EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_PELCD (Uroporphyrinogen decarboxylase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=hemE PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 5.860e-36
Identity = 74/189 (39.15%), Postives = 116/189 (61.38%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTV 568
            F E  +  +L  E++LQP      D  ILFSDIL P+  M    ++     PV+  P+ T A+V+ +R   PE+ VP+V + + +LR E++    ++GF GAPFTLA Y+VEG  S+HF  +KRL +  P+    L+ K T +   Y++ QA+ GAQA+Q+FDSW   LSP D++++ LPY ++++  +
Sbjct:   44 FLELCKTPELAAEVTLQPVDALGVDAAILFSDILIPIEAMGQ--NLFYRPAPVLEPPVRTAADVEALRVLQPEQDVPFVLETIRLLRRELDGRVPLIGFGGAPFTLACYMVEGAGSRHFLALKRLMYQAPETYARLMDKITDTSIVYLRAQAEAGAQALQVFDSWGGILSPADYQRYVLPYSRRLLSAL 230          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_PECCP (Uroporphyrinogen decarboxylase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=hemE PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.653e-36
Identity = 79/187 (42.25%), Postives = 115/187 (61.50%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    PI + A+V  +   DPE+ + YV  A+  +R+ +  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ F++PK LH LL K   S+  Y+  Q   GAQAV +FD+W   LS  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVNLPIPDPEQELGYVMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLHLLLDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLRYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SORC5 (Uroporphyrinogen decarboxylase OS=Sorangium cellulosum (strain So ce56) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.995e-36
Identity = 75/190 (39.47%), Postives = 122/190 (64.21%), Query Frame = 2
Query:    8 ETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVKTT 577
            E  +  +L +E++LQP  +   D  ILF+DIL PL  M  PF+  KG+GPVI +P+   A ++++R F+PEE + YV  A+ ++R+E++ +  ++GF GAPFT+ASY+VEGG S  +   K+L +S P+   AL+ K +  + + ++ Q   GAQAVQ+FDSW   LS  D+ +   P+++ I+  ++ T
Sbjct:   43 EICKTPELALEVTLQPLRLGM-DAAILFADILLPLEPMGAPFEFAKGEGPVIHEPVRDRAGIERLRVFEPEEGLGYVLDAVRLIRKELDGKTPLIGFAGAPFTMASYLVEGGKSSDYRLTKQLMWSDPEAWSALMGKISEVVRRLLRAQVAAGAQAVQLFDSWVGSLSIDDYREHVQPHVRYILRDLEAT 231          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHEFN (Uroporphyrinogen decarboxylase OS=Shewanella frigidimarina (strain NCIMB 400) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.995e-36
Identity = 78/187 (41.71%), Postives = 114/187 (60.96%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F     N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV +A++ +R E+N    ++GF G+P+TLA+Y+VEGGSSK F KIKR+A+++P  LH LL K   S+  Y+  Q  NG Q++ IFDSW   LS   + +FSL Y+++IVD
Sbjct:   46 FMSLCRNAELACEVTLQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLCIPDPEDELGYVMRAVSTIRRELNGSVPLIGFSGSPWTLATYMVEGGSSKTFEKIKRMAYAEPAALHMLLDKLADSVVLYLNAQVANGVQSLMIFDSWGGALSHHAYREFSLRYMQKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_CITK8 (Uroporphyrinogen decarboxylase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.995e-36
Identity = 77/187 (41.18%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  +  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVACKADVDKLPIPDPEDELGYVMNAVRTIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_THEYD (Uroporphyrinogen decarboxylase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.305e-35
Identity = 78/185 (42.16%), Postives = 115/185 (62.16%), Query Frame = 2
Query:   26 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVKTTP 580
            ++  E++LQP  V   D  ILFSDIL PL  M +  + I  KGP +   I T A+++ + E + E+ + +V  A+ IL  E+N    ++GF  +PFTLA+YV+EGGS+K F   KR  F +P+  H L+  FT +  KY+  Q   G  AVQIFD+WA  LSP D+E F  PY+K++++++KT P
Sbjct:   49 EIAAEVTLQPVKVLGVDAAILFSDILIPLEAMGLKIEFIDDKGPQVLPNIRTVADLEILGELNLEK-IGFVFDAIRILINELN--VPLIGFAASPFTLATYVIEGGSTKEFVNTKRFMFLEPEGFHKLMSLFTKATQKYLNEQIRAGVHAVQIFDTWAGILSPFDYESFVKPYVKRLIESLKTVP 230          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SODGM (Uroporphyrinogen decarboxylase OS=Sodalis glossinidius (strain morsitans) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.305e-35
Identity = 77/187 (41.18%), Postives = 114/187 (60.96%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F     N DL  E++LQP   F  D  ILFSDILT    M +     +G+GP    PI    +V+Q+   DPE+ + YV  A+  +R+ +     ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K   S+  Y+  Q   GAQAV +FD+W   L+  D+ +FS+ Y+ +IVD
Sbjct:   46 FMSLCRNADLACEVTLQPLRRFPLDATILFSDILTVPDAMGLGLWFEQGEGPRFARPIQHRRDVEQLPIPDPEQELGYVMNAVRAIRQRLQGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMLYAEPETLHLLLDKLADSVVLYLNGQIRAGAQAVMLFDTWGGALTGADYREFSMHYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SALNS (Uroporphyrinogen decarboxylase OS=Salmonella newport (strain SL254) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.305e-35
Identity = 77/187 (41.18%), Postives = 115/187 (61.50%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LH LL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_HAES2 (Uroporphyrinogen decarboxylase OS=Haemophilus somnus (strain 2336) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.305e-35
Identity = 77/187 (41.18%), Postives = 112/187 (59.89%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F     N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    PI+  + V  +   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +S+PK+LH LL K   ++  Y+  Q + G QAV +FD+W   L   ++  FSL Y+ +IVD
Sbjct:   46 FMSLCRNADLACEVTLQPLRRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPIDNKSAVQNLPIPDPEQELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPKILHLLLDKLADAVILYLNAQINAGVQAVMVFDTWGGVLGHREYLDFSLQYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_CHLAD (Uroporphyrinogen decarboxylase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.305e-35
Identity = 76/190 (40.00%), Postives = 114/190 (60.00%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +  +  ++  E++LQP   F  D  I+F+DIL PL G+ +     KG+GPVI +PI    +V  +   DP E+V Y   A+ +++ E+N    ++GF GAPFTLASY +EGG SK +   KR  + QP   H L+ +  T +A+Y+  Q + GA AVQIFDSWA  L+P D+  + L + + +V TV+
Sbjct:   41 FLQMVKTPEIAAEVTLQPIAAFGVDAAIIFADILPPLEGLGLRLTYEKGEGPVIHNPIRHPHDVATLHPCDPRETVAYTLDAVRLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSKEYRLTKRFMYEQPTAWHDLMERLGTLVAEYLIAQVEAGADAVQIFDSWAGTLAPADYRAYVLRHTQNVVATVR 229          
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_PELCD5.860e-3639.15Uroporphyrinogen decarboxylase OS=Pelobacter carbi... [more]
DCUP_PECCP7.653e-3642.25Uroporphyrinogen decarboxylase OS=Pectobacterium c... [more]
DCUP_SORC59.995e-3639.47Uroporphyrinogen decarboxylase OS=Sorangium cellul... [more]
DCUP_SHEFN9.995e-3641.71Uroporphyrinogen decarboxylase OS=Shewanella frigi... [more]
DCUP_CITK89.995e-3641.18Uroporphyrinogen decarboxylase OS=Citrobacter kose... [more]
DCUP_THEYD1.305e-3542.16Uroporphyrinogen decarboxylase OS=Thermodesulfovib... [more]
DCUP_SODGM1.305e-3541.18Uroporphyrinogen decarboxylase OS=Sodalis glossini... [more]
DCUP_SALNS1.305e-3541.18Uroporphyrinogen decarboxylase OS=Salmonella newpo... [more]
DCUP_HAES21.305e-3541.18Uroporphyrinogen decarboxylase OS=Haemophilus somn... [more]
DCUP_CHLAD1.305e-3540.00Uroporphyrinogen decarboxylase OS=Chloroflexus agg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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