EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_CARHZ (Uroporphyrinogen decarboxylase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=hemE PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.029e-26
Identity = 61/131 (46.56%), Postives = 84/131 (64.12%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L VE++L P   L     ILF+DIL PL GM I F   + +GPVI +P+ T  +V +VR   PEE VPYV +A+ I+R E+  +  ++GF GAPFTL SY +EGG SK++ + KRL +  P+  H LL K
Sbjct:   49 ELAVEVTLQPVRKLGVDAAILFADILLPLEGMGIGFRFARDEGPVIENPVRTIVDVKKVRVITPEEDVPYVLEAIKILRRELAGKVPLIGFSGAPFTLASYIIEGGGSKNYIQCKRLMWEAPEAWHELLGK 179          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SORC5 (Uroporphyrinogen decarboxylase OS=Sorangium cellulosum (strain So ce56) GN=hemE PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.400e-24
Identity = 55/133 (41.35%), Postives = 87/133 (65.41%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFN 500
            +L +E++L P   L     ILF+DIL PL  M  PF+  KG+GPVI +P+   A ++++R F+PEE + YV  A+ ++R+E++ ++ ++GF GAPFT+ SY VEGG S  +   K+L +S P+   AL+ K +
Sbjct:   49 ELALEVTLQPLR-LGMDAAILFADILLPLEPMGAPFEFAKGEGPVIHEPVRDRAGIERLRVFEPEEGLGYVLDAVRLIRKELDGKTPLIGFAGAPFTMASYLVEGGKSSDYRLTKQLMWSDPEAWSALMGKIS 180          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ACTP7 (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=hemE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.433e-23
Identity = 58/133 (43.61%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    PI   A+VD +   DPE  + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++ ++ PK+LHALL K
Sbjct:   52 NADLACEVTLQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ACTP2 (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=hemE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.433e-23
Identity = 58/133 (43.61%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    PI   A+VD +   DPE  + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++ ++ PK+LHALL K
Sbjct:   52 NADLACEVTLQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VIBCH (Uroporphyrinogen decarboxylase OS=Vibrio cholerae GN=hemE PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 3.192e-23
Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GPV   PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TL +Y VEGGSSK F KIK++ +S+P VLHALL K
Sbjct:   52 NAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VIBC3 (Uroporphyrinogen decarboxylase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=hemE PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 3.192e-23
Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GPV   PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TL +Y VEGGSSK F KIK++ +S+P VLHALL K
Sbjct:   52 NAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ACTPJ (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=hemE PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.169e-23
Identity = 57/133 (42.86%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    PI   A+VD +   DPE  + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++ ++ P++LHALL K
Sbjct:   52 NADLACEVTLQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQILHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_MANSM (Uroporphyrinogen decarboxylase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=hemE PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.213e-22
Identity = 56/133 (42.11%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    PI T + V+ +   DPE+ + YV  A+  +R E+N E  ++GF G+P+TL +Y VEGGS+K F KIK++ +++PK+LH LL K
Sbjct:   52 NADLACEVTLQPLRRYELDAAILFSDILTIPDAMGLGLTFGAGEGPKFDRPIETKSAVENLPIPDPEQELQYVMNAVRTIRRELNGEVPLIGFSGSPWTLATYMVEGGSTKAFTKIKKMMYAEPKLLHKLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_GEOLS (Uroporphyrinogen decarboxylase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=hemE PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.213e-22
Identity = 56/131 (42.75%), Postives = 84/131 (64.12%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L  E+++ P  +L     ILFSDILTP+  M +  D + G  PV  +P+ T A+V+++R  DPE  VPYV +A+ I+R+E+  +  ++GF GAPFTL  Y VEG  SK +  IKR+ ++ P V  AL++K
Sbjct:   49 ELAAEVTIQPVDILGVDAAILFSDILTPVEPMGLKLDFVPG--PVFENPVRTMADVEKLRIPDPEADVPYVLQAIRILRKELAGKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPDVYAALMEK 177          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SERP5 (Uroporphyrinogen decarboxylase OS=Serratia proteamaculans (strain 568) GN=hemE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.584e-22
Identity = 55/133 (41.35%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    PI + A+VD++  FDPE  + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F K+K++ +++P  LH LL K
Sbjct:   52 NAELACEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITSRADVDKLPAFDPEVELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPATLHLLLDK 184          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_CARHZ4.029e-2646.56Uroporphyrinogen decarboxylase OS=Carboxydothermus... [more]
DCUP_SORC58.400e-2441.35Uroporphyrinogen decarboxylase OS=Sorangium cellul... [more]
DCUP_ACTP71.433e-2343.61Uroporphyrinogen decarboxylase OS=Actinobacillus p... [more]
DCUP_ACTP21.433e-2343.61Uroporphyrinogen decarboxylase OS=Actinobacillus p... [more]
DCUP_VIBCH3.192e-2343.61Uroporphyrinogen decarboxylase OS=Vibrio cholerae ... [more]
DCUP_VIBC33.192e-2343.61Uroporphyrinogen decarboxylase OS=Vibrio cholerae ... [more]
DCUP_ACTPJ4.169e-2342.86Uroporphyrinogen decarboxylase OS=Actinobacillus p... [more]
DCUP_MANSM1.213e-2242.11Uroporphyrinogen decarboxylase OS=Mannheimia succi... [more]
DCUP_GEOLS1.213e-2242.75Uroporphyrinogen decarboxylase OS=Geobacter lovley... [more]
DCUP_SERP51.584e-2241.35Uroporphyrinogen decarboxylase OS=Serratia proteam... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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