +     +G+GP    P+  + E+  +   DP   + YV  A++ +R+ ++N   ++GF G+PFTL  Y VEG     F +IK + + +P +LH +L
Sbjct:   52 NPDFATEVTMQPLARFPLDAAILFSDILTIPDAMGLGLYFAEGEGPRFERPLREEWEIRALTVPDPAVHLRYVMDAVSQIRKTLDNRVPLIGFSGSPFTLACYMVEGAGGTDFRQIKTMLYRRPDLLHHIL 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_MYCGI (Uroporphyrinogen decarboxylase OS=Mycobacterium gilvum (strain PYR-GCK) GN=hemE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 52/134 (38.81%), Postives = 73/134 (54.48%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGV---ILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            + DL+ EI+L P      HGV   ILFSDI+ PL    I  DI+   GPVI  PI T A+V  V     E   P V  A+  +   +  + A++GF GAPFTL SY +EGG S++  + K +   + +  +AL+
Sbjct:   54 DADLITEITLQPVR---RHGVDAAILFSDIVVPLRAAGIDLDIVPDVGPVIAHPIRTAADVATVSPLRRETVAP-VATAIGQLTAALG-DVALIGFAGAPFTLASYLIEGGPSRNHERTKAMMLGETETWNALM 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURTA (Uroporphyrinogen decarboxylase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=hemE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            D   E++L P         ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K +A+++P ++H +L
Sbjct:   55 DYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRIL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURPS (Uroporphyrinogen decarboxylase OS=Burkholderia pseudomallei GN=hemE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            D   E++L P         ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K +A+++P ++H +L
Sbjct:   55 DYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRIL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURP6 (Uroporphyrinogen decarboxylase OS=Burkholderia pseudomallei (strain 668) GN=hemE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            D   E++L P         ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K +A+++P ++H +L
Sbjct:   55 DYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRIL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURP0 (Uroporphyrinogen decarboxylase OS=Burkholderia pseudomallei (strain 1106a) GN=hemE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            D   E++L P         ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K +A+++P ++H +L
Sbjct:   55 DYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRIL 188          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_AZOSE9.309e-1534.11Uroporphyrinogen decarboxylase OS=Azoarcus sp. (st... [more]
DCUP_JANMA1.216e-1435.34Uroporphyrinogen decarboxylase OS=Janthinobacteriu... [more]
DCUP_NEIG11.588e-1433.59Uroporphyrinogen decarboxylase OS=Neisseria gonorr... [more]
DCUP_DECAR2.074e-1432.81Uroporphyrinogen decarboxylase OS=Dechloromonas ar... [more]
DCUP_NITMU2.709e-1432.82Uroporphyrinogen decarboxylase OS=Nitrosospira mul... [more]
DCUP_MYCGI2.709e-1438.81Uroporphyrinogen decarboxylase OS=Mycobacterium gi... [more]
DCUP_BURTA2.709e-1432.84Uroporphyrinogen decarboxylase OS=Burkholderia tha... [more]
DCUP_BURPS2.709e-1432.84Uroporphyrinogen decarboxylase OS=Burkholderia pse... [more]
DCUP_BURP62.709e-1432.84Uroporphyrinogen decarboxylase OS=Burkholderia pse... [more]
DCUP_BURP02.709e-1432.84Uroporphyrinogen decarboxylase OS=Burkholderia pse... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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