EY674955

Overview
NameEY674955
Unique NameEY674955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOHS (Uroporphyrinogen decarboxylase OS=Escherichia coli O9:H4 (strain HS) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECODH (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain K12 / DH10B) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECOBW (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain K12 / BW2952) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECO8A (Uroporphyrinogen decarboxylase OS=Escherichia coli O8 (strain IAI1) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECO7I (Uroporphyrinogen decarboxylase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECO55 (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain 55989 / EAEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECO45 (Uroporphyrinogen decarboxylase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECO27 (Uroporphyrinogen decarboxylase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_ECO24 (Uroporphyrinogen decarboxylase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hemE PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.040e-37
Identity = 79/187 (42.25%), Postives = 116/187 (62.03%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQIVD 562
            F    +N +L  E++LQP   +  D  ILFSDILT    M +      G+GP    P+   A+VD++   DPE+ + YV  A+  +R E+  E  ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K   S+  Y+  Q   GAQAV IFD+W   L+  D+++FSL Y+ +IVD
Sbjct:   46 FMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVD 232
[Close]
BLAST of EY674955 vs. ExPASy Swiss-Prot
Match: DCUP_XYLFA (Uroporphyrinogen decarboxylase OS=Xylella fastidiosa GN=hemE PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.074e-36
Identity = 79/185 (42.70%), Postives = 115/185 (62.16%), Query Frame = 2 
Query:    2 FRETSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEKFSLPYLKQI 556
            F + ++  +L  EI+LQP H F  D  ILFSDIL     M +    I+G+GP +  PI   A + Q+   D E  + YV  A+ ++R+E++N   ++GF G+P+TLA Y++EGGSSK ++ IK +AF+ P VLH LL   T ++  Y+  Q   GAQA+Q+FD+W   LSP  +  FSLPYL +I
Sbjct:   44 FLKMAKTPELACEITLQPLHRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRYVMDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYAHIKAMAFNAPDVLHQLLNTVTNAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRI 228

HSP 2 Score: 21.9422 bits (45), Expect = 1.074e-36
Identity = 7/20 (35.00%), Postives = 13/20 (65.00%), Query Frame = 1 
Query:  628 LERLALNRVEVVSLEWAVEL 687
            +  LA++  E V ++W +EL
Sbjct:  254 IAELAMSGTEAVGVDWTIEL 273
The following BLAST results are available for this feature:
BLAST of EY674955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCUP_ECOHS9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECODH9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECOBW9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO8A9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO7I9.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO559.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO459.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO279.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_ECO249.040e-3742.25Uroporphyrinogen decarboxylase OS=Escherichia coli... [more]
DCUP_XYLFA1.074e-3642.70Uroporphyrinogen decarboxylase OS=Xylella fastidio... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-G09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674955 ID=EY674955; Name=EY674955; organism=Citrus sinensis; type=EST; length=983bp
ATTTCGTGAAACATCAGAAAATGTTGATCTTGTTGTGGAAATTTCTCTTC
AGCCGTGGCATGTTTTTAAGCCAGATGGTGTCATTTTATTCTCAGACATT
TTAACTCCTCTTTCTGGGATGAATATACCTTTTGACATTATCAAGGGTAA
GGGTCCTGTCATATTTGATCCTATAAACACAGATGCAGAAGTTGACCAAG
TGAGAGAATTTGATCCTGAGGAGTCAGTTCCATATGTTGGGAAAGCATTG
ACAATCTTGCGAGAAGAGGTAAACAATGAAGCAGCAGTTCTGGGTTTTGT
TGGGGCTCCTTTCACCCTGGCGTCATATGTGGTTGAGGGTGGTTCATCGA
AGCACTTCAGCAAAATAAAGCGACTAGCTTTCTCTCAACCCAAGGTCCTC
CATGCATTGCTTCGGAAATTTACAACCTCTATGGCAAAGTATGTACAATA
CCAAGCTGACAATGGAGCTCAAGCAGTTCAAATCTTCGATTCATGGGCCA
CGGAGCTCAGTCCTGTTGATTTTGAAAAGTTTAGTCTGCCTTACTTGAAG
CAAATTGTAGACACTGTGAAAACAACACCTTCCTGATCTCTCATAAATCC
TTTATGCCCATGGATCTGGTGGCCTTGCTTGAAAGGCTAGCTTTGAACAG
GGTGGAAGTTGTTAGCTTGGAATGGGCAGTTGAACTGGGGTGAAAGGGAA
ACGGGGAATTTGGGCCCCAAACTTTGGCATTTCAAGGGAAATGTCCAATC
CCGGGGGCCCTTTTTCGGTTTTAAAGGGACTTTCTTCCCCCAAACCCGGA
AAAAAATAAAAAACCCTGGAGGGGAAAACCCGGGGTGAAAAAGGGGAAAA
AAAAATTTTTTTTAAAAATTTTTGGGGGCCCCCGGGGCAATTAAAAAAAA
AAAGGGAAAACACCCCGGAAGAGAAAAAAAAAAGTTGTGTGGCTCCCCAT
TTATTTTTTTCCCTCTTCAAAGAAAGAATTTTC
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