EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_VIBHB (Uroporphyrinogen decarboxylase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hemE PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.810e-38
Identity = 79/187 (42.25%), Postives = 119/187 (63.64%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GPV   PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+  FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSL (Uroporphyrinogen decarboxylase OS=Geobacter sulfurreducens GN=hemE PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.810e-38
Identity = 81/187 (43.32%), Postives = 117/187 (62.57%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F E  +  +L  E+++QP  +   D  ILFSDILTP+  M +  D + G  PV   P+ T A+V+++R  +PEE VPYV   + ILR E+     ++GF GAPFTLA Y+VEG  SK ++ IKR+ ++ P V  AL+ K T    +Y+  Q   GAQA+QIFD+W   LSP D+EK+ LPY  ++++
Sbjct:   41 FLELCKTPELAAEVTIQPIDILNVDAAILFSDILTPVEPMGLKLDFVPG--PVFEHPVRTMADVEKLRIPNPEEDVPYVLDTIKILRRELAGRVPLIGFGGAPFTLACYMVEGKGSKDWANIKRMMYAAPDVYAALMDKVTMMDMEYLNAQIKAGAQAIQIFDTWGGVLSPTDYEKYVLPYTTKLIN 225          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_VIBPA (Uroporphyrinogen decarboxylase OS=Vibrio parahaemolyticus GN=hemE PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.670e-38
Identity = 79/187 (42.25%), Postives = 119/187 (63.64%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GPV  +PI   A+V+++   DPE  + YV  A+  +R+++N +  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K   S+  Y+  Q   GAQ+V +FD+W   L+P D+  FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIDYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_THET8 (Uroporphyrinogen decarboxylase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=hemE PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.670e-38
Identity = 73/188 (38.83%), Postives = 122/188 (64.89%), Query Frame = 2
Query:    8 ETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            E  +N ++  E++L P      D  ILF+DI TPL GM +   +++ KGPVI +P+  +  V+ +R   PEE+VP+V + + IL+ E+     ++GF GAPFTLASY+VEGG S+ F ++K L + +  + H L+ K T +MA+Y++ QA+ GA  +Q+FDSW   LSP D+ ++  P+++++  +++
Sbjct:   46 EIVQNPEVCAEVTLLPVKALGVDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRPLVPEEAVPFVLETIRILKREL--PVPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWHRLMEKLTEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLR 231          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_THET2 (Uroporphyrinogen decarboxylase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=hemE PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 3.670e-38
Identity = 73/188 (38.83%), Postives = 122/188 (64.89%), Query Frame = 2
Query:    8 ETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTVK 571
            E  +N ++  E++L P      D  ILF+DI TPL GM +   +++ KGPVI +P+  +  V+ +R   PEE+VP+V + + IL+ E+     ++GF GAPFTLASY+VEGG S+ F ++K L + +  + H L+ K T +MA+Y++ QA+ GA  +Q+FDSW   LSP D+ ++  P+++++  +++
Sbjct:   46 EIVQNPEVCAEVTLLPVKALGVDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRPLVPEEAVPFVLETIRILKREL--PVPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWHRLMEKLTEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLR 231          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_PSEHT (Uroporphyrinogen decarboxylase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=hemE PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.670e-38
Identity = 79/187 (42.25%), Postives = 118/187 (63.10%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F     N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    PI++ ++V ++ + DP + + YV  A++ +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F KIK++AF++P+ LH LL K   S+  Y+  Q   GAQ++ +FDSW   LSP D+ +FSL Y+ +IVD
Sbjct:   46 FMSLCRNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLSDVKKIPKLDPNDDLGYVMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEPQTLHLLLDKLADSVIDYLNAQIKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_GEOSF (Uroporphyrinogen decarboxylase OS=Geobacter sp. (strain FRC-32) GN=hemE PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.794e-38
Identity = 82/187 (43.85%), Postives = 119/187 (63.64%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F E  +  +L  E+++QP  +   D  ILFSDILTP+  M +  D + G  PV   PI T A+V+++R    E+ VPYV + + ILR E+ N+  ++GF GAPFTLA Y+VEG  SK ++ IKR+ ++ P+V  AL+ K T    +Y+  Q   GAQA+QIFD+W   LSP D+EKF LPY  ++++
Sbjct:   41 FLELCKTPELAAEVTIQPVDILGVDAAILFSDILTPVEPMGMALDFVPG--PVFEHPIRTMADVEKLRIPQMEQDVPYVLETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVYAALMEKVTMMDMEYLNAQIKAGAQAIQIFDTWGGVLSPSDYEKFVLPYTTKLIN 225          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ACTP7 (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=hemE PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.794e-38
Identity = 81/187 (43.32%), Postives = 115/187 (61.50%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F     N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    PI   A+VD +   DPE  + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ ++ PK+LHALL K   S+  Y+  Q   GAQAV +FD+W   L+  ++++FSL Y+ +IVD
Sbjct:   46 FMALCRNADLACEVTLQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ACTP2 (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=hemE PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.794e-38
Identity = 81/187 (43.32%), Postives = 115/187 (61.50%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F     N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    PI   A+VD +   DPE  + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ ++ PK+LHALL K   S+  Y+  Q   GAQAV +FD+W   L+  ++++FSL Y+ +IVD
Sbjct:   46 FMALCRNADLACEVTLQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_PSYIN (Uroporphyrinogen decarboxylase OS=Psychromonas ingrahamii (strain 37) GN=hemE PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 6.261e-38
Identity = 81/186 (43.55%), Postives = 114/186 (61.29%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIV 559
            F     N DL  E++LQP   F  D  ILFSDILT    M +     +G+GP +  PI    +VD +   DPE  + YV  A+  +R E+     ++GF G+P+TLA+Y+VEGGSSK F+KIK++AF +P++LH LL K   S+  Y+  Q   GAQ+V +FD+W   LSP D++ FSL Y+ +IV
Sbjct:   46 FMSLCRNADLACEVTLQPLRRFDLDAAILFSDILTIPDAMGLGLYFAEGEGPKLKRPITCKKDVDNLIMPDPEGELQYVMNAVRTIRRELKGSVPLIGFAGSPWTLATYMVEGGSSKAFTKIKKMAFCEPQLLHTLLDKLADSVIDYLNAQIAAGAQSVMVFDTWGGVLSPRDYKDFSLQYMTKIV 231          
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_VIBHB2.810e-3842.25Uroporphyrinogen decarboxylase OS=Vibrio harveyi (... [more]
DCUP_GEOSL2.810e-3843.32Uroporphyrinogen decarboxylase OS=Geobacter sulfur... [more]
DCUP_VIBPA3.670e-3842.25Uroporphyrinogen decarboxylase OS=Vibrio parahaemo... [more]
DCUP_THET83.670e-3838.83Uroporphyrinogen decarboxylase OS=Thermus thermoph... [more]
DCUP_THET23.670e-3838.83Uroporphyrinogen decarboxylase OS=Thermus thermoph... [more]
DCUP_PSEHT3.670e-3842.25Uroporphyrinogen decarboxylase OS=Pseudoalteromona... [more]
DCUP_GEOSF4.794e-3843.85Uroporphyrinogen decarboxylase OS=Geobacter sp. (s... [more]
DCUP_ACTP74.794e-3843.32Uroporphyrinogen decarboxylase OS=Actinobacillus p... [more]
DCUP_ACTP24.794e-3843.32Uroporphyrinogen decarboxylase OS=Actinobacillus p... [more]
DCUP_PSYIN6.261e-3843.55Uroporphyrinogen decarboxylase OS=Psychromonas ing... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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