EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_LEIXX (Uroporphyrinogen decarboxylase OS=Leifsonia xyli subsp. xyli GN=hemE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.311e-12
Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 3
Query:  114 EISLPPWHVL*PHGV---ILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPE----ESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQP 467
            EI+L P      HGV   I FSDI+ PL    +  +I  GKGPV    + T A+VD++   DP     ++   V +A+ +   E+N E+ ++GF GAPFTL +Y VEGG SK   + + L  + P
Sbjct:   70 EITLQPVR---RHGVDAGIFFSDIVVPLKLAGVEVEIQPGKGPVFERAVRTSADVDRLSAVDPAALAADTFAAVQEAVRLTTAELN-ETPLIGFAGAPFTLAAYLVEGGPSKDHLRARTLMHAAP 190          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_DROVI (Uroporphyrinogen decarboxylase OS=Drosophila virilis GN=Updo PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.311e-12
Identity = 39/123 (31.71%), Postives = 66/123 (53.66%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPK 470
            +L  E+++ P         I+FSDIL     + +  ++  G GPV+  PI T  ++ ++        + YVG A+T+MR +++    ++GF GAP+TL  Y +EGG SK  +K K    + P+
Sbjct:   70 ELACEVTMQPLRRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPICTPEDLKRLTPDGALSRLTYVGDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTNYPE 192          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_RALME (Uroporphyrinogen decarboxylase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=hemE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.324e-12
Identity = 43/135 (31.85%), Postives = 72/135 (53.33%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N     E++L P         ILFSDILT    M +     +G+GP    P+ T+A+V ++   D   S+ YV  A++ +R+ +  +      ++GF G+P+TL  Y VEGG S  F  +K + +++P ++H +L
Sbjct:   52 NPAYATEVTLQPLDRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAHPLRTEADVAKLAVPDMA-SLQYVFDAVSEIRKALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYARPDLMHRIL 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_RALPJ (Uroporphyrinogen decarboxylase OS=Ralstonia pickettii (strain 12J) GN=hemE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.648e-12
Identity = 42/130 (32.31%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  114 EISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            E++L P         ILFSDILT    M +     +G+GP    P+ T+A+V  +   D   S+ YV  A+  +R  +  +      ++GF G+P+TL  Y VEGG S  F  +K + +++P ++H +L+
Sbjct:   59 EVTLQPLDRYALDAAILFSDILTVPDAMGLGLSFAQGEGPRFAKPVRTEADVAALSVPDMS-SLQYVFDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILE 187          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_RALEJ (Uroporphyrinogen decarboxylase OS=Ralstonia eutropha (strain JMP134) GN=hemE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.376e-12
Identity = 43/135 (31.85%), Postives = 69/135 (51.11%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            N     E++L P         ILFSDILT    M +     +G+GP    P+ T+A+V ++   D   S+ YV  A+  +R  +  +      ++GF G+P+TL  Y VEGG S  F  +K + + +P ++H +L
Sbjct:   52 NPAYATEVTLQPLDRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFARPLRTEADVQKLAVPDMA-SLQYVFDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMHRIL 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_GLUOX (Uroporphyrinogen decarboxylase OS=Gluconobacter oxydans GN=hemE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.643e-11
Identity = 40/129 (31.01%), Postives = 74/129 (57.36%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALL 488
            D+  E+++ P       G ILFSDIL     M    + I G+GPV+   I ++A++ ++     +++V  V + L+ + +E+ + + +LGF G+PFT++ Y VEGG S+ F + +R+  + P +   L+
Sbjct:   59 DMATELTIQPIRRYGMDGAILFSDILILPWAMGQSLEFIDGRGPVL-GAIRSEADLARLDPKRVQDAVAPVRETLSRLTKELPDVTTLLGFAGSPFTVSCYMVEGGGSRDFAETRRMMQTNPALFDRLI 186          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_METPP (Uroporphyrinogen decarboxylase OS=Methylibium petroleiphilum (strain PM1) GN=hemE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.146e-11
Identity = 46/158 (29.11%), Postives = 77/158 (48.73%), Query Frame = 3
Query:   33 RFGSGYPGSTHTSASLRAPP*NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESA-----VLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQ 491
            R+ S Y  +   + S      N     E++L P         ILFSDILT    M +     +G+GP    P+  +A+V +++  D E+ + YV  A+  +R  +    A     ++GF G+P+TL  Y VEG  S  +  +K L + +P ++H +L+
Sbjct:   39 RYLSEYRDTRAKAGSFMGLATNPQYATEVTLQPLDRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAHPLRDEADVAKLQVPDMEK-LRYVFDAVASIRRALAPAGAPGRVPLIGFSGSPWTLACYMVEGAGSDDYRLVKTLLYRRPDLMHRILE 195          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_DROME (Uroporphyrinogen decarboxylase OS=Drosophila melanogaster GN=Updo PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.146e-11
Identity = 38/123 (30.89%), Postives = 63/123 (51.22%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPK 470
            +L  E+++ P         I+FSDIL     + +  ++  G GPV+  PI    ++ ++        + YVG A+T+MR ++     ++GF GAP+TL  Y +EGG SK  +K K      P+
Sbjct:   59 ELACEVTMQPLRRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTPDGALSRLSYVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPE 181          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_THEAC (Uroporphyrinogen decarboxylase OS=Thermoplasma acidophilum GN=hemE PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.803e-11
Identity = 47/166 (28.31%), Postives = 80/166 (48.19%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTLYG*IWNIPNLT*ELTAFQTSNPWAMEPHSGE 599
            D++V+++  P   +     I+F+DI TPLSGM +    +   GPV+ + I     +  V EFDP      V KA++  RE       ++GF G P TL SY +  G  +   ++KR+  ++ K   A++ +   +      +  ++  + AFQ  + WA     GE
Sbjct:   48 DVIVDVTHDPVDRIGVDAAIIFADITTPLSGMGLRVRFLDSVGPVVENNIEKSG-ISAVEEFDPSSFSHPVLKAISKYRERY--ADPLIGFAGGPVTLLSYIISDGVDRDLFRVKRMMITEEKAYQAVMTRLTDMIIEFARM-QISAGVDAFQIFDSWAGYLSPGE 209          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_HYDS0 (Uroporphyrinogen decarboxylase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=hemE PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.803e-11
Identity = 45/135 (33.33%), Postives = 70/135 (51.85%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFN 500
            NV+    +SL P  +L    VI+FSDIL  L  M I      G+GPV+    + + +   ++       + YV + L +++E+  +   V+GF GAPFTL SY +E  SS+ F K K   +   K  H L++K +
Sbjct:   49 NVEDAAIVSLQPVDILGVDAVIMFSDILVLLEPMGIKVSFEAGEGPVL----DHNFDFKNLKSQGISGDLSYVFELLKVLKEK--SPVPVIGFCGAPFTLASYVIEKESSRDFTKTKVFMYENQKDFHILMEKLS 177          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_LEIXX3.311e-1238.40Uroporphyrinogen decarboxylase OS=Leifsonia xyli s... [more]
DCUP_DROVI3.311e-1231.71Uroporphyrinogen decarboxylase OS=Drosophila viril... [more]
DCUP_RALME4.324e-1231.85Uroporphyrinogen decarboxylase OS=Ralstonia metall... [more]
DCUP_RALPJ5.648e-1232.31Uroporphyrinogen decarboxylase OS=Ralstonia picket... [more]
DCUP_RALEJ7.376e-1231.85Uroporphyrinogen decarboxylase OS=Ralstonia eutrop... [more]
DCUP_GLUOX1.643e-1131.01Uroporphyrinogen decarboxylase OS=Gluconobacter ox... [more]
DCUP_METPP2.146e-1129.11Uroporphyrinogen decarboxylase OS=Methylibium petr... [more]
DCUP_DROME2.146e-1130.89Uroporphyrinogen decarboxylase OS=Drosophila melan... [more]
DCUP_THEAC2.803e-1128.31Uroporphyrinogen decarboxylase OS=Thermoplasma aci... [more]
DCUP_HYDS02.803e-1133.33Uroporphyrinogen decarboxylase OS=Hydrogenobaculum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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