EY674958

Overview
NameEY674958
Unique NameEY674958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECO81 (Uroporphyrinogen decarboxylase OS=Escherichia coli O81 (strain ED1a) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECO7I (Uroporphyrinogen decarboxylase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECO5E (Uroporphyrinogen decarboxylase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECO57 (Uroporphyrinogen decarboxylase OS=Escherichia coli O157:H7 GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECO55 (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain 55989 / EAEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECO45 (Uroporphyrinogen decarboxylase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECO27 (Uroporphyrinogen decarboxylase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ECO24 (Uroporphyrinogen decarboxylase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.288e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ ++ P+ LHALL K
Sbjct:   52 NAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_SALTO (Uroporphyrinogen decarboxylase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.988e-21
Identity = 56/134 (41.79%), Postives = 83/134 (61.94%), Query Frame = 3
Query:  102 DLVVEISLPPWHVL*PHGV---ILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            +L+ EI+L P      HGV   ILFSDI+ P++   +  DI+ G GPV+ DP+ T A+VD++R     E VPYV +A+ ++  E+   + ++GF GAPFTL SY +EGG S++  K K L +  P + HAL  +
Sbjct:   75 ELITEITLQPVR---RHGVDAAILFSDIVVPVAAAGVALDIVPGTGPVVNDPVTTAADVDRIRPIS-REDVPYVDEAVRMLVGEL-GATPLIGFAGAPFTLASYLIEGGPSRNHTKTKALMYGDPDLWHALASR 203          
BLAST of EY674958 vs. ExPASy Swiss-Prot
Match: DCUP_ENT38 (Uroporphyrinogen decarboxylase OS=Enterobacter sp. (strain 638) GN=hemE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.902e-21
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   96 NVDLVVEISLPPWHVL*PHGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTIMREEVNNESAVLGFEGAPFTLTSYEVEGGSSKHFNKIKRLAFSQPKVLHALLQK 494
            N +L  E++L P         ILFSDILT    M +      G+GP    PI + A++D++   DPE  + YV  A+  +R E+  E  ++GF G+P+TL +Y VEGGSSK F  IK++ +++P  LHALL K
Sbjct:   52 NAELACEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSPIKSKADIDKLPIPDPEGELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPMALHALLDK 184          
The following BLAST results are available for this feature:
BLAST of EY674958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
DCUP_ECO812.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO7I2.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO5E2.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO572.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO552.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO452.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO272.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO242.288e-2140.60Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_SALTO2.988e-2141.79Uroporphyrinogen decarboxylase OS=Salinispora trop... [more]
DCUP_ENT383.902e-2140.60Uroporphyrinogen decarboxylase OS=Enterobacter sp.... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-H01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674958 ID=EY674958; Name=EY674958; organism=Citrus sinensis; type=EST; length=957bp
ACACACTCAACTAATTCAATTGAAAGGTTACGCGGTTCGGGTCCGGATAC
CCGGGTTCAACCCACACTTCCGCTTCATTACGTGCACCCCCTTAAAATGT
TGATCTTGTTGTGGAAATTTCTCTTCCCCCGTGGCATGTTTTATAGCCAC
ATGGTGTCATTTTATTCTCTGACATTTTAACTCCTCTTTCTGGGATGAAT
ATACCTTTTGACATTATCAAGGGTAAGGGTCCTGTCATATTTGATCCTAT
AAACACAGATGCAGAAGTTGACCAAGTGAGAGAATTTGATCCTGAGGAGT
CAGTTCCCTATGTTGGGAAAGCATTGACTATCATGCGAGAAGAGGTAAAC
AATGAATCAGCAGTTCTGGGTTTTGAAGGGGCTCCTTTCACCCTGACGTC
ATATGAGGTTGAGGGTGGTTCATCGAAGCACTTCAACAAAATAAAGCGAC
TAGCTTTCTCCCAACCCAAGGTCCTCCATGCATTGCTTCAGAAATTTAAC
ACCCTCTATGGCTAGATATGGAACATACCCAACCTGACCTAGGAGCTCAC
GGCTTTCCAAACCTCCAATCCATGGGCCATGGAACCTCATTCAGGTGAAA
TTTGAAAAGTTATATCGGCTTTAGCTTGATGCTAATTGTAAATCCCTGTG
TACAAATACATTCCTGATCTCTCTATAATTCCTTTTACCAATGGGACTAG
TTGGCTGCGTAAAAAAGATACTTTAAACGGAGATGAAGATTAGTAACTTG
ATCTGGAACATTGACTAGGTGAAAGGTAATCGGCAATTTGGGCCCCAAAC
TAGACAATAAAGGAAATGCACACCTGGGTAACTTTTTCGAGTAATAAAAC
TACACAGCACAAGCGATAAAGGGATCAAGTGAAAAAACGGTGAACTAGTA
GGAAAGTTAATGTCTGAGAACACAAGTATTAAGATACGAAAAAAAAAAGA
AACAAGA
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