EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_BRUC2 (Uroporphyrinogen decarboxylase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=hemE PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.643e-20
Identity = 63/190 (33.16%), Postives = 102/190 (53.68%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +   + DL VE++LQP   F  D  ILFSDIL     +       +GKGP++  PI+ D E+  +      + +  V + + ++RE++ +E  +LGF GAP+T+A+Y++ G  +   +  +  A+  P+    LL       A+Y+  Q   GA AVQIFDSW+  L    FE+F +  + +IV  V+
Sbjct:   42 FLDLCYSPDLAVEVTLQPIRRFGFDAAILFSDILVVPHALGRDLRFEEGKGPLM-TPIDAD-EIFWLETEGVAKRLEPVYETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVR 229          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_BRUAB (Uroporphyrinogen decarboxylase OS=Brucella abortus GN=hemE PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.643e-20
Identity = 63/190 (33.16%), Postives = 102/190 (53.68%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +   + DL VE++LQP   F  D  ILFSDIL     +       +GKGP++  PI+ D E+  +      + +  V + + ++RE++ +E  +LGF GAP+T+A+Y++ G  +   +  +  A+  P+    LL       A+Y+  Q   GA AVQIFDSW+  L    FE+F +  + +IV  V+
Sbjct:   42 FLDLCYSPDLAVEVTLQPIRRFGFDAAILFSDILVVPHALGRDLRFEEGKGPLM-TPIDAD-EIFWLETEGVAKRLEPVYETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVR 229          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_BRUA2 (Uroporphyrinogen decarboxylase OS=Brucella abortus (strain 2308) GN=hemE PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.643e-20
Identity = 63/190 (33.16%), Postives = 102/190 (53.68%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +   + DL VE++LQP   F  D  ILFSDIL     +       +GKGP++  PI+ D E+  +      + +  V + + ++RE++ +E  +LGF GAP+T+A+Y++ G  +   +  +  A+  P+    LL       A+Y+  Q   GA AVQIFDSW+  L    FE+F +  + +IV  V+
Sbjct:   42 FLDLCYSPDLAVEVTLQPIRRFGFDAAILFSDILVVPHALGRDLRFEEGKGPLM-TPIDAD-EIFWLETEGVAKRLEPVYETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVR 229          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_BRUA1 (Uroporphyrinogen decarboxylase OS=Brucella abortus (strain S19) GN=hemE PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.643e-20
Identity = 63/190 (33.16%), Postives = 102/190 (53.68%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +   + DL VE++LQP   F  D  ILFSDIL     +       +GKGP++  PI+ D E+  +      + +  V + + ++RE++ +E  +LGF GAP+T+A+Y++ G  +   +  +  A+  P+    LL       A+Y+  Q   GA AVQIFDSW+  L    FE+F +  + +IV  V+
Sbjct:   42 FLDLCYSPDLAVEVTLQPIRRFGFDAAILFSDILVVPHALGRDLRFEEGKGPLM-TPIDAD-EIFWLETEGVAKRLEPVYETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVR 229          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SILPO (Uroporphyrinogen decarboxylase OS=Silicibacter pomeroyi GN=hemE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.507e-20
Identity = 57/185 (30.81%), Postives = 98/185 (52.97%), Query Frame = 2
Query:   20 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            N +L  E++LQP   +  D  ILF+DIL     +        G+GP +   I   A+ D+++  D   E++  + + + IL  E+ +E A++GF GAP+T+A+Y++ G  +        L    P +  AL+ + T +  +Y+  Q + GA+ V+IFDSWA  L    F K++L   ++I   +K
Sbjct:   50 NPELAAEVTLQPIRRYGFDAAILFADILLVPQALGADLWFETGEGPRL-STIGAQADFDRLKPVDAIHETLSPIYETVRILTRELPSETALIGFAGAPWTVATYMIAGRGTPDQGPAHALREGNPALFDALIARLTAATIEYLSAQIEAGAEVVKIFDSWAGSLKGEAFTKYALEPCREITQALK 233          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RHOP2 (Uroporphyrinogen decarboxylase OS=Rhodopseudomonas palustris (strain HaA2) GN=hemE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.507e-20
Identity = 66/201 (32.84%), Postives = 107/201 (53.23%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTV-KTTPS*SLI 595
            F +   N  L  E++LQP   F  D  I+FSDIL  P + G  + F++  G+GP + DP+N+   V  +        +  V +AL I+R E+  E  ++GF GAPFT+A+Y+V G  +      + +A+  P     ++     S  +Y+  Q + GA  +QIFD+W   L P +FEK+ +   ++IV+ V K +P   +I
Sbjct:   47 FLDLCFNAKLAAEVTLQPIRRFGFDAAIIFSDILVVPYALGRAVRFEV--GEGPRL-DPLNSPDLVGTLNGAIDLSKLEPVFEALRIVRSELAPETTLIGFCGAPFTVATYMVAGQGTSDQHPARLMAYQHPGAFARIIDVLVESSIQYLLKQLEAGADVLQIFDTWGGILPPREFEKWCIEPTRRIVEGVRKVSPGAKII 244          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ERYLH (Uroporphyrinogen decarboxylase OS=Erythrobacter litoralis (strain HTCC2594) GN=hemE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.887e-20
Identity = 61/190 (32.11%), Postives = 102/190 (53.68%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F E   + +   E++LQP   F  DG ILFSDIL     +    + + G+GP +  P   DAE++ +      E +  + + +  +R  ++ E  +LGF G+P+T+A+Y+V G  S+     + +A++ P  L A++        +Y+  Q D GA+AVQ+FDSWA  L+P  FE++ +     IV  +K
Sbjct:   42 FLELVYDSEAAREVTLQPIRRFGFDGAILFSDILIVPHALGQKLEFLAGEGPHL-SPRLADAELEALSTVP--ERLDAIYETVRQVRAALDPETTLLGFAGSPWTVATYMVAGEGSRDQQAARSMAYTDPGKLQAIVDAIIDLTVEYLVGQIDAGAEAVQLFDSWAGSLAPDQFERWVIAPNAAIVRRLK 228          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SILST (Uroporphyrinogen decarboxylase OS=Silicibacter sp. (strain TM1040) GN=hemE PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.004e-19
Identity = 58/185 (31.35%), Postives = 98/185 (52.97%), Query Frame = 2
Query:   20 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREF-DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            N +L  E++LQP   +  D  ILF+DIL     +      + G+GP +   I TDA+  ++    D  E++  + + + IL +E+ +E  ++GF GAP+T+A+Y++ G  +        L      +  ALL + T +   Y+  Q + GA+ V+IFDSWA  L    F+K++L   +QI   +K
Sbjct:   50 NPELAAEVTLQPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRL-STITTDADFAKLGPASDVHETLSPIYETVRILSKELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALMQENTPLFEALLARITEATISYLSAQIEAGAEVVKIFDSWAGSLKGEAFDKYALEPARQITAALK 233          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SPHWW (Uroporphyrinogen decarboxylase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=hemE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.713e-19
Identity = 63/188 (33.51%), Postives = 96/188 (51.06%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPI--NTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIV 559
            F E + + D   EI+LQP   F  DG ILFSDIL     M        G+GP +   +   T A+++ V    P    P  G    + R  +  E   LGF G+P+T+A+Y+V G  S+  ++ +R A+  P    A++     + A Y+  Q + G  AVQ+FDSWA  L+P +FE++ +    Q+V
Sbjct:   48 FLELAYDSDAAAEITLQPIRRFGFDGAILFSDILIIPHAMGQDLRFEAGEGPRLSPTLVDRTLADLEPV----PARLEPIYGTVRRV-RAALPAETTFLGFAGSPWTVATYMVAGQGSREQAETRRKAYRDPAGFQAIIDALVDATADYLSKQIEAGVDAVQLFDSWAGSLAPREFERWVIAPTAQLV 230          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RHOPS (Uroporphyrinogen decarboxylase OS=Rhodopseudomonas palustris (strain BisB5) GN=hemE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.713e-19
Identity = 63/192 (32.81%), Postives = 103/192 (53.65%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILT-PLS-GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +   N  L  E++LQP   F  D  I+FSDIL  P + G  + F++  G+GP + DP+N+   V  +        +  V +AL I+R E+  E  ++GF GAPFT+A+Y+V G  +      + +A+  P     ++     S  +Y+  Q + GA  +QIFD+W   L P +FEK+ +   ++IV+ V+
Sbjct:   47 FLDLCFNPKLAAEVTLQPIRRFGFDAAIIFSDILVVPYALGRAVRFEV--GEGPRL-DPLNSPDLVGTLNGAIDLGKLEPVFEALRIVRSELAPETTLIGFCGAPFTVATYMVAGQGTSDQHPARLMAYQHPGAFAKIIDVLVESSIQYLLKQLEAGADVLQIFDTWGGILPPREFEKWCIEPTRRIVEGVR 235          
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_BRUC22.643e-2033.16Uroporphyrinogen decarboxylase OS=Brucella canis (... [more]
DCUP_BRUAB2.643e-2033.16Uroporphyrinogen decarboxylase OS=Brucella abortus... [more]
DCUP_BRUA22.643e-2033.16Uroporphyrinogen decarboxylase OS=Brucella abortus... [more]
DCUP_BRUA12.643e-2033.16Uroporphyrinogen decarboxylase OS=Brucella abortus... [more]
DCUP_SILPO4.507e-2030.81Uroporphyrinogen decarboxylase OS=Silicibacter pom... [more]
DCUP_RHOP24.507e-2032.84Uroporphyrinogen decarboxylase OS=Rhodopseudomonas... [more]
DCUP_ERYLH5.887e-2032.11Uroporphyrinogen decarboxylase OS=Erythrobacter li... [more]
DCUP_SILST1.004e-1931.35Uroporphyrinogen decarboxylase OS=Silicibacter sp.... [more]
DCUP_SPHWW1.713e-1933.51Uroporphyrinogen decarboxylase OS=Sphingomonas wit... [more]
DCUP_RHOPS1.713e-1932.81Uroporphyrinogen decarboxylase OS=Rhodopseudomonas... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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