EY674921

Overview
NameEY674921
Unique NameEY674921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_NITMU (Leucyl/phenylalanyl-tRNA--protein transferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=aat PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.586e-35
Identity = 72/127 (56.69%), Postives = 86/127 (67.72%), Query Frame = 2
Query:   20 ESRVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVR 400
            E R D  F  VM   +APR    GTWI   M  AY A HE G+ HS+ETW+DGEL GGLYG+ LGR+FFGESMF+R  NASKIA  +LVR +   G + IDCQ +T HLASLGAR +PR  F Q ++
Sbjct:   86 EIRTDRNFTPVMRACAAPRRDSCGTWIQNKMIFAYSALHEMGFAHSVETWMDGELVGGLYGVALGRVFFGESMFSRVSNASKIAFVHLVRQLERWGFEMIDCQMKTAHLASLGAREIPREEFSQRLK 212          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURM1 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=aat PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.586e-35
Identity = 75/141 (53.19%), Postives = 90/141 (63.83%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAW 430
            P  E RVD  F  VM A   APR GQ GTWIT  +  AY + + +G  HSIETW DG   GGLYG+  G+MFFGESM+    +ASKIALA LV ++   G++ IDCQQ T HLASLG R + R  F+ HVR A   PP+ W
Sbjct:   90 PAWEVRVDHDFRGVMRACAQAPRRGQRGTWITAEIIDAYSSLYRSGNAHSIETWHDGRRVGGLYGVAFGQMFFGESMYADVTDASKIALAALVAHLREHGLEMIDCQQNTSHLASLGGREIARKAFVAHVRRAVAEPPIPW 230          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_RALME (Leucyl/phenylalanyl-tRNA--protein transferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=aat PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.989e-35
Identity = 75/131 (57.25%), Postives = 87/131 (66.41%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVR 400
            P  E RVD  F  VM A    PRDGQ GTWIT  +  AY + H  G  HS+ETW  GE  GGLYG+ LGRMF+GESMF    +ASKIALA L  ++   GV  IDCQQ+T HLASLGA P+PR +F+ HVR
Sbjct:   90 PDWEIRVDDDFVAVMQACAMTPRDGQLGTWITDDIVAAYGSLHRLGLAHSVETWYRGERVGGLYGVALGRMFYGESMFAHRTDASKIALAALCGFLERHGVTMIDCQQETDHLASLGAEPIPREQFIAHVR 220          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_THIDA (Leucyl/phenylalanyl-tRNA--protein transferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=aat PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 7.822e-35
Identity = 72/124 (58.06%), Postives = 87/124 (70.16%), Query Frame = 2
Query:   14 GPESRVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRF 385
            G E RVD+AF  VM    APR+G  GTWI+  M  AY    +AGY HSIETW DG L GGLYG+ +GRMF+GESMF+R P+ASK+AL  L R +   G   IDCQ +T HLAS+GARP+PR+ F
Sbjct:   84 GFELRVDSAFIEVMRACGAPREGAWGTWISAPMIAAYGRLFDAGYAHSIETWRDGRLVGGLYGVAIGRMFYGESMFSREPDASKVALVRLARQLERWGFGLIDCQMETPHLASMGARPIPRADF 207          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_POLSJ (Leucyl/phenylalanyl-tRNA--protein transferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=aat PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 7.822e-35
Identity = 74/130 (56.92%), Postives = 90/130 (69.23%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHV 397
            P  E + D+AF  V+ A  S PR GQPGTWI P M QAY + H AGY HS+ETW+ G+L GGLY + LGRM FGESMF    +ASKIALA LV +  A  +  IDCQQ TRHLASLGA  + R+ F++H+
Sbjct:   96 PECEIKFDSAFEHVIKACASQPRAGQPGTWIVPDMVQAYSSLHRAGYAHSVETWVRGKLVGGLYCVKLGRMVFGESMFAHQTDASKIALAALVGFCRAHQIAMIDCQQNTRHLASLGAAEIDRADFVRHL 225          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_NITEU (Leucyl/phenylalanyl-tRNA--protein transferase OS=Nitrosomonas europaea GN=aat PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 7.822e-35
Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 2
Query:   26 RVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHP 418
            R D+AF  VM   +APR+ Q GTWI   M  AY A H+ G  HS+ETWI+GELAGGLYG+ +GR FFGESMF+RA +ASKIAL +L R +   G   IDCQ +T HL S+GAR +PRS+F + +      P
Sbjct:   88 RTDSAFTEVMQACAAPREDQAGTWIHEEMIAAYTALHQMGVAHSVETWIEGELAGGLYGVAIGRAFFGESMFSRATDASKIALVHLARQLENWGYGLIDCQMKTAHLMSMGAREIPRSQFSKRLNQLNALP 218          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_JANMA (Leucyl/phenylalanyl-tRNA--protein transferase OS=Janthinobacterium sp. (strain Marseille) GN=aat PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.743e-34
Identity = 67/136 (49.26%), Postives = 91/136 (66.91%), Query Frame = 2
Query:   20 ESRVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLA 427
            E R D AF  VM   +APR+G+ GTWI+  +   Y   H+ GY HS E W+ G+L G  YG+++G+MF+GESMF R P+ASKIALAYLV ++    V  IDCQQ+T HLA+LGA P+ R+ F+  +R A   P ++
Sbjct:   98 EIRFDHAFEEVMRACAAPRNGEGGTWISDEIIAGYTGLHKLGYAHSSELWLQGKLVGAAYGVSIGQMFYGESMFARVPDASKIALAYLVHFLRNHDVSMIDCQQETSHLATLGAAPIARTEFISRLRQAVSGPQIS 233          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_RHOFD (Leucyl/phenylalanyl-tRNA--protein transferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=aat PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 5.070e-34
Identity = 76/145 (52.41%), Postives = 93/145 (64.14%), Query Frame = 2
Query:   11 PGPESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGR 442
            PG E R+D+AF  V+ A  S+ R GQ GTWI P MR AY   H  G  HS+ETW++GELAGGLY + LG+  FGESMF+R  +ASKIALA L+ +    GV+ IDCQQ T HLASLGA  + R  FL+ + A       AW   R
Sbjct:   96 PGCEIRIDSAFEQVIEACASSARIGQSGTWIVPDMRAAYGELHRVGLAHSVETWVNGELAGGLYCVALGKAVFGESMFSRVSDASKIALAALIGFCRHHGVKQIDCQQNTPHLASLGAGEISRDLFLKGLAAGLAEAGPAWEFDR 240          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_LARHH (Leucyl/phenylalanyl-tRNA--protein transferase OS=Laribacter hongkongensis (strain HLHK9) GN=aat PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.475e-33
Identity = 65/130 (50.00%), Postives = 85/130 (65.38%), Query Frame = 2
Query:   29 VDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHP 418
            VD AF +V+   +AP   +P +WITP +   Y   +  G  HS+ETWIDG+LAGG YG+ +GRMF+GESMF +AP+ASKIA A+L+R  +  G+  IDCQ  T HLA  G R +PRS F+  V   T  P
Sbjct:   89 VDRAFGSVIRACAAPTPARPASWITPEIISTYSQLYRLGLAHSVETWIDGQLAGGFYGVMIGRMFYGESMFAQAPDASKIAFAHLMRRFAGHGIDMIDCQMHTAHLARFGGREIPRSDFVATVNTLTAQP 218          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BURP8 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=aat PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.475e-33
Identity = 73/139 (52.52%), Postives = 88/139 (63.31%), Query Frame = 2
Query:   20 ESRVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWS 433
            E RVD  F  VM A   APR GQ GTWIT  +  AY   H  G  HSIETW  G+  GGLYG++ G+MFFGESM+    +ASKIAL+ LV ++    ++ IDCQQ T HLASLG R + R  F+ HVRAA    P+ WS
Sbjct:   93 EIRVDADFPAVMRACALAPRHGQRGTWITSDVIDAYSTLHRRGEAHSIETWHAGKRVGGLYGVSFGKMFFGESMYAEVTDASKIALSALVFHLRRHEIEMIDCQQNTSHLASLGGREIARKAFVAHVRAAVDSAPIPWS 231          
The following BLAST results are available for this feature:
BLAST of EY674921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_NITMU4.586e-3556.69Leucyl/phenylalanyl-tRNA--protein transferase OS=N... [more]
LFTR_BURM14.586e-3553.19Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_RALME5.989e-3557.25Leucyl/phenylalanyl-tRNA--protein transferase OS=R... [more]
LFTR_THIDA7.822e-3558.06Leucyl/phenylalanyl-tRNA--protein transferase OS=T... [more]
LFTR_POLSJ7.822e-3556.92Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_NITEU7.822e-3554.20Leucyl/phenylalanyl-tRNA--protein transferase OS=N... [more]
LFTR_JANMA1.743e-3449.26Leucyl/phenylalanyl-tRNA--protein transferase OS=J... [more]
LFTR_RHOFD5.070e-3452.41Leucyl/phenylalanyl-tRNA--protein transferase OS=R... [more]
LFTR_LARHH1.475e-3350.00Leucyl/phenylalanyl-tRNA--protein transferase OS=L... [more]
LFTR_BURP81.475e-3352.52Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674921 ID=EY674921; Name=EY674921; organism=Citrus sinensis; type=EST; length=470bp
CCGGGCGGTTCCGGGTCCGGAATCCCGGGTCGACACGGCCTTCGCCACGG
TGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAGCCGGGCACCTGGATC
ACCCCCGCCATGCGGCAGGCCTACCTCGCCTGGCACGAGGCCGGCTACGT
CCACAGCATCGAAACCTGGATCGACGGCGAACTGGCCGGCGGCCTGTACG
GCATCAACCTGGGCCGCATGTTCTTCGGCGAATCGATGTTCACGCGCGCG
CCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGTGCGCTACGTCAGCGC
GCAGGGCGTGCAGTGGATCGACTGCCAGCAGCAGACCCGCCATCTGGCCA
GCCTGGGCGCGCGGCCGGTGCCACGCTCGCGCTTCCTGCAACACGTGCGC
GCCGCCACCGTGCACCCGCCGCTGGCCTGGTCGCGCGGACGGCTGGACAG
CACGGGGCGGCTGCTGCCCC
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