EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSM (Uroporphyrinogen decarboxylase OS=Geobacter sp. (strain M21) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.181e-36
Identity = 79/192 (41.15%), Postives = 120/192 (62.50%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVKTT 577
            F E  +  +L  E+++QP  +   D  ILFSDILTP+  M +  D   G  PV   PI T A+V+ ++    E  VPYV  A+ +LR+E+  +  ++GF GAPFTLA Y+VEG  SK F+ +K++ ++ P+V  AL+ K TT   +Y+  Q   GAQA+QIFD+W   LSP D+E++ LPY +++++ +  T
Sbjct:   41 FLELCKTPELATEVTVQPVDILGVDAAILFSDILTPIEPMGMELDFTPG--PVFAKPIRTMADVEALKIPKMETDVPYVLDAVKLLRKELAAKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVYAALMEKITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRT 230          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_GEOBB (Uroporphyrinogen decarboxylase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.181e-36
Identity = 79/192 (41.15%), Postives = 120/192 (62.50%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVKTT 577
            F E  +  +L  E+++QP  +   D  ILFSDILTP+  M +  D   G  PV   PI T A+V+ ++    E  VPYV  A+ +LR+E+  +  ++GF GAPFTLA Y+VEG  SK F+ +K++ ++ P+V  AL+ K TT   +Y+  Q   GAQA+QIFD+W   LSP D+E++ LPY +++++ +  T
Sbjct:   41 FLELCKTPELATEVTVQPVDILGVDAAILFSDILTPIEPMGMELDFTPG--PVFAKPIRTMADVEALKIPKMETDVPYVLDAVKLLRKELATKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVYAALMDKITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRT 230          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHESW (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain W3-18-1) GN=hemE PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.542e-36
Identity = 79/187 (42.25%), Postives = 117/187 (62.57%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + +FSL Y+++IVD
Sbjct:   46 FMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHEPC (Uroporphyrinogen decarboxylase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=hemE PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.542e-36
Identity = 79/187 (42.25%), Postives = 117/187 (62.57%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N    ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + +FSL Y+++IVD
Sbjct:   46 FMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHEDO (Uroporphyrinogen decarboxylase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=hemE PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.542e-36
Identity = 79/187 (42.25%), Postives = 117/187 (62.57%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F     N +L  E++LQP   +K D  ILFSDILT    M +     +G+GP    P +T   + ++   DPE+ + YV +A++ +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + +FSL Y+++IVD
Sbjct:   46 FMSLCRNAELACEVTLQPLRRYKLDAAILFSDILTVPDAMGLGLYFEEGEGPRFERPTDTVDAIKKLCIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_HAHCH (Uroporphyrinogen decarboxylase OS=Hahella chejuensis (strain KCTC 2396) GN=hemE PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.542e-36
Identity = 79/190 (41.58%), Postives = 118/190 (62.11%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +  +N +   E++LQP   F+ D  ILFSDILT    M +      G+GP     + T+A+V+ +   D +  + YV  A+  +R E+N    ++GF G+P+TLA+Y+VEGGSSK F +IK+LA+ QP++LH LL K   S+A Y+  Q   GAQAVQIFD+W   L+   + +FSL Y+K+IV  ++
Sbjct:   46 FMDLCKNAEFACEVTLQPLERFELDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVRTEADVNALHMPDADTDLGYVMNAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFREIKKLAYGQPELLHLLLDKLADSVADYLNAQIRAGAQAVQIFDTWGGALTAAGYLEFSLAYMKKIVSKLQ 235          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_CHLSY (Uroporphyrinogen decarboxylase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=hemE PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.542e-36
Identity = 76/190 (40.00%), Postives = 115/190 (60.53%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +  +  ++  E++LQP   F  D  I+F+DIL PL G+ +     KG+GPVI +PI +  +V  +R  DP E+V Y   AL +++ E+N    ++GF GAPFTLASY +EGG S+ +   KR  + QP   H L+ + +  +A Y+  Q + GA AVQIFDSWA  LSP D+  + L + + +V T++
Sbjct:   41 FLQMVKTPEVAAEVTLQPVQAFGVDAAIIFADILPPLEGLGLQLTYEKGEGPVIHNPIRSPHDVSVLRSCDPRETVAYTLAALQLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSREYRLTKRFMYEQPAAWHDLMERLSRLVADYLIAQIEAGADAVQIFDSWAGALSPADYRAYVLRHTQALVQTIR 229          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_CHLAA (Uroporphyrinogen decarboxylase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=hemE PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.542e-36
Identity = 76/190 (40.00%), Postives = 115/190 (60.53%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +  +  ++  E++LQP   F  D  I+F+DIL PL G+ +     KG+GPVI +PI +  +V  +R  DP E+V Y   AL +++ E+N    ++GF GAPFTLASY +EGG S+ +   KR  + QP   H L+ + +  +A Y+  Q + GA AVQIFDSWA  LSP D+  + L + + +V T++
Sbjct:   41 FLQMVKTPEVAAEVTLQPVQAFGVDAAIIFADILPPLEGLGLQLTYEKGEGPVIHNPIRSPHDVSVLRSCDPRETVAYTLAALQLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSREYRLTKRFMYEQPAAWHDLMERLSRLVADYLIAQIEAGADAVQIFDSWAGALSPADYRAYVLRHTQALVQTIR 229          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ERWCT (Uroporphyrinogen decarboxylase OS=Erwinia carotovora subsp. atroseptica GN=hemE PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.014e-36
Identity = 79/190 (41.58%), Postives = 119/190 (62.63%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    PI + A+V ++   DPE+ + YV  A+  +R+ +  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ F++PK LH LL K   S+  Y+  Q   GAQAV +FD+W   LS  D+++FSL Y+ +IVD+++
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVKLPVPDPEQELGYVMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLHLLLDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLHYMHKIVDSLQ 235          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_DESPS (Uroporphyrinogen decarboxylase OS=Desulfotalea psychrophila GN=hemE PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.376e-36
Identity = 78/190 (41.05%), Postives = 122/190 (64.21%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F E  +N  L VE++LQP  +   D  ILFSDIL  +  M    +  +G GPV  +PI     +D +   D +++  +V + + +LR E+  +  ++GF GAPFT A+Y++EGGSSK F + K++ F+QP++ H ++ K T +   Y+Q QA  GAQA+QIFDSWA  L+P DFE F+LPY+++I+ +++
Sbjct:   41 FLELCKNPALCVEVTLQPVDLLGMDAAILFSDILILMEAMGAKLEFNEGCGPVFPNPIKDQTALDALIIPDADDATGFVMETIRLLRGEL--QVPLIGFAGAPFTCATYLIEGGSSKVFWETKKMMFTQPELFHGIMEKITQATILYLQAQARAGAQALQIFDSWAGVLAPCDFEVFALPYVRRIIASLQ 228          

HSP 2 Score: 21.9422 bits (45), Expect = 2.376e-36
Identity = 13/38 (34.21%), Postives = 19/38 (50.00%), Query Frame = 1
Query:  625 LLERLALNRVEVVSLEWAVELG*KGNGEFGPQTLAFQG 738
            LLE  A +   V+ L+W + +G  G    G   +A QG
Sbjct:  244 LLEMSASSGASVLGLDWRINIGDAGKRVPG---IALQG 278          
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_GEOSM1.181e-3641.15Uroporphyrinogen decarboxylase OS=Geobacter sp. (s... [more]
DCUP_GEOBB1.181e-3641.15Uroporphyrinogen decarboxylase OS=Geobacter bemidj... [more]
DCUP_SHESW1.542e-3642.25Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]
DCUP_SHEPC1.542e-3642.25Uroporphyrinogen decarboxylase OS=Shewanella putre... [more]
DCUP_SHEDO1.542e-3642.25Uroporphyrinogen decarboxylase OS=Shewanella denit... [more]
DCUP_HAHCH1.542e-3641.58Uroporphyrinogen decarboxylase OS=Hahella chejuens... [more]
DCUP_CHLSY1.542e-3640.00Uroporphyrinogen decarboxylase OS=Chloroflexus aur... [more]
DCUP_CHLAA1.542e-3640.00Uroporphyrinogen decarboxylase OS=Chloroflexus aur... [more]
DCUP_ERWCT2.014e-3641.58Uroporphyrinogen decarboxylase OS=Erwinia carotovo... [more]
DCUP_DESPS2.376e-3641.05Uroporphyrinogen decarboxylase OS=Desulfotalea psy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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