EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RICPR (Uroporphyrinogen decarboxylase OS=Rickettsia prowazekii GN=hemE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.736e-16
Identity = 56/197 (28.43%), Postives = 100/197 (50.76%), Query Frame = 2
Query:    5 RETSEN-------VDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVD-QVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            RET++N       V+   E++LQP   +  D  I+FSDIL   + +    D  +  GPV+       ++ D Q  + D    +  V K +  ++E++ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   + Y+  Q  +G   ++IFDSW+  L+  DF +F +   K+I+  VK
Sbjct:   33 RETTKNFLDFCYDVNKATEVTLQPIRRYGLDAAIIFSDILVLPNALGWEVDFKENIGPVLKQ---FKSQKDFQYLQRDSNNKLEKVYKIIKKVKEKLPSNTSLIGFAGSPWTVMSYMLEGKGKRDFRTSKKFIYENKILAKDLLNFITEKTSDYLINQVKSGVDLLKIFDSWSGVLAEDDFTEFVIEPTKKIILKVK 226          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RICBR (Uroporphyrinogen decarboxylase OS=Rickettsia bellii (strain RML369-C) GN=hemE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.736e-16
Identity = 56/191 (29.32%), Postives = 94/191 (49.21%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFD-PINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F E   +VD   E++LQP   F  D  I+FSDIL     +    D  +  GP++       D +  Q    D  E V  + K +   R+E+    +++GF G+P+T+ +Y++EG   + F   K+  +    +   LL   T     ++  Q  +GA  ++IFDSWA  L   +F+KF +   K+I+ ++K
Sbjct:   40 FLEFCYDVDKATEVTLQPIKRFGFDAAIIFSDILVLPHALGWEVDFKENIGPLLKQFKSKEDFKYLQDNSNDKLEKVYEIVKKV---RKELPKSTSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQIKSGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIK 227          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RICB8 (Uroporphyrinogen decarboxylase OS=Rickettsia bellii (strain OSU 85-389) GN=hemE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.736e-16
Identity = 56/191 (29.32%), Postives = 94/191 (49.21%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFD-PINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F E   +VD   E++LQP   F  D  I+FSDIL     +    D  +  GP++       D +  Q    D  E V  + K +   R+E+    +++GF G+P+T+ +Y++EG   + F   K+  +    +   LL   T     ++  Q  +GA  ++IFDSWA  L   +F+KF +   K+I+ ++K
Sbjct:   40 FLEFCYDVDKATEVTLQPIKRFGFDAAIIFSDILVLPHALGWEVDFKENIGPLLKQFKSKEDFKYLQDNSNDKLEKVYEIVKKV---RKELPKSTSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQIKSGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIK 227          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RHOCA (Uroporphyrinogen decarboxylase OS=Rhodobacter capsulatus GN=hemE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.736e-16
Identity = 51/182 (28.02%), Postives = 87/182 (47.80%), Query Frame = 2
Query:   26 DLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            DL  E++LQP   +  D  ILF+DIL     + +      G+GP +    + +       + D  + +  V +   IL  E+  E   +GF G P+T+A+Y++ G  SK  +   +   +      AL+   T +  +Y+  Q + G + V++FDSWA  L   DFE F++   + I   +K
Sbjct:   51 DLAAEVTLQPIRRYGFDAAILFADILLLPQALGLDLWFETGEGPRMSTVTSMEGVKGLKGKDDIHDKLAPVYETCKILSRELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKFKDTDRAAFSALIDAVTVATIEYLSKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVEPARVITAEMK 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_HYPNA (Uroporphyrinogen decarboxylase OS=Hyphomonas neptunium (strain ATCC 15444) GN=hemE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.736e-16
Identity = 51/177 (28.81%), Postives = 94/177 (53.11%), Query Frame = 2
Query:   29 LVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIV 559
            L  E +LQP   +  DG ILF+DIL  L  M +     KG+GP++ + IN  +++ +V      + +  V + ++ ++  +  +  ++GF G+P+T++ Y +EG      S   R A  +P  L A++     + A+Y+  Q + GA+A+ +FDSWA  L    F +  +   +++V
Sbjct:   54 LASEATLQPIRRYGMDGAILFADILLILDAMGLKVAFEKGEGPLV-EQINGPSDLARVSPQKAADRLSPVYETVSRVKAALPAQTTLIGFAGSPWTVSLYAIEGRGKTDKSTAWRWAHGRPDDLAAVMDLVAEATAEYLARQVEAGAEALMLFDSWAEGLPDNIFREVVIAPTRKLV 229          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RICRS (Uroporphyrinogen decarboxylase OS=Rickettsia rickettsii (strain Sheila Smith) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.797e-16
Identity = 54/196 (27.55%), Postives = 99/196 (50.51%), Query Frame = 2
Query:    5 RETSEN-------VDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            RET++N       V    E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L+  +F KF +   K+I+  VK
Sbjct:   34 RETTKNFLDFCYDVSKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNYKLEKVYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLNFITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTKFVIEPTKKIILKVK 227          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RICRO (Uroporphyrinogen decarboxylase OS=Rickettsia rickettsii (strain Iowa) GN=hemE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.797e-16
Identity = 54/196 (27.55%), Postives = 99/196 (50.51%), Query Frame = 2
Query:    5 RETSEN-------VDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            RET++N       V    E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L+  +F KF +   K+I+  VK
Sbjct:   34 RETTKNFLDFCYDVSKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNYKLEKVYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLNFITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTKFVIEPTKKIILKVK 227          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RICFE (Uroporphyrinogen decarboxylase OS=Rickettsia felis GN=hemE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.501e-15
Identity = 51/190 (26.84%), Postives = 96/190 (50.53%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            F +   +V+   E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  ++EE+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L   +F +F +   K+I+  VK
Sbjct:   40 FLDFCYDVNKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQSNPNNKLEKVYEIIKKVKEELPSTTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAKELLNFITEKTADHLVNQAKSGADVLKLFDSWSGVLGEEEFTEFVIEPTKKIILKVK 227          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RICPU (Uroporphyrinogen decarboxylase OS=Rickettsia peacockii (strain Rustic) GN=hemE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.960e-15
Identity = 54/196 (27.55%), Postives = 99/196 (50.51%), Query Frame = 2
Query:    5 RETSEN-------VDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            RET++N       V    E++LQP   +  D  I+FSDIL     +    D  +  GP++        E  +  + +P   +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +GA  +++FDSW+  L+  +F +F +   K+IV  VK
Sbjct:   34 RETTKNFLDFCYDVSKATEVTLQPIKRYGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNYKLEKVYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLNFITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVK 227          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_RICM5 (Uroporphyrinogen decarboxylase OS=Rickettsia massiliae (strain Mtu5) GN=hemE PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.960e-15
Identity = 53/196 (27.04%), Postives = 99/196 (50.51%), Query Frame = 2
Query:    5 RETSEN-------VDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            RET++N       V+   E++LQP   +  D  I+FSDIL          D  +  GP++        E  +  + +P + +  V + +  +++E+ +  +++GF G+P+T+ SY++EG   + F   K+  +    +   LL   T   A ++  QA +G   +++FDSW+  L+  +F +F +   K+IV  VK
Sbjct:   34 RETTKNFLDFCYDVNKATEVTLQPIKRYGFDAAIIFSDILVLPHAFGWEVDFKENIGPILKQ--FKSQEDFKYLQINPNDKLEKVYEIIKKVKKELPSPTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLNFITEKTADHLINQAKSGVDVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVK 227          
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_RICPR6.736e-1628.43Uroporphyrinogen decarboxylase OS=Rickettsia prowa... [more]
DCUP_RICBR6.736e-1629.32Uroporphyrinogen decarboxylase OS=Rickettsia belli... [more]
DCUP_RICB86.736e-1629.32Uroporphyrinogen decarboxylase OS=Rickettsia belli... [more]
DCUP_RHOCA6.736e-1628.02Uroporphyrinogen decarboxylase OS=Rhodobacter caps... [more]
DCUP_HYPNA6.736e-1628.81Uroporphyrinogen decarboxylase OS=Hyphomonas neptu... [more]
DCUP_RICRS8.797e-1627.55Uroporphyrinogen decarboxylase OS=Rickettsia ricke... [more]
DCUP_RICRO8.797e-1627.55Uroporphyrinogen decarboxylase OS=Rickettsia ricke... [more]
DCUP_RICFE1.501e-1526.84Uroporphyrinogen decarboxylase OS=Rickettsia felis... [more]
DCUP_RICPU1.960e-1527.55Uroporphyrinogen decarboxylase OS=Rickettsia peaco... [more]
DCUP_RICM51.960e-1527.04Uroporphyrinogen decarboxylase OS=Rickettsia massi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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