EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_PSEA6 (Uroporphyrinogen decarboxylase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.609e-22
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +     +G+GP    PI + A++  +   DPE+ + YV  A+  +R+ +  E  ++GF G+P+TL +Y +EGGSSK F KIK++AFS P+ LH LL K
Sbjct:   52 NAELACEVTLQPLRRFDLDAAILFSDILTIPDAMGLGLYFEQGEGPKFSKPITSMADIQNLPAPDPEQELQYVMNAVRTIRKNLQGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMAFSDPQALHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_KLEP3 (Uroporphyrinogen decarboxylase OS=Klebsiella pneumoniae (strain 342) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.609e-22
Identity = 55/133 (41.35%), Postives = 81/133 (60.90%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    PI + A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ +++P+ LHALL+K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPIKSKADVDKLPIPDPEQELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALHALLEK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_HAES1 (Uroporphyrinogen decarboxylase OS=Haemophilus somnus (strain 129Pt) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.609e-22
Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N DL  E++L P         ILFSDILT    M +      G+GP    P+   + V  +   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F KIK++ +S+PK+LH LL K
Sbjct:   52 NADLACEVTLQPLRRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPVENKSAVQNLPIPDPEQELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPKILHLLLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_GEOMG (Uroporphyrinogen decarboxylase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=hemE PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.020e-22
Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L  E++L P  +L     ILFSDILTP+  M +  D + G  PV   P+ T A+V+++R  +PEE VPYV   + I+R+E+     ++GF GAPFTL  Y VEG  SK +  IKR+ ++ P+V  AL+ K
Sbjct:   49 ELAAEVTLQPVDILGVDAAILFSDILTPVEPMGLKLDFVPG--PVFETPVRTMADVERLRIPNPEEDVPYVLDTIKILRKELAGRVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVYAALMDK 177          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_CHLSY (Uroporphyrinogen decarboxylase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=hemE PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.863e-22
Identity = 51/135 (37.78%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            ++  E++L P         I+F+DIL PL G+ +     KG+GPVI +PI +  +V  +R  DP E+V Y   AL +++ E+N    ++GF GAPFTL SY +EGG S+ +   KR  + QP   H L+++ + L
Sbjct:   49 EVAAEVTLQPVQAFGVDAAIIFADILPPLEGLGLQLTYEKGEGPVIHNPIRSPHDVSVLRSCDPRETVAYTLAALQLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSREYRLTKRFMYEQPAAWHDLMERLSRL 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_CHLAA (Uroporphyrinogen decarboxylase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=hemE PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.863e-22
Identity = 51/135 (37.78%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            ++  E++L P         I+F+DIL PL G+ +     KG+GPVI +PI +  +V  +R  DP E+V Y   AL +++ E+N    ++GF GAPFTL SY +EGG S+ +   KR  + QP   H L+++ + L
Sbjct:   49 EVAAEVTLQPVQAFGVDAAIIFADILPPLEGLGLQLTYEKGEGPVIHNPIRSPHDVSVLRSCDPRETVAYTLAALQLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSREYRLTKRFMYEQPAAWHDLMERLSRL 182          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_KLEP7 (Uroporphyrinogen decarboxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.027e-21
Identity = 54/133 (40.60%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+ + A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ +++P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVKSKADVDKLPIPDPEQELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_DEIRA (Uroporphyrinogen decarboxylase OS=Deinococcus radiodurans GN=hemE PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.027e-21
Identity = 53/136 (38.97%), Postives = 82/136 (60.29%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNES-AVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQKFNTL 506
            DL  EI+L P   +     ILF+DILTPL  M +  D + G GPVI +PINT  +VD +      E++PY  +++ ++  E+N+    ++GF GAPFTL SY +EG  S+++ K KR  +++P     L+ KF ++
Sbjct:   50 DLAAEITLQPIKAMPLDAAILFNDILTPLPTMGLSLDFVGGVGPVIHNPINTPKDVDVLGVPATAETMPYTAESIRLLMPELNSRGIPLIGFVGAPFTLASYAIEGKGSRNYEKTKRFMYAEPAAWARLMGKFESV 185          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSL (Uroporphyrinogen decarboxylase OS=Geobacter sulfurreducens GN=hemE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.752e-21
Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L  E+++ P  +L     ILFSDILTP+  M +  D + G  PV   P+ T A+V+++R  +PEE VPYV   + I+R E+     ++GF GAPFTL  Y VEG  SK +  IKR+ ++ P V  AL+ K
Sbjct:   49 ELAAEVTIQPIDILNVDAAILFSDILTPVEPMGLKLDFVPG--PVFEHPVRTMADVEKLRIPNPEEDVPYVLDTIKILRRELAGRVPLIGFGGAPFTLACYMVEGKGSKDWANIKRMMYAAPDVYAALMDK 177          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHISS (Uroporphyrinogen decarboxylase OS=Shigella sonnei (strain Ss046) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_PSEA64.609e-2240.60Uroporphyrinogen decarboxylase OS=Pseudoalteromona... [more]
DCUP_KLEP34.609e-2241.35Uroporphyrinogen decarboxylase OS=Klebsiella pneum... [more]
DCUP_HAES14.609e-2241.35Uroporphyrinogen decarboxylase OS=Haemophilus somn... [more]
DCUP_GEOMG6.020e-2242.75Uroporphyrinogen decarboxylase OS=Geobacter metall... [more]
DCUP_CHLSY7.863e-2237.78Uroporphyrinogen decarboxylase OS=Chloroflexus aur... [more]
DCUP_CHLAA7.863e-2237.78Uroporphyrinogen decarboxylase OS=Chloroflexus aur... [more]
DCUP_KLEP71.027e-2140.60Uroporphyrinogen decarboxylase OS=Klebsiella pneum... [more]
DCUP_DEIRA1.027e-2138.97Uroporphyrinogen decarboxylase OS=Deinococcus radi... [more]
DCUP_GEOSL1.752e-2141.98Uroporphyrinogen decarboxylase OS=Geobacter sulfur... [more]
DCUP_SHISS2.288e-2140.60Uroporphyrinogen decarboxylase OS=Shigella sonnei ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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