EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SERP5 (Uroporphyrinogen decarboxylase OS=Serratia proteamaculans (strain 568) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.822e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI + A+VD++  FDPE  + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+K+K++ +++P  LH LL K   S+  Y+  Q   GAQ+V +FD+W   L+  D+ +FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITSRADVDKLPAFDPEVELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPATLHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_PHOPR (Uroporphyrinogen decarboxylase OS=Photobacterium profundum GN=hemE PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.379e-37
Identity = 79/187 (42.25%), Postives = 117/187 (62.57%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P  LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+ +FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDKLADSVVEYLNAQIKAGAQSVMVFDTWGGVLTPSDYNEFSLRYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_GEOUR (Uroporphyrinogen decarboxylase OS=Geobacter uraniireducens (strain Rf4) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.379e-37
Identity = 80/187 (42.78%), Postives = 119/187 (63.64%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F E  +  +L  E+S+QP  +   D  ILFSDILTP+  M +  D + G  PV   PI T A+V+++R    E+ VPYV + + ILR E+ N+  ++GF GAPFTLA Y+VEG  SK ++ +KR+ ++ P+V  AL+ K T    +Y+  Q   GAQA+QIFD+W   L+P D+EK+ LPY  ++++
Sbjct:   41 FLELCKTPELAAEVSIQPVDILGVDAAILFSDILTPVEPMGMALDFVPG--PVFEHPIRTMADVEKLRIPQMEQDVPYVLETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATMKRMMYAAPEVYAALMEKVTMMDMEYLNAQIKAGAQAIQIFDTWGGVLAPSDYEKYVLPYTTKLIN 225
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ACTPJ (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=hemE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.379e-37
Identity = 80/187 (42.78%), Postives = 114/187 (60.96%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F     N DL  E++LQP   +  D  ILFSDILT    M +      G+GP    PI   A+VD +   DPE  + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ ++ P++LHALL K   S+  Y+  Q   GAQAV +FD+W   L+  +++ FSL Y+ +IVD
Sbjct:   46 FMALCRNADLACEVTLQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQILHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKAFSLRYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECO5E (Uroporphyrinogen decarboxylase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.107e-37
Identity = 80/187 (42.78%), Postives = 117/187 (62.57%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+A Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVALYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECO57 (Uroporphyrinogen decarboxylase OS=Escherichia coli O157:H7 GN=hemE PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.107e-37
Identity = 80/187 (42.78%), Postives = 117/187 (62.57%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+A Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVALYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_VIBFM (Uroporphyrinogen decarboxylase OS=Vibrio fischeri (strain MJ11) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.058e-37
Identity = 79/187 (42.25%), Postives = 117/187 (62.57%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P  LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+ +FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_VIBF1 (Uroporphyrinogen decarboxylase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.058e-37
Identity = 79/187 (42.25%), Postives = 117/187 (62.57%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P  LH LL K   S+ +Y+  Q   GAQ+V +FD+W   L+P D+ +FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIGLPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHESR (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain MR-7) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.058e-37
Identity = 79/187 (42.25%), Postives = 118/187 (63.10%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + +FSL Y+++IVD
Sbjct:   46 FMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHESM (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain MR-4) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.058e-37
Identity = 79/187 (42.25%), Postives = 118/187 (63.10%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + +FSL Y+++IVD
Sbjct:   46 FMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVD 232
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_SERP51.822e-3742.25Uroporphyrinogen decarboxylase OS=Serratia proteam... [more]
DCUP_PHOPR2.379e-3742.25Uroporphyrinogen decarboxylase OS=Photobacterium p... [more]
DCUP_GEOUR2.379e-3742.78Uroporphyrinogen decarboxylase OS=Geobacter uranii... [more]
DCUP_ACTPJ2.379e-3742.78Uroporphyrinogen decarboxylase OS=Actinobacillus p... [more]
DCUP_ECO5E3.107e-3742.78Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO573.107e-3742.78Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_VIBFM4.058e-3742.25Uroporphyrinogen decarboxylase OS=Vibrio fischeri ... [more]
DCUP_VIBF14.058e-3742.25Uroporphyrinogen decarboxylase OS=Vibrio fischeri ... [more]
DCUP_SHESR4.058e-3742.25Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]
DCUP_SHESM4.058e-3742.25Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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