EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SALTI (Uroporphyrinogen decarboxylase OS=Salmonella typhi GN=hemE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.705e-35
Identity = 77/187 (41.18%), Postives = 115/187 (61.50%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LH LL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SALPK (Uroporphyrinogen decarboxylase OS=Salmonella paratyphi A (strain AKU_12601) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.705e-35
Identity = 77/187 (41.18%), Postives = 115/187 (61.50%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LH LL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SALPA (Uroporphyrinogen decarboxylase OS=Salmonella paratyphi A GN=hemE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.705e-35
Identity = 77/187 (41.18%), Postives = 115/187 (61.50%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LH LL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SALG2 (Uroporphyrinogen decarboxylase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.705e-35
Identity = 77/187 (41.18%), Postives = 115/187 (61.50%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LH LL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SALEP (Uroporphyrinogen decarboxylase OS=Salmonella enteritidis PT4 (strain P125109) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.705e-35
Identity = 77/187 (41.18%), Postives = 115/187 (61.50%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LH LL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SALA4 (Uroporphyrinogen decarboxylase OS=Salmonella agona (strain SL483) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.705e-35
Identity = 77/187 (41.18%), Postives = 115/187 (61.50%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LH LL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ROSS1 (Uroporphyrinogen decarboxylase OS=Roseiflexus sp. (strain RS-1) GN=hemE PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.705e-35
Identity = 72/190 (37.89%), Postives = 118/190 (62.11%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F E  +  +L  EI++QP   F  D  I+F+DIL  L GM +     +G+GPVI +P+ + A+V  +R  DP E+V Y  +A+ +++ ++   A ++GF GAPFTLA+Y +EGGSS+     K L +++P+    L+ + T  ++ Y+  Q + GA AVQIFDSWA  L+P D+  + LP++++ +  V+
Sbjct:   42 FLEMVKTPELAAEITMQPIRAFSVDAAIIFADILPLLEGMGLHLTYEQGEGPVIHNPVRSPADVAALRTPDPRETVAYTIQAIRLVKRDLEGRAPLIGFSGAPFTLAAYAIEGGSSRDHRLTKALMYAEPQAWRELMERLTAQVSAYLIAQIEAGADAVQIFDSWAGALAPGDYADYVLPFVQKCIIAVR 231
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_DEIRA (Uroporphyrinogen decarboxylase OS=Deinococcus radiodurans GN=hemE PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.705e-35
Identity = 78/183 (42.62%), Postives = 111/183 (60.66%), Query Frame = 2 
Query:   26 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAA-VLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            DL  EI+LQP      D  ILF+DILTPL  M +  D + G GPVI +PINT  +VD +      E++PY  +++ +L  E+N+    ++GFVGAPFTLASY +EG  S+++ K KR  +++P     L+ KF + +A Y+  Q   GA AVQIFDSW   LS  D++ F  P    +++ VK
Sbjct:   50 DLAAEITLQPIKAMPLDAAILFNDILTPLPTMGLSLDFVGGVGPVIHNPINTPKDVDVLGVPATAETMPYTAESIRLLMPELNSRGIPLIGFVGAPFTLASYAIEGKGSRNYEKTKRFMYAEPAAWARLMGKFESVLADYLTEQVKAGASAVQIFDSWVGALSVYDYQTFVKPATAGLIERVK 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SALAR (Uroporphyrinogen decarboxylase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hemE PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.227e-35
Identity = 77/187 (41.18%), Postives = 114/187 (60.96%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LH LL K   S+  Y+  Q   GAQ+V IFD+W   L+  D++ FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMELGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQHFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_HAES1 (Uroporphyrinogen decarboxylase OS=Haemophilus somnus (strain 129Pt) GN=hemE PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.227e-35
Identity = 76/187 (40.64%), Postives = 111/187 (59.36%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F     N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   + V  +   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +S+PK+LH LL K   ++  Y+  Q + G QAV +FD+W   L   ++  FSL Y+ +IVD
Sbjct:   46 FMSLCRNADLACEVTLQPLRRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPVENKSAVQNLPIPDPEQELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPKILHLLLDKLADAVILYLNAQINAGVQAVMVFDTWGGVLGHREYLDFSLQYMHKIVD 232
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_SALTI1.705e-3541.18Uroporphyrinogen decarboxylase OS=Salmonella typhi... [more]
DCUP_SALPK1.705e-3541.18Uroporphyrinogen decarboxylase OS=Salmonella parat... [more]
DCUP_SALPA1.705e-3541.18Uroporphyrinogen decarboxylase OS=Salmonella parat... [more]
DCUP_SALG21.705e-3541.18Uroporphyrinogen decarboxylase OS=Salmonella galli... [more]
DCUP_SALEP1.705e-3541.18Uroporphyrinogen decarboxylase OS=Salmonella enter... [more]
DCUP_SALA41.705e-3541.18Uroporphyrinogen decarboxylase OS=Salmonella agona... [more]
DCUP_ROSS11.705e-3537.89Uroporphyrinogen decarboxylase OS=Roseiflexus sp. ... [more]
DCUP_DEIRA1.705e-3542.62Uroporphyrinogen decarboxylase OS=Deinococcus radi... [more]
DCUP_SALAR2.227e-3541.18Uroporphyrinogen decarboxylase OS=Salmonella arizo... [more]
DCUP_HAES12.227e-3540.64Uroporphyrinogen decarboxylase OS=Haemophilus somn... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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