EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHIFL (Uroporphyrinogen decarboxylase OS=Shigella flexneri GN=hemE PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHIF8 (Uroporphyrinogen decarboxylase OS=Shigella flexneri serotype 5b (strain 8401) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHIDS (Uroporphyrinogen decarboxylase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHIBS (Uroporphyrinogen decarboxylase OS=Shigella boydii serotype 4 (strain Sb227) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SHIB3 (Uroporphyrinogen decarboxylase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_GEOUR (Uroporphyrinogen decarboxylase OS=Geobacter uraniireducens (strain Rf4) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L  E+S+ P  +L     ILFSDILTP+  M +  D + G  PV   PI T A+V+++R    E+ VPYV + + I+R E+ N+  ++GF GAPFTL  Y VEG  SK +  +KR+ ++ P+V  AL++K
Sbjct:   49 ELAAEVSIQPVDILGVDAAILFSDILTPVEPMGMALDFVPG--PVFEHPIRTMADVEKLRIPQMEQDVPYVLETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATMKRMMYAAPEVYAALMEK 177          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSF (Uroporphyrinogen decarboxylase OS=Geobacter sp. (strain FRC-32) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L  E+++ P  +L     ILFSDILTP+  M +  D + G  PV   PI T A+V+++R    E+ VPYV + + I+R E+ N+  ++GF GAPFTL  Y VEG  SK +  IKR+ ++ P+V  AL++K
Sbjct:   49 ELAAEVTIQPVDILGVDAAILFSDILTPVEPMGMALDFVPG--PVFEHPIRTMADVEKLRIPQMEQDVPYVLETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVYAALMEK 177          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECOUT (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain UTI89 / UPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECOSM (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECOSE (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain SE11) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_SHIFL2.288e-2140.60Uroporphyrinogen decarboxylase OS=Shigella flexner... [more]
DCUP_SHIF82.288e-2140.60Uroporphyrinogen decarboxylase OS=Shigella flexner... [more]
DCUP_SHIDS2.288e-2140.60Uroporphyrinogen decarboxylase OS=Shigella dysente... [more]
DCUP_SHIBS2.288e-2140.60Uroporphyrinogen decarboxylase OS=Shigella boydii ... [more]
DCUP_SHIB32.288e-2140.60Uroporphyrinogen decarboxylase OS=Shigella boydii ... [more]
DCUP_GEOUR2.288e-2141.98Uroporphyrinogen decarboxylase OS=Geobacter uranii... [more]
DCUP_GEOSF2.288e-2141.98Uroporphyrinogen decarboxylase OS=Geobacter sp. (s... [more]
DCUP_ECOUT2.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOSM2.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOSE2.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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