EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VIBPA (Uroporphyrinogen decarboxylase OS=Vibrio parahaemolyticus GN=hemE PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.702e-22
Identity = 54/133 (40.60%), Postives = 82/133 (61.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GPV  +PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TL +Y VEGGSSK F KIK++ +++P+ LH LL K
Sbjct:   52 NAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_HAES2 (Uroporphyrinogen decarboxylase OS=Haemophilus somnus (strain 2336) GN=hemE PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.702e-22
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    PI+  + V  +   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++ +S+PK+LH LL K
Sbjct:   52 NADLACEVTLQPLRRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPIDNKSAVQNLPIPDPEQELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPKILHLLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_COLP3 (Uroporphyrinogen decarboxylase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=hemE PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.702e-22
Identity = 54/133 (40.60%), Postives = 80/133 (60.15%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E+++ P         ILFSDILT    M +      G+GP    PI   A+VD++   DPE+ + YV  A+  +R+E+  E  ++GF G+P+TL +Y +EGGSSK F KIK++ F++P+ LH LL K
Sbjct:   52 NAELACEVTIQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIAVPDPEDELGYVMNAVRTIRKELKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMFAEPQTLHLLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VIBVY (Uroporphyrinogen decarboxylase OS=Vibrio vulnificus (strain YJ016) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.529e-22
Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP+  +PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TL +Y VEGGSSK F KIK++ +++P+ LH LL K
Sbjct:   52 NAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFSTGEGPIFDNPITCKADVEKIGVPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VIBVU (Uroporphyrinogen decarboxylase OS=Vibrio vulnificus GN=hemE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.529e-22
Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP+  +PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TL +Y VEGGSSK F KIK++ +++P+ LH LL K
Sbjct:   52 NAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFSTGEGPIFDNPITCKADVEKIGVPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_VIBHB (Uroporphyrinogen decarboxylase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.529e-22
Identity = 54/133 (40.60%), Postives = 81/133 (60.90%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GPV   PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TL +Y VEGGSSK F KIK++ +++P+ LH LL K
Sbjct:   52 NAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_THET8 (Uroporphyrinogen decarboxylase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.609e-22
Identity = 52/133 (39.10%), Postives = 83/133 (62.41%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N ++  E++L P   L     ILF+DI TPL GM +   +++ KGPVI +P+  +  V+ +R   PEE+VP+V + + I++ E+     ++GF GAPFTL SY VEGG S+ F ++K L + +  + H L++K
Sbjct:   50 NPEVCAEVTLLPVKALGVDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRPLVPEEAVPFVLETIRILKREL--PVPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWHRLMEK 180
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_THET2 (Uroporphyrinogen decarboxylase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=hemE PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.609e-22
Identity = 52/133 (39.10%), Postives = 83/133 (62.41%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N ++  E++L P   L     ILF+DI TPL GM +   +++ KGPVI +P+  +  V+ +R   PEE+VP+V + + I++ E+     ++GF GAPFTL SY VEGG S+ F ++K L + +  + H L++K
Sbjct:   50 NPEVCAEVTLLPVKALGVDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRPLVPEEAVPFVLETIRILKREL--PVPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWHRLMEK 180
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PSYIN (Uroporphyrinogen decarboxylase OS=Psychromonas ingrahamii (strain 37) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.609e-22
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +     +G+GP +  PI    +VD +   DPE  + YV  A+  +R E+     ++GF G+P+TL +Y VEGGSSK F KIK++AF +P++LH LL K
Sbjct:   52 NADLACEVTLQPLRRFDLDAAILFSDILTIPDAMGLGLYFAEGEGPKLKRPITCKKDVDNLIMPDPEGELQYVMNAVRTIRRELKGSVPLIGFAGSPWTLATYMVEGGSSKAFTKIKKMAFCEPQLLHTLLDK 184
[Close]
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PSEHT (Uroporphyrinogen decarboxylase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.609e-22
Identity = 54/133 (40.60%), Postives = 82/133 (61.65%), Query Frame = 3 
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    PI++ ++V ++ + DP + + YV  A++ +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++AF++P+ LH LL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLSDVKKIPKLDPNDDLGYVMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEPQTLHLLLDK 184
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_VIBPA2.702e-2240.60Uroporphyrinogen decarboxylase OS=Vibrio parahaemo... [more]
DCUP_HAES22.702e-2242.11Uroporphyrinogen decarboxylase OS=Haemophilus somn... [more]
DCUP_COLP32.702e-2240.60Uroporphyrinogen decarboxylase OS=Colwellia psychr... [more]
DCUP_VIBVY3.529e-2239.85Uroporphyrinogen decarboxylase OS=Vibrio vulnificu... [more]
DCUP_VIBVU3.529e-2239.85Uroporphyrinogen decarboxylase OS=Vibrio vulnificu... [more]
DCUP_VIBHB3.529e-2240.60Uroporphyrinogen decarboxylase OS=Vibrio harveyi (... [more]
DCUP_THET84.609e-2239.10Uroporphyrinogen decarboxylase OS=Thermus thermoph... [more]
DCUP_THET24.609e-2239.10Uroporphyrinogen decarboxylase OS=Thermus thermoph... [more]
DCUP_PSYIN4.609e-2242.11Uroporphyrinogen decarboxylase OS=Psychromonas ing... [more]
DCUP_PSEHT4.609e-2240.60Uroporphyrinogen decarboxylase OS=Pseudoalteromona... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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