EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BORPE (Uroporphyrinogen decarboxylase OS=Bordetella pertussis GN=hemE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.108e-13
Identity = 42/132 (31.82%), Postives = 70/132 (53.03%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            N D   E++L P         ILFSDILT    M +  D   G+GP    P+  +++V ++   D + S+ YV  A+  +R E++    ++GF G+P+T+  Y  EG  S  +  IK + + +P +LH +L+
Sbjct:   54 NPDYACEVTLQPLARYPLDAAILFSDILTVPHAMGLGLDFAPGEGPRFAHPVRDESDVAKLAVPDMD-SLRYVFDAVRTIRRELDGRVPLIGFAGSPWTIACYMAEGRGSDDYRLIKSMLYGRPDLLHRILE 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_METFK (Uroporphyrinogen decarboxylase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=hemE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.671e-13
Identity = 41/131 (31.30%), Postives = 71/131 (54.20%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N DL  E++L P         ILFSDILT    M +     +G+GP     +  ++++ ++   D    + YV  A++ +R  ++    ++GF G+P+TL +Y VEG     F  IK++A+++P +LH +L
Sbjct:   52 NTDLATEVTLQPLDRFPLDAAILFSDILTIPDAMGLGLYFEEGEGPKFERTLREESDIRKLAVPDIGSELRYVTDAVSQIRRALDGRVPLIGFSGSPWTLATYMVEGRGGTDFLTIKQMAYARPDLLHHIL 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_BURPP (Uroporphyrinogen decarboxylase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=hemE PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.713e-13
Identity = 40/130 (30.77%), Postives = 70/130 (53.85%), Query Frame = 3
Query:  114 EISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            E++L P         ILFSDILT    M +  + + G+GP    P+ T+ +V ++   D + ++ YV  A+  +R  + +        ++GF G+P+TL  Y VEGG S  F  +K + +++P ++H +L
Sbjct:   59 EVTLQPLDRYPLDAAILFSDILTVPDAMGLGLEFVTGEGPKFVRPVRTEDDVARLAVPDIDATLRYVTDAVREIRTALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLMHRIL 188          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_WOLPP (Uroporphyrinogen decarboxylase OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=hemE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.486e-12
Identity = 40/116 (34.48%), Postives = 71/116 (61.21%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKI 443
            ++DLVVE++L P         I+FSDIL     +    + ++G GP+I  P+ +  E+   +EF+ + + P +  A+  +R +++ E +++GF G P+T+ SY +EGGSSK F+K+
Sbjct:   52 SIDLVVELTLQPIKRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPII-KPVKSSEELKNSQEFETK-TFPILN-AIRKVRSQLSEEKSLIGFAGGPWTVASYIIEGGSSKTFSKV 164          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VARPS (Uroporphyrinogen decarboxylase OS=Variovorax paradoxus (strain S110) GN=hemE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.486e-12
Identity = 42/131 (32.06%), Postives = 66/131 (50.38%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N D   E++L P         ILFSDILT    M +      G+GP    P+  +A V  + E      + YV  A+  +R+ ++    ++GF G+P+TL  Y VEG  S  +  +K + +S+P ++H LL
Sbjct:   54 NTDYATEVTLQPLERYPLDAAILFSDILTVPDAMGLGLSFEAGEGPRFARPVQGEAAVAAL-EVPDMAKLRYVFDAVASIRKALDGRVPLIGFSGSPWTLACYMVEGAGSSDYRLVKSMLYSRPDLMHRLL 183          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_RAT (Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus GN=Urod PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.486e-12
Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  114 EISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPE---ESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            E++L P         I+FSDIL     + +   ++ GKGP   +P+  + +++++R  DP      + YV +A+T+ R+++     ++GF GAP+TL +Y VEGGS K   + KR  + +P   H LL
Sbjct:   64 ELTLEPVRRFPLDAAIIFSDILVVPQALAMEVTMVPGKGPSFPEPLREERDLERLR--DPAAVASELGYVFQAITLTRQQLAGRVPLIGFAGAPWTLMTYMVEGGSFKTMAQAKRWLYQKPVASHKLL 189          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PONAB (Uroporphyrinogen decarboxylase OS=Pongo abelii GN=UROD PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.486e-12
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 3
Query:  159 ILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPE---ESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            I+FSDIL     + +   ++ GKGP   +P+  + +++ +R  DPE     + YV +A+T+ R+ +     ++GF GAP+TL +Y VEGG S    + KR  + +P+  H LL+
Sbjct:   82 IIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLECLR--DPEVVASELDYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VEREI (Uroporphyrinogen decarboxylase OS=Verminephrobacter eiseniae (strain EF01-2) GN=hemE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.941e-12
Identity = 46/152 (30.26%), Postives = 73/152 (48.03%), Query Frame = 3
Query:   33 RFGSGYPGSTHTSASLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            R+   Y  S   + S      +VD   E++L P         ILFSDILT    M +     +G+GP +   +  +A V  +   D    + YV  A+  +R  +N    ++GF G+P+TL  Y VEG  S  +  +K L +S+P ++H +L
Sbjct:   33 RYLPEYQASRARAGSFMGLATSVDYATEVTLQPLERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRLAKVVRDEATVAALAVPDMAR-LRYVFDAVASIRRALNGRVPLIGFSGSPWTLACYMVEGRGSDDYRLVKGLMYSRPDLMHRIL 183          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_RALEH (Uroporphyrinogen decarboxylase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hemE PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.535e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            N     E++L P         ILFSDILT    M +     +G+GP    P+ T+A+V ++   D   S+ YV  A++ +R  +  +      ++GF G+P+TL  Y VEGG S  F  +K + + +P ++H +L+
Sbjct:   52 NPAYATEVTLQPLDRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAHPLRTEADVQKLAVPDMA-SLQYVFDAVSEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMHRILE 186          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PARUW (Uroporphyrinogen decarboxylase OS=Protochlamydia amoebophila (strain UWE25) GN=hemE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.535e-12
Identity = 48/165 (29.09%), Postives = 82/165 (49.70%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTLYG*IWNIPNLT*ELT----AFQTSNPWA 578
            N +L+ E++L P         ILFSDIL     + +        GP+I  PI    +++++   +   S+ +V + +  ++  +N    ++GF GAPFT+ SY +EG +S+ F KIK   + +P+  H LL+K        W+I  L  ++     A Q  + WA
Sbjct:   73 NPELIAEVTLLPIEAYQVDAAILFSDILVIPEALKVGVRFEDKVGPIIEKPITNLHDIEKLAMPEDLTSLEFVKEGIRCLQPRLN--VPLIGFCGAPFTVASYMIEGKTSRDFKKIKHWMYHEPQGFHTLLRKIAD-----WSIAYLNMQIDAGVHALQIFDSWA 230          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_BORPE5.108e-1331.82Uroporphyrinogen decarboxylase OS=Bordetella pertu... [more]
DCUP_METFK6.671e-1331.30Uroporphyrinogen decarboxylase OS=Methylobacillus ... [more]
DCUP_BURPP8.713e-1330.77Uroporphyrinogen decarboxylase OS=Burkholderia phy... [more]
DCUP_WOLPP1.486e-1234.48Uroporphyrinogen decarboxylase OS=Wolbachia pipien... [more]
DCUP_VARPS1.486e-1232.06Uroporphyrinogen decarboxylase OS=Variovorax parad... [more]
DCUP_RAT1.486e-1232.81Uroporphyrinogen decarboxylase (Fragment) OS=Rattu... [more]
DCUP_PONAB1.486e-1234.21Uroporphyrinogen decarboxylase OS=Pongo abelii GN=... [more]
DCUP_VEREI1.941e-1230.26Uroporphyrinogen decarboxylase OS=Verminephrobacte... [more]
DCUP_RALEH2.535e-1231.62Uroporphyrinogen decarboxylase OS=Ralstonia eutrop... [more]
DCUP_PARUW2.535e-1229.09Uroporphyrinogen decarboxylase OS=Protochlamydia a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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