EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_KLEP7 (Uroporphyrinogen decarboxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 78/187 (41.71%), Postives = 118/187 (63.10%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+ + A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ +++P+ LHALL K   S+  Y+  Q   GAQ+V IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVKSKADVDKLPIPDPEQELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALHALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOUT (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain UTI89 / UPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOSM (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOSE (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain SE11) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOLU (Uroporphyrinogen decarboxylase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOLI (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain K12) GN=hemE PE=1 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOLC (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOL6 (Uroporphyrinogen decarboxylase OS=Escherichia coli O6 GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOL5 (Uroporphyrinogen decarboxylase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOK1 (Uroporphyrinogen decarboxylase OS=Escherichia coli O1:K1 / APEC GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_KLEP79.040e-3741.71Uroporphyrinogen decarboxylase OS=Klebsiella pneum... [more]
DCUP_ECOUT9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOSM9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOSE9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOLU9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOLI9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOLC9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOL69.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOL59.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOK19.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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