EY674921

Overview
NameEY674921
Unique NameEY674921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURP0 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia pseudomallei (strain 1106a) GN=aat PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 5.787e-38
Identity = 80/141 (56.74%), Postives = 93/141 (65.96%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            P  E RVD  FA VM A   APR GQ GTWIT  +  AY + H AG  HSIETW+DG   GGLYG++ GRMFFGESM+  A +ASKIALA LV ++    V+ IDCQQ T HLASLG R + R  F+ HVR A   PP+ W
Sbjct:   90 PRWEIRVDCDFAGVMRACAQAPRRGQRGTWITAEIIDAYSSLHRAGDAHSIETWLDGRRVGGLYGVSFGRMFFGESMYAHASDASKIALAALVAHLREHRVEMIDCQQNTSHLASLGGREIARKTFVAHVRRAVAEPPIPW 230          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURVG (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=aat PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.684e-37
Identity = 79/138 (57.25%), Postives = 92/138 (66.67%), Query Frame = 2
Query:   20 ESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            E RVD  FA VM A   APR GQ GTWIT  +  AY + H +G  HSIETW DG   GGLYG+  GRMFFGESM+  A +ASKIALA LV ++  QG++ IDCQQ T HLASLG R + R  F+ HVR A   PP+ W
Sbjct:   93 EVRVDHDFAGVMRACAQAPRRGQRGTWITAEIIDAYTSLHRSGNAHSIETWHDGRRVGGLYGVAFGRMFFGESMYADATDASKIALATLVAHLRDQGLEMIDCQQNTSHLASLGGREIARKAFVAHVRRAAAEPPIPW 230          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_RALEH (Leucyl/phenylalanyl-tRNA--protein transferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=aat PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.199e-37
Identity = 79/137 (57.66%), Postives = 93/137 (67.88%), Query Frame = 2
Query:   20 ESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLA 427
            E RVD  F  VM A  + PRDGQ GTWIT  +  AY   H  G  HS+E+W  GE  GGLYG+ LGRMFFGESMF    +ASKIALA L  ++   GV  IDCQQ+T HLASLGARP+PR+ F+ HVRAAT  P ++
Sbjct:   93 EIRVDDDFLAVMRACATTPRDGQDGTWITDDIIAAYGTLHRNGMAHSVESWYRGERVGGLYGVALGRMFFGESMFAHRTDASKIALAALCAFLGNHGVAMIDCQQETDHLASLGARPIPRAEFVAHVRAATALPAIS 229          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_HERAR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Herminiimonas arsenicoxydans GN=aat PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.872e-37
Identity = 73/133 (54.89%), Postives = 92/133 (69.17%), Query Frame = 2
Query:   26 RVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPL 424
            R D AF  VM   +APR+G+ GTWI+  +   Y   H  GY HS E W+D EL GGLYG+++G MF+GESMFTR  +ASKIALAYLVR++ + GV  IDCQQQT HLASLGA P+ R+ F+  +R A   P +
Sbjct:   99 RFDHAFEDVMRACAAPRNGEAGTWISDDIIAGYTRLHRLGYAHSSELWLDDELVGGLYGVSIGNMFYGESMFTRVTDASKIALAYLVRFLGSHGVSMIDCQQQTAHLASLGAMPISRTEFISLLRQAIAAPQI 231          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURCM (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=aat PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.751e-37
Identity = 79/141 (56.03%), Postives = 93/141 (65.96%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            P  E RVD  FA VM A   APR GQ GTWIT  +  AY + + +G  HSIETW DG   GGLYG+  GRMFFGESM+  A +ASKIALA LV ++  QG++ IDCQQ T HLASLG R + R  F+ HVR A   PP+ W
Sbjct:   90 PAWEVRVDHDFAGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRIGGLYGVAFGRMFFGESMYADATDASKIALATLVAHLREQGLEMIDCQQNTSHLASLGGREIARKAFVAHVRRAVAEPPIPW 230          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURA4 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia ambifaria (strain MC40-6) GN=aat PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.751e-37
Identity = 79/141 (56.03%), Postives = 93/141 (65.96%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            P  E RVD  FA VM A   APR GQ GTWIT  +  AY + + +G  HSIETW DG   GGLYG+  GRMFFGESM+  A +ASKIALA LV ++  QG++ IDCQQ T HLASLG R + R  F+ HVR A   PP+ W
Sbjct:   90 PAWEVRVDHDFAGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRIGGLYGVAFGRMFFGESMYADATDASKIALATLVAHLREQGLEMIDCQQNTSHLASLGGREIARKAFVAHVRRAVAEPPIPW 230          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_RALPJ (Leucyl/phenylalanyl-tRNA--protein transferase OS=Ralstonia pickettii (strain 12J) GN=aat PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 4.899e-37
Identity = 78/139 (56.12%), Postives = 93/139 (66.91%), Query Frame = 2
Query:   11 PGPESRVDTAFA-TVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPL 424
            P  E R+D AF  T++A  +  R GQ GTWIT  + QAY A H  GY HS+ETW  G+  GGLYG+ LGRMF+GESMF    +ASKIALA L  ++  QGV  IDCQQ+T HLASLG  PVPR+ FL HVR A   P +
Sbjct:   90 PAWEIRIDHAFRETMVACATTARPGQHGTWITEDVIQAYTALHRRGYAHSVETWHAGQRVGGLYGVALGRMFYGESMFAHRTDASKIALAALCAFLGGQGVAMIDCQQETEHLASLGGAPVPRAAFLAHVREAASAPAI 228          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURS3 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia sp. (strain 383) GN=aat PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 4.899e-37
Identity = 78/141 (55.32%), Postives = 94/141 (66.67%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            P  E RVD  F  VM A   APR GQ GTWIT  +  AY + + +G  HSIETW DG   GGLYG++ GRMFFGESM+  A +ASKIALA LV ++  QG++ IDCQQ T HLASLG R + R  F+ HVR+A   PP+ W
Sbjct:   90 PEWEVRVDHDFPGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRMFFGESMYADATDASKIALATLVAHLREQGLEMIDCQQNTSHLASLGGREIARKAFVAHVRSAVAEPPIPW 230          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURCC (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia cenocepacia (strain MC0-3) GN=aat PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 4.899e-37
Identity = 77/141 (54.61%), Postives = 94/141 (66.67%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            P  E RVD  FA VM A   APR GQ GTWIT  +  AY + + +G  HSIETW DG   GGLYG++ GRMFFGESM+    +ASKIALA L+ ++  QG++ IDCQQ T HLASLG R + R  F+ HVR+A   PP+ W
Sbjct:   90 PEWEVRVDHDFAGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRMFFGESMYADVTDASKIALAALIAHLREQGLEMIDCQQNTSHLASLGGREIARKAFVAHVRSAVAEPPIPW 230          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURCJ (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=aat PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.091e-36
Identity = 77/141 (54.61%), Postives = 93/141 (65.96%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            P  E RVD  F  VM A   APR GQ GTWIT  +  AY + + +G  HSIETW DG   GGLYG++ GRMFFGESM+    +ASKIALA LV ++  QG++ IDCQQ T HLASLG R + R  F+ HVR+A   PP+ W
Sbjct:   90 PDWEVRVDHDFPGVMRACAQAPRRGQRGTWITAEIIDAYTSLYRSGNAHSIETWHDGRRVGGLYGVSFGRMFFGESMYADVTDASKIALATLVAHLREQGLEMIDCQQNTSHLASLGGREIARKAFVAHVRSAVAEPPIPW 230          
The following BLAST results are available for this feature:
BLAST of EY674921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_BURP05.787e-3856.74Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BURVG1.684e-3757.25Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_RALEH2.199e-3757.66Leucyl/phenylalanyl-tRNA--protein transferase OS=R... [more]
LFTR_HERAR2.872e-3754.89Leucyl/phenylalanyl-tRNA--protein transferase OS=H... [more]
LFTR_BURCM3.751e-3756.03Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BURA43.751e-3756.03Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_RALPJ4.899e-3756.12Leucyl/phenylalanyl-tRNA--protein transferase OS=R... [more]
LFTR_BURS34.899e-3755.32Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BURCC4.899e-3754.61Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BURCJ1.091e-3654.61Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674921 ID=EY674921; Name=EY674921; organism=Citrus sinensis; type=EST; length=470bp
CCGGGCGGTTCCGGGTCCGGAATCCCGGGTCGACACGGCCTTCGCCACGG
TGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAGCCGGGCACCTGGATC
ACCCCCGCCATGCGGCAGGCCTACCTCGCCTGGCACGAGGCCGGCTACGT
CCACAGCATCGAAACCTGGATCGACGGCGAACTGGCCGGCGGCCTGTACG
GCATCAACCTGGGCCGCATGTTCTTCGGCGAATCGATGTTCACGCGCGCG
CCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGTGCGCTACGTCAGCGC
GCAGGGCGTGCAGTGGATCGACTGCCAGCAGCAGACCCGCCATCTGGCCA
GCCTGGGCGCGCGGCCGGTGCCACGCTCGCGCTTCCTGCAACACGTGCGC
GCCGCCACCGTGCACCCGCCGCTGGCCTGGTCGCGCGGACGGCTGGACAG
CACGGGGCGGCTGCTGCCCC
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