EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHESA (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain ANA-3) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.058e-37
Identity = 79/187 (42.25%), Postives = 118/187 (63.10%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + +FSL Y+++IVD
Sbjct:   46 FMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_KLEP3 (Uroporphyrinogen decarboxylase OS=Klebsiella pneumoniae (strain 342) GN=hemE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.058e-37
Identity = 79/187 (42.25%), Postives = 118/187 (63.10%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    PI + A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ +++P+ LHALL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPIKSKADVDKLPIPDPEQELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALHALLEKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHEON (Uroporphyrinogen decarboxylase OS=Shewanella oneidensis GN=hemE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.300e-37
Identity = 79/187 (42.25%), Postives = 118/187 (63.10%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   ++ D  ILFSDILT    M +      G+GP    P +T   + ++   DPE+ + YV KA++ +R E+N +  ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P  LH LL K   S+  Y+  Q  NGAQ++ IFDSW   LS   + +FSL Y+++IVD
Sbjct:   46 FMSLCKNHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ALISL (Uroporphyrinogen decarboxylase OS=Aliivibrio salmonicida (strain LFI1238) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.922e-37
Identity = 78/189 (41.27%), Postives = 118/189 (62.43%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVDTV 568
            F    +N  L  E++LQP   F  D  ILFSDILT    M +      G+GP    PI   A+VD++   DPE  + YV  A+  +R+++  E  ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P +LH LL K   ++ +Y+  Q   GAQ+V +FD+W   L+P D+ +FSL Y+ +IVD +
Sbjct:   46 FMSLCKNAGLASEVTLQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPAILHLLLDKLADTVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVDAL 234          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHISS (Uroporphyrinogen decarboxylase OS=Shigella sonnei (strain Ss046) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHIFL (Uroporphyrinogen decarboxylase OS=Shigella flexneri GN=hemE PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHIF8 (Uroporphyrinogen decarboxylase OS=Shigella flexneri serotype 5b (strain 8401) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHIDS (Uroporphyrinogen decarboxylase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHIBS (Uroporphyrinogen decarboxylase OS=Shigella boydii serotype 4 (strain Sb227) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232          
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_SHIB3 (Uroporphyrinogen decarboxylase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232          
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_SHESA4.058e-3742.25Uroporphyrinogen decarboxylase OS=Shewanella sp. (... [more]
DCUP_KLEP34.058e-3742.25Uroporphyrinogen decarboxylase OS=Klebsiella pneum... [more]
DCUP_SHEON5.300e-3742.25Uroporphyrinogen decarboxylase OS=Shewanella oneid... [more]
DCUP_ALISL6.922e-3741.27Uroporphyrinogen decarboxylase OS=Aliivibrio salmo... [more]
DCUP_SHISS9.040e-3742.25Uroporphyrinogen decarboxylase OS=Shigella sonnei ... [more]
DCUP_SHIFL9.040e-3742.25Uroporphyrinogen decarboxylase OS=Shigella flexner... [more]
DCUP_SHIF89.040e-3742.25Uroporphyrinogen decarboxylase OS=Shigella flexner... [more]
DCUP_SHIDS9.040e-3742.25Uroporphyrinogen decarboxylase OS=Shigella dysente... [more]
DCUP_SHIBS9.040e-3742.25Uroporphyrinogen decarboxylase OS=Shigella boydii ... [more]
DCUP_SHIB39.040e-3742.25Uroporphyrinogen decarboxylase OS=Shigella boydii ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
back to top