EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURMS (Uroporphyrinogen decarboxylase OS=Burkholderia mallei (strain SAVP1) GN=hemE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            D   E++L P         ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K +A+++P ++H +L
Sbjct:   55 DYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRIL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURM9 (Uroporphyrinogen decarboxylase OS=Burkholderia mallei (strain NCTC 10229) GN=hemE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            D   E++L P         ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K +A+++P ++H +L
Sbjct:   55 DYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRIL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURM7 (Uroporphyrinogen decarboxylase OS=Burkholderia mallei (strain NCTC 10247) GN=hemE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            D   E++L P         ILFSDILT    M +  D   G+GP    P+ T+A+V ++   D   ++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K +A+++P ++H +L
Sbjct:   55 DYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRIL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_DANRE (Uroporphyrinogen decarboxylase OS=Danio rerio GN=urod PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.538e-14
Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 3
Query:  114 EISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVR-EFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            E++L P         I+FSDIL     M +   +  GKGP   +P+    ++ +++ + D    + YV KA+T+ R ++  +  ++GF GAP+TL SY +EGG S   +K KR  +  P+  H LL +
Sbjct:   69 ELTLQPLRRFPFDAAIIFSDILVVPQAMGMEVQMCPGKGPTFPEPLKEPEDLQRLKTQVDVYSELDYVFKAITLTRHKIEGKVPLIGFTGAPWTLMSYMIEGGGSATHSKAKRWLYRYPEASHKLLSQ 196          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_CHRVO (Uroporphyrinogen decarboxylase OS=Chromobacterium violaceum GN=hemE PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.034e-14
Identity = 43/130 (33.08%), Postives = 70/130 (53.85%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            D   E++L P         ILFSDILT    M +     +G+GP    P+  +A +  +   D  + + YV  A+  +R+ ++    ++GF G+PFTL  Y VEGG S  F  +K + +S+P++LH +L+
Sbjct:   54 DYATEVTLQPLDRFPLDAAILFSDILTVPDAMGLGLYFAEGEGPKFQRPLRDEAAIRALAPADMGK-LQYVFDAVASIRKALDGRVPLIGFSGSPFTLACYMVEGGGSDDFRHVKAMLYSRPELLHHILE 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_CAMC5 (Uroporphyrinogen decarboxylase OS=Campylobacter curvus (strain 525.92) GN=hemE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.034e-14
Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 3
Query:  117 ISLPPWHVL*PHGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +++ P  +L     ILFSDIL  PL  GM + F+  KG+GPV   P+ T  ++  +      +++ YV   + + RE +  + A++GF GAP+T+ +Y +EGG +K +   K+L ++ P+ LH +L K
Sbjct:   53 VTIQPVEILGVDAAILFSDILVVPLEMGMGLRFE--KGEGPVFDRPVKTAGDLAVLDVDRAVKNLSYVYDTIALTRENLARDKALIGFCGAPWTIATYMIEGGGTKTYAVCKKLLYTNPEFLHQILAK 178          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_WIGBR (Uroporphyrinogen decarboxylase OS=Wigglesworthia glossinidia brevipalpis GN=hemE PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.881e-14
Identity = 42/131 (32.06%), Postives = 76/131 (58.02%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            DL  + +L P         I+FSDIL     M +  +  +  GP   +PI++ +++  +   DPE+++ YV  ++ I+ +E++ +  ++GF G+P+TL  Y +EG  +K F+KIK++ +   K LH LL+K
Sbjct:   54 DLSSKAALIPIKKFSLDAAIIFSDILILPYAMGMDVNFYENLGPSFLNPISSISDMKNLNVPDPEKNLKYVLDSIKIICKELDKKIPLIGFSGSPWTLACYMIEGKCNKIFSKIKKMIYQNSKELHFLLKK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ACIAC (Uroporphyrinogen decarboxylase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=hemE PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.881e-14
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            NVD   E++L P         ILFSDILT    M +     +G+GP     +  +A V ++   D E+ + YV  A+T +R  ++    ++GF G+P+TL  Y VEG  S  +  +K L +S+P ++H +L
Sbjct:   54 NVDYATEVTLQPLERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFARVVRDEAAVAELAVPDMEK-LRYVFDAVTSIRRALDGRVPLIGFSGSPWTLACYMVEGSGSDDYRLVKTLMYSRPDLMHRIL 183          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_HUMAN (Uroporphyrinogen decarboxylase OS=Homo sapiens GN=UROD PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.756e-13
Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  114 EISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPE---ESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            E++L P         I+FSDIL     + +   ++ GKGP   +P+  + +++++R  DPE     + YV +A+T+ R+ +     ++GF GAP+TL +Y VEGG S    + KR  + +P+  H LL+
Sbjct:   67 ELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLR--DPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_DIAST (Uroporphyrinogen decarboxylase OS=Diaphorobacter sp. (strain TPSY) GN=hemE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.756e-13
Identity = 43/131 (32.82%), Postives = 70/131 (53.44%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            NV+   E++L P         ILFSDILT    M +     +G+GP     +  +A+V  +   D ++ + YV  A+T +R  +N    ++GF G+P+TL  Y VEG  S  +  +K L +S+P ++H +L
Sbjct:   54 NVEYATEVTLQPLERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKAVRDEADVAALAVPDLDK-LRYVFDAVTSIRRALNGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRIL 183          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_BURMS2.709e-1432.84Uroporphyrinogen decarboxylase OS=Burkholderia mal... [more]
DCUP_BURM92.709e-1432.84Uroporphyrinogen decarboxylase OS=Burkholderia mal... [more]
DCUP_BURM72.709e-1432.84Uroporphyrinogen decarboxylase OS=Burkholderia mal... [more]
DCUP_DANRE3.538e-1432.81Uroporphyrinogen decarboxylase OS=Danio rerio GN=u... [more]
DCUP_CHRVO6.034e-1433.08Uroporphyrinogen decarboxylase OS=Chromobacterium ... [more]
DCUP_CAMC56.034e-1434.38Uroporphyrinogen decarboxylase OS=Campylobacter cu... [more]
DCUP_WIGBR7.881e-1432.06Uroporphyrinogen decarboxylase OS=Wigglesworthia g... [more]
DCUP_ACIAC7.881e-1433.59Uroporphyrinogen decarboxylase OS=Acidovorax avena... [more]
DCUP_HUMAN1.756e-1332.56Uroporphyrinogen decarboxylase OS=Homo sapiens GN=... [more]
DCUP_DIAST1.756e-1332.82Uroporphyrinogen decarboxylase OS=Diaphorobacter s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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