EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RHOS1 (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=hemE PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.510e-18
Identity = 55/182 (30.22%), Postives = 90/182 (49.45%), Query Frame = 2
Query:   26 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            DL  E++LQP   +  D  ILF+DIL     +        G+GP +    + +         D  E++  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +L  +      AL+ + T +  +Y+  Q + G + V++FDSWA  L   DFE F++   K+IV  +K
Sbjct:   50 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMEGVTALKGRDDIHETLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVTEATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELK 231          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RHOS5 (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=hemE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.399e-18
Identity = 57/185 (30.81%), Postives = 94/185 (50.81%), Query Frame = 2
Query:   20 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            N +L  E++LQP   +  D  ILF+DIL     +        G+GP +   I   A V+ ++  D   E +  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +L  +      AL+ + T +  +Y+  Q + G + V++FDSWA  L   DFE F++   K+I+  +K
Sbjct:   48 NPELAAEVTLQPIRRYGFDAAILFADILLLPQALGADLWFETGEGPRM-STITDMAGVEALKGKDEIHEKLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRITEATIEYLSKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKKIIAELK 231          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RHOSK (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=hemE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.227e-17
Identity = 58/183 (31.69%), Postives = 93/183 (50.82%), Query Frame = 2
Query:   26 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            DL  E++LQP   +  D  ILF+DIL     +        G+GP +   I   A V  ++  D   E++  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +L  +      AL+ + T +  +Y+  Q + G + V++FDSWA  L   DFE F++   K+IV  +K
Sbjct:   50 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGADLWFETGEGPRM-STITDMAGVTALKGRDDIHETLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVTEATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELK 231          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RHOS4 (Uroporphyrinogen decarboxylase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=hemE PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.227e-17
Identity = 58/183 (31.69%), Postives = 93/183 (50.82%), Query Frame = 2
Query:   26 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            DL  E++LQP   +  D  ILF+DIL     +        G+GP +   I   A V  ++  D   E++  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +L  +      AL+ + T +  +Y+  Q + G + V++FDSWA  L   DFE F++   K+IV  +K
Sbjct:   50 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGADLWFETGEGPRM-STITDMAGVTALKGRDDIHETLAPVYETCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVTEATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELK 231          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_CHLCV (Uroporphyrinogen decarboxylase OS=Chlamydophila caviae GN=hemE PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.227e-17
Identity = 56/184 (30.43%), Postives = 95/184 (51.63%), Query Frame = 2
Query:   20 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            N + + E +L    + K D  ILF+DIL+ L G NI +D   G   + F P       + +   DP+E+  Y+ +A+  L + +  +  ++ F  +PFT+ASY+++GG+SK F K     +  P    ALL+K T     Y++ Q   GA A+Q+F+S +  L    F ++      Q++  +K
Sbjct:   45 NTEAITEATLLGPSLLKVDAAILFADILSLLDGFNISYDFSPGP-QISFSPYE-----ELIFTKDPQETFSYLLQAIKNLVKAL--DVPLIAFAASPFTMASYLLDGGASKDFPKTMAFLYQYPDKFDALLKKLTEGTVIYLKEQIHAGAAAIQLFESSSLRLPSELFSRYVTAPNTQLISQLK 220          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RICTY (Uroporphyrinogen decarboxylase OS=Rickettsia typhi GN=hemE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.603e-17
Identity = 60/197 (30.46%), Postives = 102/197 (51.78%), Query Frame = 2
Query:    5 RETSEN-------VDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVD-QVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            RET++N       V+   E++LQP   +  D  I+FSDIL   S +    D  +  GPV+       ++ D Q  + D    +  V K +  ++E++ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A Y+  QA +GA  ++IFDSW+  L+  DF +F +   K+I+  VK
Sbjct:   33 RETTKNFLDFCFDVNKATEVTLQPIRRYGLDAAIIFSDILVLPSALGWEVDFKENIGPVLKQ---FKSQKDFQYLQRDSNNKLENVFKIIKKVKEKLPSNTSLIGFAGSPWTVMSYMLEGKGKRDFITSKKFVYENKILAKDLLNFITEKTADYLINQAKSGADILKIFDSWSGVLAEDDFTEFVIEPTKKIILKVK 226          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_CHLAB (Uroporphyrinogen decarboxylase OS=Chlamydophila abortus GN=hemE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.603e-17
Identity = 55/188 (29.26%), Postives = 98/188 (52.13%), Query Frame = 2
Query:   20 NVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVKTTPS 583
            N + + E +L    + K D  ILF+DIL+ L G NI +D   G   + F P     + + +   DP+++  Y+ KA+  L + ++    ++ F  +PFT+A Y++EGG+SK F K     +  P+   ALL++   +   Y++ Q   GA A+Q+F+S +  L    F ++      Q++  +K + S
Sbjct:   45 NTEAITEATLLGPSLLKVDAAILFADILSLLDGFNISYDFAPGP-QISFSP-----KEELIFTNDPQDTFSYLLKAIKNLVKRLS--VPLIAFAASPFTMACYLLEGGASKDFPKTMAFLYQHPERFDALLKQLAEATVIYLKEQIQAGASAIQLFESSSLRLPSALFSRYVTRPNTQLITQLKNSVS 224          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_NEOSM (Uroporphyrinogen decarboxylase OS=Neorickettsia sennetsu (strain Miyayama) GN=hemE PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.357e-16
Identity = 57/190 (30.00%), Postives = 97/190 (51.05%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP-EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTV 568
            F +  E+ ++  EI+LQP   F  D  I+FSDIL     +    DI K  GPVI + IN    +     +D  EE +      + I R+ +    +++GF G P+T+A Y++EGG  K F + K     +      ++   T +  +Y+  Q  +GA  +QIF+S+A   S  +F++F +   ++IV ++
Sbjct:   32 FFQMCESPEIASEITLQPIKRFDLDAAIVFSDILVLPRALGCNIDIKKSTGPVI-ERINNPNWLT----YDAFEEKISPTLNTIAITRKSLPQNKSLIGFAGGPWTVALYIIEGGWDKTFLRTKEFINKRYHEFKEIISILTDATIQYLNKQLKHGADFIQIFESFAWAASSNEFKEFIVEPTRRIVSSI 216          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_PARDP (Uroporphyrinogen decarboxylase OS=Paracoccus denitrificans (strain Pd 1222) GN=hemE PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.315e-16
Identity = 53/186 (28.49%), Postives = 92/186 (49.46%), Query Frame = 2
Query:   26 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDP----EESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            DL  E++LQP   +  D  ILF+DIL     + +    + G+GP     ++T      V    P     +++  V + + IL  E+  E  ++GF GAP+T+A+Y+V G  +   +              AL+ + T +   Y+  Q + GA+ V++FDSWA  L   DF+ F++   ++I+  +K
Sbjct:   51 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGLDLWFVTGEGP----RLSTVTSAAGVAALKPAAAIHDTLSPVYETVRILARELPRETTLIGFAGAPWTVATYMVAGRGTPDQAPAHAFKAEDRAAFAALIDRITEATIDYLSAQIEAGAEVVKLFDSWAGSLKGRDFDDFAVEPARRIIAALK 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ACICJ (Uroporphyrinogen decarboxylase OS=Acidiphilium cryptum (strain JF-5) GN=hemE PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.315e-16
Identity = 54/181 (29.83%), Postives = 95/181 (52.49%), Query Frame = 2
Query:   29 LVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            L  E++LQP   F  D  ILFSDIL     +       +G+GP + + I+  A ++ +      +    V + ++ +R E+  E  ++GF G+PFT+A Y+++G     F   + +A++ P +L A++   TT+   Y+ +Q + GA  V +FDSWA  L P  F    +    +IV+ ++
Sbjct:   56 LATEVTLQPVRRFGMDAAILFSDILILPWALGQKLRFAEGEGPRL-ERIDGLAGLEALDPAALRQGTEPVMETVSRVRAELPPETTLIGFAGSPFTVACYMIDGRGGD-FPLTREVAYADPALLAAVIETVTTATIDYLSWQIEAGADCVMLFDSWAGLLPPDLFRAHVIHPTARIVEQLR 234          
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_RHOS15.510e-1830.22Uroporphyrinogen decarboxylase OS=Rhodobacter spha... [more]
DCUP_RHOS59.399e-1830.81Uroporphyrinogen decarboxylase OS=Rhodobacter spha... [more]
DCUP_RHOSK1.227e-1731.69Uroporphyrinogen decarboxylase OS=Rhodobacter spha... [more]
DCUP_RHOS41.227e-1731.69Uroporphyrinogen decarboxylase OS=Rhodobacter spha... [more]
DCUP_CHLCV1.227e-1730.43Uroporphyrinogen decarboxylase OS=Chlamydophila ca... [more]
DCUP_RICTY1.603e-1730.46Uroporphyrinogen decarboxylase OS=Rickettsia typhi... [more]
DCUP_CHLAB1.603e-1729.26Uroporphyrinogen decarboxylase OS=Chlamydophila ab... [more]
DCUP_NEOSM1.357e-1630.00Uroporphyrinogen decarboxylase OS=Neorickettsia se... [more]
DCUP_PARDP2.315e-1628.49Uroporphyrinogen decarboxylase OS=Paracoccus denit... [more]
DCUP_ACICJ2.315e-1629.83Uroporphyrinogen decarboxylase OS=Acidiphilium cry... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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